Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051417
CDS Infomation

pacid=37439109 polypeptide=PGSC0003DMP400034659 locus=PGSC0003DMG400019972 ID=PGSC0003DMT400051417.v4.03 annot-version=v4.03
Sequence

ATGGCGACCCTCGAAAGCTTAATCGGATTGGTGAATAGAATTCAACGTGCTTGTACTATT
TTAGGAGATCATGGAGGTGAAGGAATGTCCCTTTGGGAAGCTCTTCCTACCGTCGCCGTC
GTTGGTGGCCAGGCTAGTATTCATTTTTATGTGTTTTTTCATTCATATCTTGTAACTAAA
TTTGGATTCGTGCCGGGAAGTCCGAAATATCTGAGCTCTGGAAAATCATCGGTGTTGGAA
AGCGTTGTAGGTAGAGATTTCCTGCCTCGTGGATCAGCTGCGGTACGTCAAGAGATTGCG
GATGAGACGGACCGCATAACAGGGAAGAGCAAGCAAATCTCAAATGTTCCAATTCACCTG
AGCATTTTTTCTCCTAATGTGGTAGATTTAACACTCATCGATCTTCCTGGATTGACAAAG
GTTGCTGTAGAGGGACAACCAGATAGCATTGTTGAAGATATTGAAATGATGGTCCGCTCA
TACGTGGAAAAACCCAATTGCATTATATTGGCAATTTCTCCTGCCAATCAAGATATTGCA
ACTTCTGATGCAATAAAGCTTGCAAGAGAAGTTGATCCTTCAGGTGAAAGAACGTTTGGA
GTTATAACGAAACTTGATCTGATGGATCAGGGAACCAATGCCTTGGATGTACTCGAAGGT
CGATCATATAAGCTCCAACATCCATGGGTTGGAGTCGTCAACCGTTCACAGGCTGATATC
AACAAGAGTGTCGATATGATGGCTGCTCGTCGAAAGGAGCTGGAATACTTTGAGTCAAGT
CCTGAATATGGACATCTTGCTCATAAAATGGGAGCTGAATATCTTGCAAAACTTTTATCG
AAGCACTTGGAGACTGTGATCAGACAGAGAATACCAAGCATTATTGCTCTAATAAACAAG
ACAATTGATGAGCTTAATGCTGAGTTAGACCGAATTGGCCGCCCTGTTGGTGTAGATGGA
GGGGCACAACTATACACAATCTTGGAAATGTGTCGTGCATTCGATAGAATATTTAGGGAA
CATCTGGAAGGAGGGAGGCCCGGTGGTGATAGAATATATGGTGTCTTTGATCATCAGCTA
CCAGCTGCTCTTAAGAAGCTTCCGTTTGATCGTCATCTTTCAACGAGTAATGTCAAAAAG
GTTATTTCCGAGGCAGATGGATACCAGCCTCACTTGATCGCTCCTGAACAAGGTTACAGA
AGGCTAATCGATGGATCTCTTGGCTTCTTCAAAGGCCCTGCTGAAGCCTCAGTTGATGCA
GTGCATGTCATTCTGAAAGAACTTGTGAGGAAGTCACTTGCAGAAACACAGGAACTGAAG
CGTTTTCCGTCACTTCAATCTGATATTGCAGCAGCAGCAAATGATGCTCTTGACAGATTT
CGTGATGAAAGTCGAAAGACAGTTTCACGGCTAGTAGAGATGGAGTCTTCTTACCTGACA
GTTGAATTCTTTAGGAAGCTTCAGACTGAACCAGAAAAACTACCTGCAAACCAAACACAG
GCACAGGAGAAGGCGCAGGCGCAAGCAGCTTCAAACAAGGAGGAGCTGGGGAAAATGCTC
GATGAGGATCCCGCTCTCATGGGAAAGAGAGAGACCATAGCCAAAAGGCTTGAGCTATAT
AAGTCAGCCAGAGATGAGATTGATGCAGTTGCATGGAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400034659
PEP Infomation

pacid=37439109 transcript=PGSC0003DMT400051417 locus=PGSC0003DMG400019972 ID=PGSC0003DMT400051417.v4.03 annot-version=v4.03
Sequence

MATLESLIGLVNRIQRACTILGDHGGEGMSLWEALPTVAVVGGQASIHFYVFFHSYLVTK
FGFVPGSPKYLSSGKSSVLESVVGRDFLPRGSAAVRQEIADETDRITGKSKQISNVPIHL
SIFSPNVVDLTLIDLPGLTKVAVEGQPDSIVEDIEMMVRSYVEKPNCIILAISPANQDIA
TSDAIKLAREVDPSGERTFGVITKLDLMDQGTNALDVLEGRSYKLQHPWVGVVNRSQADI
NKSVDMMAARRKELEYFESSPEYGHLAHKMGAEYLAKLLSKHLETVIRQRIPSIIALINK
TIDELNAELDRIGRPVGVDGGAQLYTILEMCRAFDRIFREHLEGGRPGGDRIYGVFDHQL
PAALKKLPFDRHLSTSNVKKVISEADGYQPHLIAPEQGYRRLIDGSLGFFKGPAEASVDA
VHVILKELVRKSLAETQELKRFPSLQSDIAAAANDALDRFRDESRKTVSRLVEMESSYLT
VEFFRKLQTEPEKLPANQTQAQEKAQAQAASNKEELGKMLDEDPALMGKRETIAKRLELY
KSARDEIDAVAWK*

Transcript Sequence

Transcript ID

PGSC0003DMT400051417
Transcript Infomation

pacid=37439109 locus=PGSC0003DMG400019972 ID=PGSC0003DMT400051417.v4.03 annot-version=v4.03
Sequence

ATGGCGACCCTCGAAAGCTTAATCGGATTGGTGAATAGAATTCAACGTGCTTGTACTATT
TTAGGAGATCATGGAGGTGAAGGAATGTCCCTTTGGGAAGCTCTTCCTACCGTCGCCGTC
GTTGGTGGCCAGGCTAGTATTCATTTTTATGTGTTTTTTCATTCATATCTTGTAACTAAA
TTTGGATTCGTGCCGGGAAGTCCGAAATATCTGAGCTCTGGAAAATCATCGGTGTTGGAA
AGCGTTGTAGGTAGAGATTTCCTGCCTCGTGGATCAGCTGCGGTACGTCAAGAGATTGCG
GATGAGACGGACCGCATAACAGGGAAGAGCAAGCAAATCTCAAATGTTCCAATTCACCTG
AGCATTTTTTCTCCTAATGTGGTAGATTTAACACTCATCGATCTTCCTGGATTGACAAAG
GTTGCTGTAGAGGGACAACCAGATAGCATTGTTGAAGATATTGAAATGATGGTCCGCTCA
TACGTGGAAAAACCCAATTGCATTATATTGGCAATTTCTCCTGCCAATCAAGATATTGCA
ACTTCTGATGCAATAAAGCTTGCAAGAGAAGTTGATCCTTCAGGTGAAAGAACGTTTGGA
GTTATAACGAAACTTGATCTGATGGATCAGGGAACCAATGCCTTGGATGTACTCGAAGGT
CGATCATATAAGCTCCAACATCCATGGGTTGGAGTCGTCAACCGTTCACAGGCTGATATC
AACAAGAGTGTCGATATGATGGCTGCTCGTCGAAAGGAGCTGGAATACTTTGAGTCAAGT
CCTGAATATGGACATCTTGCTCATAAAATGGGAGCTGAATATCTTGCAAAACTTTTATCG
AAGCACTTGGAGACTGTGATCAGACAGAGAATACCAAGCATTATTGCTCTAATAAACAAG
ACAATTGATGAGCTTAATGCTGAGTTAGACCGAATTGGCCGCCCTGTTGGTGTAGATGGA
GGGGCACAACTATACACAATCTTGGAAATGTGTCGTGCATTCGATAGAATATTTAGGGAA
CATCTGGAAGGAGGGAGGCCCGGTGGTGATAGAATATATGGTGTCTTTGATCATCAGCTA
CCAGCTGCTCTTAAGAAGCTTCCGTTTGATCGTCATCTTTCAACGAGTAATGTCAAAAAG
GTTATTTCCGAGGCAGATGGATACCAGCCTCACTTGATCGCTCCTGAACAAGGTTACAGA
AGGCTAATCGATGGATCTCTTGGCTTCTTCAAAGGCCCTGCTGAAGCCTCAGTTGATGCA
GTGCATGTCATTCTGAAAGAACTTGTGAGGAAGTCACTTGCAGAAACACAGGAACTGAAG
CGTTTTCCGTCACTTCAATCTGATATTGCAGCAGCAGCAAATGATGCTCTTGACAGATTT
CGTGATGAAAGTCGAAAGACAGTTTCACGGCTAGTAGAGATGGAGTCTTCTTACCTGACA
GTTGAATTCTTTAGGAAGCTTCAGACTGAACCAGAAAAACTACCTGCAAACCAAACACAG
GCACAGGAGAAGGCGCAGGCGCAAGCAGCTTCAAACAAGGAGGAGCTGGGGAAAATGCTC
GATGAGGATCCCGCTCTCATGGGAAAGAGAGAGACCATAGCCAAAAGGCTTGAGCTATAT
AAGTCAGCCAGAGATGAGATTGATGCAGTTGCATGGAAGTGA