Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051661
CDS Infomation

pacid=37454013 polypeptide=PGSC0003DMP400034779 locus=PGSC0003DMG400020061 ID=PGSC0003DMT400051661.v4.03 annot-version=v4.03
Sequence

ATGCCGAATCAAGTGGTGAAAGTGAAGAGGGAGAAAATTGCGGCATGCATTACATGCCCT
CTTTGTCATAAGCTATTCAGAGATGCTACTACTATTTCTGAATGTCTTCATACGTTTTGC
AGGAAATGCATCTATAAGAAACTCTCTGATGAAGAAACTGAATGCTGTCCAATATGCAAT
ATTGACTTGGGATGTGTCCCATTAGAGAAATTGAGGCCAGATCATAATCTGCAAGATATT
AGAGCAAAGATATTCCCTTACAAGAGGCAAAAGGTGCAGGCACCTGAAGTTGTGCCTTCA
GTTACCCCTCCAATCAGGAGAAAAGAGAGATCATTATCATCACTAGTGGTCAGTACTCCA
AGAGTATCAACACAGACTGGAACAACAGGAAGGAGATCGAAATCAGTGGCAAGAAAAGCA
TTACGAGGCTCCACATTTTCTGTTGAGAAACCTGTCAGAAAAGAGGGAAGTTCTGGAGAA
GATCAGCTGGATAGCGCTAGTTCACCTGAGACTTTGAACAAGTTCACTCAGAACATTAGG
CAGAACTCTTCCAGTGCTGAGCTATTTGGCCAACCCACACCTGATAACGAAACAGAGAAT
GGCATGGATCTGTGGGAAGGTCAAGTTGATTTGTGGAAACCTTTGAACTGTTTGGTGGAA
GCAGCAAACCGGAGCAAGTCTGCGAAGTTTACTTCCCCAGGTTCTACTGCCAAATCTGAA
TATCTGCATTCCCTTGACAATGAGGCTCATGTCCGTAAAAATAAAGTGAAAAAACATGGA
CTGGAAACCAAAGTCCAGGATAACAAGAATAACAGTGGACCTGCTCATTTGGGGTCAGAT
AAACCTAAAAAGATGCGGAGAAATAGCCAAAAGAAGGCATCAGAATCTGGTGGATTTAGT
ATTTCACCACAAACTGTGCTGGATGCAATCGCTACCAAATGTGAAAGGAGGAATAATCCA
ATTTGGTTCTCGTTAGTGGCCTCTGAAGATCGGGAGGGCGATGCACCATTGCCCCAGATT
TCTGCAGGTTACTTGAGAATAAAGAATGGCAATGTTCCTGTTTCTTACATCCAAAAGTAT
CTGATGAAGAAGTTAGATCTTATCAGTGAAGATGAGGTTGAAATTAGATGTATGGGCCAG
TTGATAGCCCCCACTTTGCAAGTGAATACTTTGGTAGATATGTGGCTTGAAACTACTACA
CCAGAAAGCGTGCCAGTTATTACTGGTTCATCAGCGAAGGATTTTGTGATGGTGCTGTCA
TATGCTCATAAGGTCCCGGTCCCTGTCCATCCAGCTTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400034779
PEP Infomation

pacid=37454013 transcript=PGSC0003DMT400051661 locus=PGSC0003DMG400020061 ID=PGSC0003DMT400051661.v4.03 annot-version=v4.03
Sequence

MPNQVVKVKREKIAACITCPLCHKLFRDATTISECLHTFCRKCIYKKLSDEETECCPICN
IDLGCVPLEKLRPDHNLQDIRAKIFPYKRQKVQAPEVVPSVTPPIRRKERSLSSLVVSTP
RVSTQTGTTGRRSKSVARKALRGSTFSVEKPVRKEGSSGEDQLDSASSPETLNKFTQNIR
QNSSSAELFGQPTPDNETENGMDLWEGQVDLWKPLNCLVEAANRSKSAKFTSPGSTAKSE
YLHSLDNEAHVRKNKVKKHGLETKVQDNKNNSGPAHLGSDKPKKMRRNSQKKASESGGFS
ISPQTVLDAIATKCERRNNPIWFSLVASEDREGDAPLPQISAGYLRIKNGNVPVSYIQKY
LMKKLDLISEDEVEIRCMGQLIAPTLQVNTLVDMWLETTTPESVPVITGSSAKDFVMVLS
YAHKVPVPVHPAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400051661
Transcript Infomation

pacid=37454013 locus=PGSC0003DMG400020061 ID=PGSC0003DMT400051661.v4.03 annot-version=v4.03
Sequence

ATGCCGAATCAAGTGGTGAAAGTGAAGAGGGAGAAAATTGCGGCATGCATTACATGCCCT
CTTTGTCATAAGCTATTCAGAGATGCTACTACTATTTCTGAATGTCTTCATACGTTTTGC
AGGAAATGCATCTATAAGAAACTCTCTGATGAAGAAACTGAATGCTGTCCAATATGCAAT
ATTGACTTGGGATGTGTCCCATTAGAGAAATTGAGGCCAGATCATAATCTGCAAGATATT
AGAGCAAAGATATTCCCTTACAAGAGGCAAAAGGTGCAGGCACCTGAAGTTGTGCCTTCA
GTTACCCCTCCAATCAGGAGAAAAGAGAGATCATTATCATCACTAGTGGTCAGTACTCCA
AGAGTATCAACACAGACTGGAACAACAGGAAGGAGATCGAAATCAGTGGCAAGAAAAGCA
TTACGAGGCTCCACATTTTCTGTTGAGAAACCTGTCAGAAAAGAGGGAAGTTCTGGAGAA
GATCAGCTGGATAGCGCTAGTTCACCTGAGACTTTGAACAAGTTCACTCAGAACATTAGG
CAGAACTCTTCCAGTGCTGAGCTATTTGGCCAACCCACACCTGATAACGAAACAGAGAAT
GGCATGGATCTGTGGGAAGGTCAAGTTGATTTGTGGAAACCTTTGAACTGTTTGGTGGAA
GCAGCAAACCGGAGCAAGTCTGCGAAGTTTACTTCCCCAGGTTCTACTGCCAAATCTGAA
TATCTGCATTCCCTTGACAATGAGGCTCATGTCCGTAAAAATAAAGTGAAAAAACATGGA
CTGGAAACCAAAGTCCAGGATAACAAGAATAACAGTGGACCTGCTCATTTGGGGTCAGAT
AAACCTAAAAAGATGCGGAGAAATAGCCAAAAGAAGGCATCAGAATCTGGTGGATTTAGT
ATTTCACCACAAACTGTGCTGGATGCAATCGCTACCAAATGTGAAAGGAGGAATAATCCA
ATTTGGTTCTCGTTAGTGGCCTCTGAAGATCGGGAGGGCGATGCACCATTGCCCCAGATT
TCTGCAGGTTACTTGAGAATAAAGAATGGCAATGTTCCTGTTTCTTACATCCAAAAGTAT
CTGATGAAGAAGTTAGATCTTATCAGTGAAGATGAGGTTGAAATTAGATGTATGGGCCAG
TTGATAGCCCCCACTTTGCAAGTGAATACTTTGGTAGATATGTGGCTTGAAACTACTACA
CCAGAAAGCGTGCCAGTTATTACTGGTTCATCAGCGAAGGATTTTGTGATGGTGCTGTCA
TATGCTCATAAGGTCCCGGTCCCTGTCCATCCAGCTTCTTGA