Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051746
CDS Infomation

pacid=37451442 polypeptide=PGSC0003DMP400034841 locus=PGSC0003DMG400020088 ID=PGSC0003DMT400051746.v4.03 annot-version=v4.03
Sequence

ATGAAAAGGGAGTTAAATGAGGTTTATTATGGTGTCAACAAAGAAGATGTGCATGGATTT
GAGAATATTAATATGGTGCCTACTGATTTTGATCCTATGGATGATACAGATATTTGGCTA
AATGGAAATTTCTCTAATGATTTTACTTCTCTTCAAGATTTTCCATGCATGTCGTCTTCA
TCATCAACTTCCAATTCCCTTCCTACTGAACAATCTGATCCATGTTCTAGTTGGGCTGTT
CAAAAATCTGATGGTGATGAACAAAATTTCGACACAATTAGTGATCAAGAATGTCTAAAT
GTGATGGATTTAATTGACGGGGATCATGAATTTCTTGACCCTGTGATCTCTTTTTTCCAT
AGTGGAGAAAATCAACAACAAAAAGAGCAAGCAAATGATGAGCAAGTGTCTATTTTTCAA
GGGGATAGTGAGCTTGCGCTTATGTTTTTGGAATGGTTAAAGCAAAACAAAGATAACATT
TCTGCTGAAGACATGAGGAGTATTAAGCTTAAACGTTCGACAATTGAAAGCGCGTCGAAG
CGATTGGGAAGTACTAAAGAAGGGAAAAAACAGTTGTTGAGGCTCATTCTTGATTGGGTT
GAACAACATAGATTGCAAAAGAAACAAATGAGAGTAGAACAGAGTATCCAAAACTCTGCC
CCTTTTAACTTTAATAATCCAAATGCTTGCTTATATAATGCCTCGTTCCCCGATTCGTCC
CCTGTAATGACAGGGCCAATACAGGGGTACATTGGTGATCTGTATTCTAATGGATCTTTA
TTCGCGCCTCCTTATAATCAAACAATGAGTGGAAGTGCAACTTCTCGGTCTTGGTCTCCA
TCGCAATTTACAATGGCGACCGCTTCTCAATACAATCCATTTCCTGATAATGATAGTACT
GATAATGTTGCTATACCTGATCAGCCTTTATTCAGTGCTCAATATGATCCGTACCAAGTT
TTCGATGGGAACAGTGAGAGATTGGCAAGGTTGGGCACTTGTGCTACTAAAGAAGCTAGG
AAGAACAGAATGGCTAGGCAGAGACGAGTACCGTTGCATCATTATCGCCATCAGACTCAG
AATCAAAGACAAATTAGTAATGAGAAAAGTGTAATGATGGGTGGAAAGATTAATAATTGT
GCAATGTCTCGAGCTAACAGTCTAGGAAATTGGGTATATTGGCCTTGTGCTGCTGCTGCT
CCGCCAATCGCCATGGTTCCATTGGCTGATACTCCGCAAGCACTTCCTATGGAGAGGCCA
GCGGTGCAATCACAAAAACATGGTTCGACAGACAAAAGACAGGCTTGCAAAACAGAGAAG
AATCTCAAATTTCTCCTGCAAAAAGTGCTGAAGCAAAGTGATGTTGGCAATCTAGGAAGA
ATTGTGTTACCAAAGAAAGAAGCAGAAAGTCATCTCCCCCAACTTGAAACAAGAGATGGA
ATCTCAATTGCCATGGAAGACATTGGAACTTCTCGTGTTTGGAACATGAAATATAGATTT
TGGCCAAATAACAAAAGCAGGATGTACCTTCTCGAGAACACAGGTGATTTTGTCCTAGCT
AATGGACTTCAAGAAGGTGATTTCATTGTAATATACGCCGACATAAAGTGTGGCAAATAT
TTGATACGAGGAGTAAAAGTGAGGCCGAATGGAGCAAAATCAGACAGCACGCAGCCAGCA
AAGAAAATCGTTCGTAAAATAGCTGCTGTTGATTCATCTCCATTTGCACAAGCTGTTCGA
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400034841
PEP Infomation

pacid=37451442 transcript=PGSC0003DMT400051746 locus=PGSC0003DMG400020088 ID=PGSC0003DMT400051746.v4.03 annot-version=v4.03
Sequence

MKRELNEVYYGVNKEDVHGFENINMVPTDFDPMDDTDIWLNGNFSNDFTSLQDFPCMSSS
SSTSNSLPTEQSDPCSSWAVQKSDGDEQNFDTISDQECLNVMDLIDGDHEFLDPVISFFH
SGENQQQKEQANDEQVSIFQGDSELALMFLEWLKQNKDNISAEDMRSIKLKRSTIESASK
RLGSTKEGKKQLLRLILDWVEQHRLQKKQMRVEQSIQNSAPFNFNNPNACLYNASFPDSS
PVMTGPIQGYIGDLYSNGSLFAPPYNQTMSGSATSRSWSPSQFTMATASQYNPFPDNDST
DNVAIPDQPLFSAQYDPYQVFDGNSERLARLGTCATKEARKNRMARQRRVPLHHYRHQTQ
NQRQISNEKSVMMGGKINNCAMSRANSLGNWVYWPCAAAAPPIAMVPLADTPQALPMERP
AVQSQKHGSTDKRQACKTEKNLKFLLQKVLKQSDVGNLGRIVLPKKEAESHLPQLETRDG
ISIAMEDIGTSRVWNMKYRFWPNNKSRMYLLENTGDFVLANGLQEGDFIVIYADIKCGKY
LIRGVKVRPNGAKSDSTQPAKKIVRKIAAVDSSPFAQAVR*

Transcript Sequence

Transcript ID

PGSC0003DMT400051746
Transcript Infomation

pacid=37451442 locus=PGSC0003DMG400020088 ID=PGSC0003DMT400051746.v4.03 annot-version=v4.03
Sequence

ATGAAAAGGGAGTTAAATGAGGTTTATTATGGTGTCAACAAAGAAGATGTGCATGGATTT
GAGAATATTAATATGGTGCCTACTGATTTTGATCCTATGGATGATACAGATATTTGGCTA
AATGGAAATTTCTCTAATGATTTTACTTCTCTTCAAGATTTTCCATGCATGTCGTCTTCA
TCATCAACTTCCAATTCCCTTCCTACTGAACAATCTGATCCATGTTCTAGTTGGGCTGTT
CAAAAATCTGATGGTGATGAACAAAATTTCGACACAATTAGTGATCAAGAATGTCTAAAT
GTGATGGATTTAATTGACGGGGATCATGAATTTCTTGACCCTGTGATCTCTTTTTTCCAT
AGTGGAGAAAATCAACAACAAAAAGAGCAAGCAAATGATGAGCAAGTGTCTATTTTTCAA
GGGGATAGTGAGCTTGCGCTTATGTTTTTGGAATGGTTAAAGCAAAACAAAGATAACATT
TCTGCTGAAGACATGAGGAGTATTAAGCTTAAACGTTCGACAATTGAAAGCGCGTCGAAG
CGATTGGGAAGTACTAAAGAAGGGAAAAAACAGTTGTTGAGGCTCATTCTTGATTGGGTT
GAACAACATAGATTGCAAAAGAAACAAATGAGAGTAGAACAGAGTATCCAAAACTCTGCC
CCTTTTAACTTTAATAATCCAAATGCTTGCTTATATAATGCCTCGTTCCCCGATTCGTCC
CCTGTAATGACAGGGCCAATACAGGGGTACATTGGTGATCTGTATTCTAATGGATCTTTA
TTCGCGCCTCCTTATAATCAAACAATGAGTGGAAGTGCAACTTCTCGGTCTTGGTCTCCA
TCGCAATTTACAATGGCGACCGCTTCTCAATACAATCCATTTCCTGATAATGATAGTACT
GATAATGTTGCTATACCTGATCAGCCTTTATTCAGTGCTCAATATGATCCGTACCAAGTT
TTCGATGGGAACAGTGAGAGATTGGCAAGGTTGGGCACTTGTGCTACTAAAGAAGCTAGG
AAGAACAGAATGGCTAGGCAGAGACGAGTACCGTTGCATCATTATCGCCATCAGACTCAG
AATCAAAGACAAATTAGTAATGAGAAAAGTGTAATGATGGGTGGAAAGATTAATAATTGT
GCAATGTCTCGAGCTAACAGTCTAGGAAATTGGGTATATTGGCCTTGTGCTGCTGCTGCT
CCGCCAATCGCCATGGTTCCATTGGCTGATACTCCGCAAGCACTTCCTATGGAGAGGCCA
GCGGTGCAATCACAAAAACATGGTTCGACAGACAAAAGACAGGCTTGCAAAACAGAGAAG
AATCTCAAATTTCTCCTGCAAAAAGTGCTGAAGCAAAGTGATGTTGGCAATCTAGGAAGA
ATTGTGTTACCAAAGAAAGAAGCAGAAAGTCATCTCCCCCAACTTGAAACAAGAGATGGA
ATCTCAATTGCCATGGAAGACATTGGAACTTCTCGTGTTTGGAACATGAAATATAGATTT
TGGCCAAATAACAAAAGCAGGATGTACCTTCTCGAGAACACAGGTGATTTTGTCCTAGCT
AATGGACTTCAAGAAGGTGATTTCATTGTAATATACGCCGACATAAAGTGTGGCAAATAT
TTGATACGAGGAGTAAAAGTGAGGCCGAATGGAGCAAAATCAGACAGCACGCAGCCAGCA
AAGAAAATCGTTCGTAAAATAGCTGCTGTTGATTCATCTCCATTTGCACAAGCTGTTCGA
TAG