Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051809
CDS Infomation

pacid=37454317 polypeptide=PGSC0003DMP400034881 locus=PGSC0003DMG400020107 ID=PGSC0003DMT400051809.v4.03 annot-version=v4.03
Sequence

ATGGACGAGGATTTTGGTATTCCACCGGTAGAGGGAATGAACGAGGACATGGATCTGCCG
GATGACAGTTCGACCCTGAAAGTAGGCGAGGAGAAGGAAATTGGAAATCAGGGATTGAAG
AAGAAGCTTGTTAAGGAAGGTGAAGGTTGGGATACTCCTGCGCCTGGTGATGAAGTCGAA
GTTCATTATACTGGAACTTTGCTTGACGGAACCAAGTTCGATTCCAGTCGCGATAGAGGG
GACCCCTTCAAGTTTACTCTCGGTCAAGGACAAGTTATTAAAGGATGGGATCAAGGTATA
AATACAATGAAGAAAGGTGAAAATGCTATTTTCACCATTCCTCCAGAGCTTGCTTATGGA
GAGAGTGGTTCTCCTCCAACTATCCCTCCAAATGCCACTCTACAATTTGATGTTGAGTTG
CTATCATGGGTGAGTGTAAAAGACATTTGCAAGGATGGTGGAATTTTCAAAAAGATCCTC
ACAGAGGGGGAGAAATGGGAAAACCCGAAAGATCTTGACGAAGTATTTGTCAAGTACGAA
GCTCAGCTCGAAAATGGCACAGTGGTGGGAAAATCAGATGGAGTGGAGTTCACTGTTCAA
GATGGTCATTTCTGTCCTGCTCTTGCTAAGGCTGTGAAAACTATGAAGAAAGGTGAAAAG
GTCCAATTGACAGTTAAGCCGCAATATGGCTTTGGAGAGAAAGGAAAACCAGCCTCAAGT
GATGGAGGAGCAGTTCCACCTAATGCCACATTACAGATCAACTTGGAGTTGGTCTCGTGG
AAAACTGTTTCAAATGTTACTGATGACAAGAAAGTATTAAAGAAGATCTTGAAAGAAGGG
GAAGGATATGAGAGACCCAATGAAGGAGCTGTTGTTAAATTAAAACTGGTTGGCAAGCTG
CTGGATGGCACAGTCTTCACAAAGAAGGGCCATGATGGGGAAAATGAAGACAACCTTTTT
GAGTTTAAGACAGATGAGGAACAAGTAATAGATGGGCTAGACAGAGCTGTCATGACAATG
AAGAAGGGTGAAGCGGCGCTGCTTACAATTGCACCTGAATATGCCTTTGGTTCATCTGAG
TCAAAGCAAGATTTAGCTGTTGTTCCTCCTAATTCAACTGTGCATTATGAGGTTGAGCTT
GTTTCTTTTGTCAAGGACAAGGAATCATGGGATATGAATACCCCGGAGAAAATTGAGGCT
GCTGGCAAAAAGAAAGAAGAAGGGAATGCACTGTTCAAGGCTGGTAAATACGCAAGGGCA
TCTAAGAGATATGAGAAGGCTGCTAAATTCATCGAGTATGATACTTCCTTCAGCGAGGAG
GAAAAGAAACAGTCTAAAGCATTGAAGATCACCTGCAACTTAAATAATGCAGCTTGCAAG
CTGAAATTGAAAGATTACAAGCAGGCCGAGAAACTGTGTACCAAGGTGTTGGAACTGGAT
AGCGCAAATGTCAAAGCTCTTTACCGCAGAGCTCAAGCATATATGAACATGGCTGATCTT
GATCTGGCTGAATTTGACATTAAGAAAGCTCTTGAGATTGACCCTGACAACAGGGATGTG
AAGCTTGAGTACAAAGCTCTAAAGGAAAAAGTCAAGGAAATTAACAAGAAGGATGCAAAG
TTCTATGGAAACATGTTTGCAAAGTTGAATAAGCAGGATGCAGCAAACTCAGCCAACTCT
GCTGCCAAGGAACCAGAACCGATGAGCATTGATAGCAAGGCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400034881
PEP Infomation

pacid=37454317 transcript=PGSC0003DMT400051809 locus=PGSC0003DMG400020107 ID=PGSC0003DMT400051809.v4.03 annot-version=v4.03
Sequence

MDEDFGIPPVEGMNEDMDLPDDSSTLKVGEEKEIGNQGLKKKLVKEGEGWDTPAPGDEVE
VHYTGTLLDGTKFDSSRDRGDPFKFTLGQGQVIKGWDQGINTMKKGENAIFTIPPELAYG
ESGSPPTIPPNATLQFDVELLSWVSVKDICKDGGIFKKILTEGEKWENPKDLDEVFVKYE
AQLENGTVVGKSDGVEFTVQDGHFCPALAKAVKTMKKGEKVQLTVKPQYGFGEKGKPASS
DGGAVPPNATLQINLELVSWKTVSNVTDDKKVLKKILKEGEGYERPNEGAVVKLKLVGKL
LDGTVFTKKGHDGENEDNLFEFKTDEEQVIDGLDRAVMTMKKGEAALLTIAPEYAFGSSE
SKQDLAVVPPNSTVHYEVELVSFVKDKESWDMNTPEKIEAAGKKKEEGNALFKAGKYARA
SKRYEKAAKFIEYDTSFSEEEKKQSKALKITCNLNNAACKLKLKDYKQAEKLCTKVLELD
SANVKALYRRAQAYMNMADLDLAEFDIKKALEIDPDNRDVKLEYKALKEKVKEINKKDAK
FYGNMFAKLNKQDAANSANSAAKEPEPMSIDSKA*

Transcript Sequence

Transcript ID

PGSC0003DMT400051809
Transcript Infomation

pacid=37454317 locus=PGSC0003DMG400020107 ID=PGSC0003DMT400051809.v4.03 annot-version=v4.03
Sequence

ATGGACGAGGATTTTGGTATTCCACCGGTAGAGGGAATGAACGAGGACATGGATCTGCCG
GATGACAGTTCGACCCTGAAAGTAGGCGAGGAGAAGGAAATTGGAAATCAGGGATTGAAG
AAGAAGCTTGTTAAGGAAGGTGAAGGTTGGGATACTCCTGCGCCTGGTGATGAAGTCGAA
GTTCATTATACTGGAACTTTGCTTGACGGAACCAAGTTCGATTCCAGTCGCGATAGAGGG
GACCCCTTCAAGTTTACTCTCGGTCAAGGACAAGTTATTAAAGGATGGGATCAAGGTATA
AATACAATGAAGAAAGGTGAAAATGCTATTTTCACCATTCCTCCAGAGCTTGCTTATGGA
GAGAGTGGTTCTCCTCCAACTATCCCTCCAAATGCCACTCTACAATTTGATGTTGAGTTG
CTATCATGGGTGAGTGTAAAAGACATTTGCAAGGATGGTGGAATTTTCAAAAAGATCCTC
ACAGAGGGGGAGAAATGGGAAAACCCGAAAGATCTTGACGAAGTATTTGTCAAGTACGAA
GCTCAGCTCGAAAATGGCACAGTGGTGGGAAAATCAGATGGAGTGGAGTTCACTGTTCAA
GATGGTCATTTCTGTCCTGCTCTTGCTAAGGCTGTGAAAACTATGAAGAAAGGTGAAAAG
GTCCAATTGACAGTTAAGCCGCAATATGGCTTTGGAGAGAAAGGAAAACCAGCCTCAAGT
GATGGAGGAGCAGTTCCACCTAATGCCACATTACAGATCAACTTGGAGTTGGTCTCGTGG
AAAACTGTTTCAAATGTTACTGATGACAAGAAAGTATTAAAGAAGATCTTGAAAGAAGGG
GAAGGATATGAGAGACCCAATGAAGGAGCTGTTGTTAAATTAAAACTGGTTGGCAAGCTG
CTGGATGGCACAGTCTTCACAAAGAAGGGCCATGATGGGGAAAATGAAGACAACCTTTTT
GAGTTTAAGACAGATGAGGAACAAGTAATAGATGGGCTAGACAGAGCTGTCATGACAATG
AAGAAGGGTGAAGCGGCGCTGCTTACAATTGCACCTGAATATGCCTTTGGTTCATCTGAG
TCAAAGCAAGATTTAGCTGTTGTTCCTCCTAATTCAACTGTGCATTATGAGGTTGAGCTT
GTTTCTTTTGTCAAGGACAAGGAATCATGGGATATGAATACCCCGGAGAAAATTGAGGCT
GCTGGCAAAAAGAAAGAAGAAGGGAATGCACTGTTCAAGGCTGGTAAATACGCAAGGGCA
TCTAAGAGATATGAGAAGGCTGCTAAATTCATCGAGTATGATACTTCCTTCAGCGAGGAG
GAAAAGAAACAGTCTAAAGCATTGAAGATCACCTGCAACTTAAATAATGCAGCTTGCAAG
CTGAAATTGAAAGATTACAAGCAGGCCGAGAAACTGTGTACCAAGGTGTTGGAACTGGAT
AGCGCAAATGTCAAAGCTCTTTACCGCAGAGCTCAAGCATATATGAACATGGCTGATCTT
GATCTGGCTGAATTTGACATTAAGAAAGCTCTTGAGATTGACCCTGACAACAGGGATGTG
AAGCTTGAGTACAAAGCTCTAAAGGAAAAAGTCAAGGAAATTAACAAGAAGGATGCAAAG
TTCTATGGAAACATGTTTGCAAAGTTGAATAAGCAGGATGCAGCAAACTCAGCCAACTCT
GCTGCCAAGGAACCAGAACCGATGAGCATTGATAGCAAGGCATAA