Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051788
CDS Infomation

pacid=37450877 polypeptide=PGSC0003DMP400034866 locus=PGSC0003DMG400020098 ID=PGSC0003DMT400051788.v4.03 annot-version=v4.03
Sequence

ATGGCTACTCCTTCATCTCCCCCACCCCTCCTCCTCCCACCTCCTGAATCAAATCAACCC
CAAATCTCCCCAAACCCCCTAATCCCATCACCCCAGAAAAAAACTCAACCTATACCATGG
ACCCATCAAGAAACTTTCAATTTAATCCAAGCTTATCAGGAAAAATGGTACTCTCTCAAA
AAGGGTCAGCTCAAAGCTAGCCAATGGGAAGAAGTCGCCATTACAGTCGCAGCTCGTTGC
GGCTTCGATGAGCCGTCGAAATCCGCTACCCAATGTCGTCACAAGATCGAGAAGCTCCGG
AAACGTTATCGGGCCGAGAGACTCAAACCCTACCCGAATTCCTGGCAGTATTTTGATCTA
ATGGACCGTATGGAACGTGGGCCTTTACCGATTGCTGCTCATCCTGTTGCAATGGTGAAA
TGCCAGAATTCGAATTCTACGTCTGATCAGAGGTATTATGATACTGATAGTGATGAGGTT
GATGTTAGTTTTATGGATTTGAGGAAAAATAAGTGTAAAAGTATTAATCATATTGTTCGT
GGTGAAATGGGTATGATGGGTGTTAATGTTGTTGCTGATAATAGAAATATGAATAGGATG
GTGAAAGATCGAAACTTTGACCCTATGAGAGGGATGAGGAATACAATGAATGAGAAAAGA
AAAGGGTATTTCGAGAATGTAGGTATTAATAACGATGATGATGATAATGTTGAGGAAGAG
GTGGATGAAGAGGAAGACGACGAGGATGGAGAAGGAAGCGTTGGAGGGAGTGAATTAGCT
GCAGAGATAAGGGGATTTGCCGAGAGGTTTATGAGAATGGAGAGTAAAAAGATTGAGATG
ATGAAGGAGACAGAGAGGTTTAGGATGGAAATGGAGAAAAGGAGAATGGAAATGATTCTT
GAAACACAGAGGAATCTAATTGATACTATCAATAGTGTCGTTGGATCGCATAAGAAAGTG
AAGGTTGCTCATGAATTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400034866
PEP Infomation

pacid=37450877 transcript=PGSC0003DMT400051788 locus=PGSC0003DMG400020098 ID=PGSC0003DMT400051788.v4.03 annot-version=v4.03
Sequence

MATPSSPPPLLLPPPESNQPQISPNPLIPSPQKKTQPIPWTHQETFNLIQAYQEKWYSLK
KGQLKASQWEEVAITVAARCGFDEPSKSATQCRHKIEKLRKRYRAERLKPYPNSWQYFDL
MDRMERGPLPIAAHPVAMVKCQNSNSTSDQRYYDTDSDEVDVSFMDLRKNKCKSINHIVR
GEMGMMGVNVVADNRNMNRMVKDRNFDPMRGMRNTMNEKRKGYFENVGINNDDDDNVEEE
VDEEEDDEDGEGSVGGSELAAEIRGFAERFMRMESKKIEMMKETERFRMEMEKRRMEMIL
ETQRNLIDTINSVVGSHKKVKVAHEF*

Transcript Sequence

Transcript ID

PGSC0003DMT400051788
Transcript Infomation

pacid=37450877 locus=PGSC0003DMG400020098 ID=PGSC0003DMT400051788.v4.03 annot-version=v4.03
Sequence

ATGGCTACTCCTTCATCTCCCCCACCCCTCCTCCTCCCACCTCCTGAATCAAATCAACCC
CAAATCTCCCCAAACCCCCTAATCCCATCACCCCAGAAAAAAACTCAACCTATACCATGG
ACCCATCAAGAAACTTTCAATTTAATCCAAGCTTATCAGGAAAAATGGTACTCTCTCAAA
AAGGGTCAGCTCAAAGCTAGCCAATGGGAAGAAGTCGCCATTACAGTCGCAGCTCGTTGC
GGCTTCGATGAGCCGTCGAAATCCGCTACCCAATGTCGTCACAAGATCGAGAAGCTCCGG
AAACGTTATCGGGCCGAGAGACTCAAACCCTACCCGAATTCCTGGCAGTATTTTGATCTA
ATGGACCGTATGGAACGTGGGCCTTTACCGATTGCTGCTCATCCTGTTGCAATGGTGAAA
TGCCAGAATTCGAATTCTACGTCTGATCAGAGGTATTATGATACTGATAGTGATGAGGTT
GATGTTAGTTTTATGGATTTGAGGAAAAATAAGTGTAAAAGTATTAATCATATTGTTCGT
GGTGAAATGGGTATGATGGGTGTTAATGTTGTTGCTGATAATAGAAATATGAATAGGATG
GTGAAAGATCGAAACTTTGACCCTATGAGAGGGATGAGGAATACAATGAATGAGAAAAGA
AAAGGGTATTTCGAGAATGTAGGTATTAATAACGATGATGATGATAATGTTGAGGAAGAG
GTGGATGAAGAGGAAGACGACGAGGATGGAGAAGGAAGCGTTGGAGGGAGTGAATTAGCT
GCAGAGATAAGGGGATTTGCCGAGAGGTTTATGAGAATGGAGAGTAAAAAGATTGAGATG
ATGAAGGAGACAGAGAGGTTTAGGATGGAAATGGAGAAAAGGAGAATGGAAATGATTCTT
GAAACACAGAGGAATCTAATTGATACTATCAATAGTGTCGTTGGATCGCATAAGAAAGTG
AAGGTTGCTCATGAATTTTGA