Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051736
CDS Infomation

pacid=37450420 polypeptide=PGSC0003DMP400034832 locus=PGSC0003DMG401020085 ID=PGSC0003DMT400051736.v4.03 annot-version=v4.03
Sequence

ATGCATTGCAAGTTTACAGTTTCTTCTCTTGATGCAATTTGTGACTTGCTATGCATGCAC
AGTCCTCAAGCACTTGGGATGCAACATTTCTCAATCAAGACATCAAGCTTCCTAGAGAAC
AACTTTCAATCCTTGCCAGCTGGACTGATATCTTTGCTATCATCAGGGAGGTCCTTGTCT
TCACTATGCTTATCAGACAACCATCTTCCTCGCCATTTTGCGAGGAAAGTATTTGATACC
CTCGTTGATGCTTCATCTAGTATTACCGTTCTGGACCTTTCAGAAAACAATATCGCGGGA
TGGCTTTCTCATTTTAAATATAAGAACAGAAGTAGTACAGAGTCATCTGGGACATATAAT
TCATTGAAGTCATTAAAGGAGCTTAATTTAAGGAACTGCAATCTACAGATGGACGATGTG
GATTGTCTCAGATATGCTCTAGTCCACATACCTAATCTGGAGCAACTTGATCTCAGTGAT
AATCCTATCGAGACTTCTGGAATCAGGTGTCTAATCCCCTACTTCAAAGAGACGTCCCAT
AAATATTTCCCCCTTGTCGAATTGAAGTTGGAAAGTTGTGAGCTTACATGCTTTGGAGTT
TGTGAACTTCTAGAAGCTCTTTCATCTTTGAGAAAACCACTGAATTTTCTCTCGATCGGA
GGCAACTCTCTTGGCAGTGAGATAGGAACAGCACTAGGGAAGTTTCTATGCGGAGGTATT
CAAGCTCTTGATATTGAAGACATTGGACTAGGTTCTTCTGGCTTCATGAGAGCAGGCCAA
GAGATAGTAACGGAAACAAAGCTCCACTCAATCAACATAAGCAAGAATCGAGGTGGAATT
GAAACTGCAAGATTTCTGTCAAAGCTTTTCTCTTATGCACCAGATCTTTCAACAGTAAAC
GCAAAATACAACTTTATGCCCAAAGAATCTTTGTCAATCCTTTCCTCTGCTGTAAAAGCT
GCAAAAGGTAAACTGGAGCATTTGGATTTGAGGGGAAATATCATGTGTGGACAACAAGTT
CATTTATCTGAGTTGGCTGAGTTTCAAACCAATGGATTTTCTATTTTGGAACTCTCTTCT
TCACCAGCTTTAAATGAACCTTATGATGATGATCCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400034832
PEP Infomation

pacid=37450420 transcript=PGSC0003DMT400051736 locus=PGSC0003DMG401020085 ID=PGSC0003DMT400051736.v4.03 annot-version=v4.03
Sequence

MHCKFTVSSLDAICDLLCMHSPQALGMQHFSIKTSSFLENNFQSLPAGLISLLSSGRSLS
SLCLSDNHLPRHFARKVFDTLVDASSSITVLDLSENNIAGWLSHFKYKNRSSTESSGTYN
SLKSLKELNLRNCNLQMDDVDCLRYALVHIPNLEQLDLSDNPIETSGIRCLIPYFKETSH
KYFPLVELKLESCELTCFGVCELLEALSSLRKPLNFLSIGGNSLGSEIGTALGKFLCGGI
QALDIEDIGLGSSGFMRAGQEIVTETKLHSINISKNRGGIETARFLSKLFSYAPDLSTVN
AKYNFMPKESLSILSSAVKAAKGKLEHLDLRGNIMCGQQVHLSELAEFQTNGFSILELSS
SPALNEPYDDDP*

Transcript Sequence

Transcript ID

PGSC0003DMT400051736
Transcript Infomation

pacid=37450420 locus=PGSC0003DMG401020085 ID=PGSC0003DMT400051736.v4.03 annot-version=v4.03
Sequence

ATGCATTGCAAGTTTACAGTTTCTTCTCTTGATGCAATTTGTGACTTGCTATGCATGCAC
AGTCCTCAAGCACTTGGGATGCAACATTTCTCAATCAAGACATCAAGCTTCCTAGAGAAC
AACTTTCAATCCTTGCCAGCTGGACTGATATCTTTGCTATCATCAGGGAGGTCCTTGTCT
TCACTATGCTTATCAGACAACCATCTTCCTCGCCATTTTGCGAGGAAAGTATTTGATACC
CTCGTTGATGCTTCATCTAGTATTACCGTTCTGGACCTTTCAGAAAACAATATCGCGGGA
TGGCTTTCTCATTTTAAATATAAGAACAGAAGTAGTACAGAGTCATCTGGGACATATAAT
TCATTGAAGTCATTAAAGGAGCTTAATTTAAGGAACTGCAATCTACAGATGGACGATGTG
GATTGTCTCAGATATGCTCTAGTCCACATACCTAATCTGGAGCAACTTGATCTCAGTGAT
AATCCTATCGAGACTTCTGGAATCAGGTGTCTAATCCCCTACTTCAAAGAGACGTCCCAT
AAATATTTCCCCCTTGTCGAATTGAAGTTGGAAAGTTGTGAGCTTACATGCTTTGGAGTT
TGTGAACTTCTAGAAGCTCTTTCATCTTTGAGAAAACCACTGAATTTTCTCTCGATCGGA
GGCAACTCTCTTGGCAGTGAGATAGGAACAGCACTAGGGAAGTTTCTATGCGGAGGTATT
CAAGCTCTTGATATTGAAGACATTGGACTAGGTTCTTCTGGCTTCATGAGAGCAGGCCAA
GAGATAGTAACGGAAACAAAGCTCCACTCAATCAACATAAGCAAGAATCGAGGTGGAATT
GAAACTGCAAGATTTCTGTCAAAGCTTTTCTCTTATGCACCAGATCTTTCAACAGTAAAC
GCAAAATACAACTTTATGCCCAAAGAATCTTTGTCAATCCTTTCCTCTGCTGTAAAAGCT
GCAAAAGGTAAACTGGAGCATTTGGATTTGAGGGGAAATATCATGTGTGGACAACAAGTT
CATTTATCTGAGTTGGCTGAGTTTCAAACCAATGGATTTTCTATTTTGGAACTCTCTTCT
TCACCAGCTTTAAATGAACCTTATGATGATGATCCTTAG