Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051425
CDS Infomation

pacid=37439789 polypeptide=PGSC0003DMP400034664 locus=PGSC0003DMG400019974 ID=PGSC0003DMT400051425.v4.03 annot-version=v4.03
Sequence

ATGTCGGAGTTTTCCGGCGAGTTATCGGAGTTCAGTTCCGGAGAAAACGGCGTCGGTGGC
GGTGGAGGAGGCAATGTGCGTGAGACGACGCCGTTGACAGTGTCGGCGTCGTTTAAGGAA
GGGAAGAGTTCACGGAGGAAGACGGCGGTGATGAGGCCAAGCCTTGATGCGGATGAGTTC
TTTAACCTTCTTCATGGTTCGGATCCGGTGAAATTGGAGCTCAATCGACTTGAGAATGAA
GTCAGAGATAAGGACCGGGAATTGACTGAAGCTCAAGCGGAGATCAAGGCACTGAAGTTA
TCCGAGAGATTACGAGAAAAGGCTGTTGAAGAGCTCACGGATGAGTTGTCAAGGGTCGAC
GAGAAGCTTAAGTTGACAGAATCTCTTTTAGAAAGCAAGAATCTTGAAATTAAGAAAATT
AATGATGAGAAGAAAGCATCCATGGCAGCTCAATTTGCAGCAGAAGCCACTCTTAGAAGG
GTCCATGCTGCCCAAAAAGATGATGATATGCCGCCTATTGAAGCCATCCTTGCACCTTTG
GAGGCTGAACTCAAGCTCGCACGTCAGGAGATTGCAAAGCTGCAAGATGATAATAAAGCA
CTGGATCGTCTTACAAAGTCGAAAGAGGCAGCTTTACTTGATGCTGAGAGAACTGTGCAG
TCAGCATTAGCAAAAGCTTCTATGGTGGATGACCTTCAGAACAAGAACCAAGAGCTGATG
AAACAGATAGAAATATGCCAGGAAGAAAATAAAATATTGGACAGAATGCATCGCCAAAAG
GTTGCAGAGGTTGAAAAGCTTACCCAAACAGTACGTGAGCTTGAGGAGGCTGTTCTTGCT
GGTGGTGCAGCTGCTAATGCTGTCCGGGATTATCAACGGAAAGTTCAAGAGATGAATGAA
GAAAGAAAAACTCTTGATCGAGAACTGGCACGTGCCAAGGTAACAGCTAATAGGGTAGCA
ACTGTGGTTGCTAATGAGTGGAAAGATGCCAATGATAAAGTAATGCCTGTGAAACAATGG
CTTGAAGAAAGGAGGTTTTTGCAGGGTGAGATGCAAACATTGCGTGACAAGCTCGCTGTC
ACTGAACGAGCTGCTAAATCAGAAGCCATGTTAAAAGAGAGATATCAACTGAGGCTTAAG
GTCCTTGAAGAGACATTAAGATCATCCAGCTCAGCTACTCGCAGTACACCAGATGGTAGA
AGTTCAAGCAATGGTCCTTCACGCCGGCAATCACTGGGAGGCGCTGAAAACATCTCCAAA
TTAACCTATAATGGCTTTTTACCAAAGAGATCACCATCATTTCAGCTTAGATCTTCTGGG
TCTAGCACAGTGCTGAAGAATGCTAAAGGGACATCAAAGTCGTTTGATGGTGGCTCAAGG
TCACTGGACAGGGGAAAAAACCTTCTGAATGGTACAGGTCCAAATTTCAACAGCAGCAAG
TCGTGTGATGGAACCAAAGACAATGAGACTGAGAATAGTTCCTGGAAAGCAAGTCAAGTT
GAAAAAAGCAACGACACACCAGTGACAGAAAGAGAAGATACCATACCTGGAATATTATAT
GATTTGCTGCAAAAGGAAGTAATTGCTTTGAGGAAAGCAGGCAATGAGAAGGATCAAAGT
CTTAAAGACAAGGATGATGCCATTGAGATGTTAGCTAAGAAAGTAGAGACCTTAACAAAA
GCCATGGAGGTTGAGGCTAAAAAAATGAGAAGGGAGGTTGCTGCCATGGAGAAGGAGGTG
TCTGCCATGCGTGTTGAGAAAGACCAAGAGAATAGAGCCAAAAGATTTGCAAATTCAAAG
GGTCCAGTGAGCAGTTCTCAGCTGCCTCCTGGAAGAAATGTAGCTCGAAGTGGGTTAACA
CGCAACATTCAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400034664
PEP Infomation

pacid=37439789 transcript=PGSC0003DMT400051425 locus=PGSC0003DMG400019974 ID=PGSC0003DMT400051425.v4.03 annot-version=v4.03
Sequence

MSEFSGELSEFSSGENGVGGGGGGNVRETTPLTVSASFKEGKSSRRKTAVMRPSLDADEF
FNLLHGSDPVKLELNRLENEVRDKDRELTEAQAEIKALKLSERLREKAVEELTDELSRVD
EKLKLTESLLESKNLEIKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPL
EAELKLARQEIAKLQDDNKALDRLTKSKEAALLDAERTVQSALAKASMVDDLQNKNQELM
KQIEICQEENKILDRMHRQKVAEVEKLTQTVRELEEAVLAGGAAANAVRDYQRKVQEMNE
ERKTLDRELARAKVTANRVATVVANEWKDANDKVMPVKQWLEERRFLQGEMQTLRDKLAV
TERAAKSEAMLKERYQLRLKVLEETLRSSSSATRSTPDGRSSSNGPSRRQSLGGAENISK
LTYNGFLPKRSPSFQLRSSGSSTVLKNAKGTSKSFDGGSRSLDRGKNLLNGTGPNFNSSK
SCDGTKDNETENSSWKASQVEKSNDTPVTEREDTIPGILYDLLQKEVIALRKAGNEKDQS
LKDKDDAIEMLAKKVETLTKAMEVEAKKMRREVAAMEKEVSAMRVEKDQENRAKRFANSK
GPVSSSQLPPGRNVARSGLTRNIQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400051425
Transcript Infomation

pacid=37439789 locus=PGSC0003DMG400019974 ID=PGSC0003DMT400051425.v4.03 annot-version=v4.03
Sequence

ATGTCGGAGTTTTCCGGCGAGTTATCGGAGTTCAGTTCCGGAGAAAACGGCGTCGGTGGC
GGTGGAGGAGGCAATGTGCGTGAGACGACGCCGTTGACAGTGTCGGCGTCGTTTAAGGAA
GGGAAGAGTTCACGGAGGAAGACGGCGGTGATGAGGCCAAGCCTTGATGCGGATGAGTTC
TTTAACCTTCTTCATGGTTCGGATCCGGTGAAATTGGAGCTCAATCGACTTGAGAATGAA
GTCAGAGATAAGGACCGGGAATTGACTGAAGCTCAAGCGGAGATCAAGGCACTGAAGTTA
TCCGAGAGATTACGAGAAAAGGCTGTTGAAGAGCTCACGGATGAGTTGTCAAGGGTCGAC
GAGAAGCTTAAGTTGACAGAATCTCTTTTAGAAAGCAAGAATCTTGAAATTAAGAAAATT
AATGATGAGAAGAAAGCATCCATGGCAGCTCAATTTGCAGCAGAAGCCACTCTTAGAAGG
GTCCATGCTGCCCAAAAAGATGATGATATGCCGCCTATTGAAGCCATCCTTGCACCTTTG
GAGGCTGAACTCAAGCTCGCACGTCAGGAGATTGCAAAGCTGCAAGATGATAATAAAGCA
CTGGATCGTCTTACAAAGTCGAAAGAGGCAGCTTTACTTGATGCTGAGAGAACTGTGCAG
TCAGCATTAGCAAAAGCTTCTATGGTGGATGACCTTCAGAACAAGAACCAAGAGCTGATG
AAACAGATAGAAATATGCCAGGAAGAAAATAAAATATTGGACAGAATGCATCGCCAAAAG
GTTGCAGAGGTTGAAAAGCTTACCCAAACAGTACGTGAGCTTGAGGAGGCTGTTCTTGCT
GGTGGTGCAGCTGCTAATGCTGTCCGGGATTATCAACGGAAAGTTCAAGAGATGAATGAA
GAAAGAAAAACTCTTGATCGAGAACTGGCACGTGCCAAGGTAACAGCTAATAGGGTAGCA
ACTGTGGTTGCTAATGAGTGGAAAGATGCCAATGATAAAGTAATGCCTGTGAAACAATGG
CTTGAAGAAAGGAGGTTTTTGCAGGGTGAGATGCAAACATTGCGTGACAAGCTCGCTGTC
ACTGAACGAGCTGCTAAATCAGAAGCCATGTTAAAAGAGAGATATCAACTGAGGCTTAAG
GTCCTTGAAGAGACATTAAGATCATCCAGCTCAGCTACTCGCAGTACACCAGATGGTAGA
AGTTCAAGCAATGGTCCTTCACGCCGGCAATCACTGGGAGGCGCTGAAAACATCTCCAAA
TTAACCTATAATGGCTTTTTACCAAAGAGATCACCATCATTTCAGCTTAGATCTTCTGGG
TCTAGCACAGTGCTGAAGAATGCTAAAGGGACATCAAAGTCGTTTGATGGTGGCTCAAGG
TCACTGGACAGGGGAAAAAACCTTCTGAATGGTACAGGTCCAAATTTCAACAGCAGCAAG
TCGTGTGATGGAACCAAAGACAATGAGACTGAGAATAGTTCCTGGAAAGCAAGTCAAGTT
GAAAAAAGCAACGACACACCAGTGACAGAAAGAGAAGATACCATACCTGGAATATTATAT
GATTTGCTGCAAAAGGAAGTAATTGCTTTGAGGAAAGCAGGCAATGAGAAGGATCAAAGT
CTTAAAGACAAGGATGATGCCATTGAGATGTTAGCTAAGAAAGTAGAGACCTTAACAAAA
GCCATGGAGGTTGAGGCTAAAAAAATGAGAAGGGAGGTTGCTGCCATGGAGAAGGAGGTG
TCTGCCATGCGTGTTGAGAAAGACCAAGAGAATAGAGCCAAAAGATTTGCAAATTCAAAG
GGTCCAGTGAGCAGTTCTCAGCTGCCTCCTGGAAGAAATGTAGCTCGAAGTGGGTTAACA
CGCAACATTCAATAA