Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051367
CDS Infomation

pacid=37454531 polypeptide=PGSC0003DMP400034626 locus=PGSC0003DMG400019952 ID=PGSC0003DMT400051367.v4.03 annot-version=v4.03
Sequence

ATGGATGAGGAAAGGTTCATTGAAGTTTCTAAAAGTGGAAACTTGATTCCTCTGCACAAA
ACCATTTTTTCTGATCATCTGACTCCGGTGTTGGCATACCGATGTTTGGTGAAAGAAGAG
GATCGTCAAGCTCCAAGTTTTCTATATGAGTCAGTTGAAGGTTCTAGTGTTGGTCGATAC
AGCGTGGTGGGAGCTCAACCATCCATGGAAATTGTAGTTAAGGAACACAACGTGACTATA
TTGGACCACCATGCTGGAAAATTGACTCAGAAGATGGTCGAAGATCCGATGACAATTCCA
GCAAGTATTTCCAACGGATGGAAGCCCGGACTTATTGATGAACTACCTGATACCTTTAGT
GGTGGATGGTTTGGTTACTTCTCATATGACACAGTTCGGTATGTAGAGAATAACAAGTTA
CCATTCCTAAGAGCTCCAGAGGATGACCGGAACCTTGCAGATATTCAGTTAGGACTTTAT
GAGGATGTCATTGTATTTGATCATGTAGAGAAGAAAGCGCATGTGATTCACTGGGTGCGG
TTGGATCAATATTCCTCTCTTCCTGAGGCTTATCTTGATGGGAAGAAACACTTGGAAATG
TTAATGTCTAGAGTACAAGGAATCGAGTCTCCAAGGTTATCTCCCGGTTCTGTGGATTTC
TGTATTGATGAATTTGGAACTTCGTTAACCACGGAAAACATGACACGTGAGGAGTACAAG
AATGCCATCTTACAGGCAAAGGAACACATTGCTTCTGGAGACATACATCAAATTGTTTTA
AGTCAACGTTTTGAGAGAAGAACATTTGCTGATCCATTTGAAGTCTATAGAGCATTAAGA
ATTGTGAATCCAAGCACATACATGACTTACTTACAAGCCAGAGGCTGTACTCTAGTTGCA
TCGAGTCCAGAAACTTTGACGCGTGAGAAGAAAAGAAGAATTGTTAATAGACCATTAGCT
GGGACAAGCAGAAGAGGGAGGACACCTGATGAGGATCTGATGTTGGAAATGCAGATGTTA
AAAGATGTTAAACCTGGTTTTGTGAATGTTGAAAATCTCATGAGTGTCGAGAGGTATTCC
GATGTGATGCACATGAGCTCCACGGTGTCGGGAGAGTTGCTTGATCATTTAACCTGTTGG
GATGCACTTCGGGCTGCATTGCCTGTTGGGACCATCTGTGGAGTACCAAAGGTTAAGGCG
ATGGAGTTGATCGATCAACTAGAAGTGGGTCGGAGAGGGCCTTACAGTGGTGGATTTGGA
GGCATTTCATTTTCAGGTGACATGGACATAGGATTAGCTCTAAGGACGATGGTATTCATG
AACGGACCTCGTTATGACACAATGTATTCATACACGGATGCCAGCAAACGTCAGGAATGG
GTTGCACATCTCCAATCTGAGGCTCGAATCGTCGCTGATAGTGATCCTGCTGAGAAACAT
AAAGAATGTGAAAATAAAGTAGCTTGTCTATGCAGGGCAATTGACTTGGCTGAATCAACT
TTTGTTAAGGGAAGATCATCCGTACTTAAGATAAATGGTTCTGTGCCAAATGTATTTTCA
AGGGCAAGAGTACATGAAAAAAAGATACTAACTAGCCAAATGAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400034626
PEP Infomation

pacid=37454531 transcript=PGSC0003DMT400051367 locus=PGSC0003DMG400019952 ID=PGSC0003DMT400051367.v4.03 annot-version=v4.03
Sequence

MDEERFIEVSKSGNLIPLHKTIFSDHLTPVLAYRCLVKEEDRQAPSFLYESVEGSSVGRY
SVVGAQPSMEIVVKEHNVTILDHHAGKLTQKMVEDPMTIPASISNGWKPGLIDELPDTFS
GGWFGYFSYDTVRYVENNKLPFLRAPEDDRNLADIQLGLYEDVIVFDHVEKKAHVIHWVR
LDQYSSLPEAYLDGKKHLEMLMSRVQGIESPRLSPGSVDFCIDEFGTSLTTENMTREEYK
NAILQAKEHIASGDIHQIVLSQRFERRTFADPFEVYRALRIVNPSTYMTYLQARGCTLVA
SSPETLTREKKRRIVNRPLAGTSRRGRTPDEDLMLEMQMLKDVKPGFVNVENLMSVERYS
DVMHMSSTVSGELLDHLTCWDALRAALPVGTICGVPKVKAMELIDQLEVGRRGPYSGGFG
GISFSGDMDIGLALRTMVFMNGPRYDTMYSYTDASKRQEWVAHLQSEARIVADSDPAEKH
KECENKVACLCRAIDLAESTFVKGRSSVLKINGSVPNVFSRARVHEKKILTSQMK*

Transcript Sequence

Transcript ID

PGSC0003DMT400051367
Transcript Infomation

pacid=37454531 locus=PGSC0003DMG400019952 ID=PGSC0003DMT400051367.v4.03 annot-version=v4.03
Sequence

ATGGATGAGGAAAGGTTCATTGAAGTTTCTAAAAGTGGAAACTTGATTCCTCTGCACAAA
ACCATTTTTTCTGATCATCTGACTCCGGTGTTGGCATACCGATGTTTGGTGAAAGAAGAG
GATCGTCAAGCTCCAAGTTTTCTATATGAGTCAGTTGAAGGTTCTAGTGTTGGTCGATAC
AGCGTGGTGGGAGCTCAACCATCCATGGAAATTGTAGTTAAGGAACACAACGTGACTATA
TTGGACCACCATGCTGGAAAATTGACTCAGAAGATGGTCGAAGATCCGATGACAATTCCA
GCAAGTATTTCCAACGGATGGAAGCCCGGACTTATTGATGAACTACCTGATACCTTTAGT
GGTGGATGGTTTGGTTACTTCTCATATGACACAGTTCGGTATGTAGAGAATAACAAGTTA
CCATTCCTAAGAGCTCCAGAGGATGACCGGAACCTTGCAGATATTCAGTTAGGACTTTAT
GAGGATGTCATTGTATTTGATCATGTAGAGAAGAAAGCGCATGTGATTCACTGGGTGCGG
TTGGATCAATATTCCTCTCTTCCTGAGGCTTATCTTGATGGGAAGAAACACTTGGAAATG
TTAATGTCTAGAGTACAAGGAATCGAGTCTCCAAGGTTATCTCCCGGTTCTGTGGATTTC
TGTATTGATGAATTTGGAACTTCGTTAACCACGGAAAACATGACACGTGAGGAGTACAAG
AATGCCATCTTACAGGCAAAGGAACACATTGCTTCTGGAGACATACATCAAATTGTTTTA
AGTCAACGTTTTGAGAGAAGAACATTTGCTGATCCATTTGAAGTCTATAGAGCATTAAGA
ATTGTGAATCCAAGCACATACATGACTTACTTACAAGCCAGAGGCTGTACTCTAGTTGCA
TCGAGTCCAGAAACTTTGACGCGTGAGAAGAAAAGAAGAATTGTTAATAGACCATTAGCT
GGGACAAGCAGAAGAGGGAGGACACCTGATGAGGATCTGATGTTGGAAATGCAGATGTTA
AAAGATGTTAAACCTGGTTTTGTGAATGTTGAAAATCTCATGAGTGTCGAGAGGTATTCC
GATGTGATGCACATGAGCTCCACGGTGTCGGGAGAGTTGCTTGATCATTTAACCTGTTGG
GATGCACTTCGGGCTGCATTGCCTGTTGGGACCATCTGTGGAGTACCAAAGGTTAAGGCG
ATGGAGTTGATCGATCAACTAGAAGTGGGTCGGAGAGGGCCTTACAGTGGTGGATTTGGA
GGCATTTCATTTTCAGGTGACATGGACATAGGATTAGCTCTAAGGACGATGGTATTCATG
AACGGACCTCGTTATGACACAATGTATTCATACACGGATGCCAGCAAACGTCAGGAATGG
GTTGCACATCTCCAATCTGAGGCTCGAATCGTCGCTGATAGTGATCCTGCTGAGAAACAT
AAAGAATGTGAAAATAAAGTAGCTTGTCTATGCAGGGCAATTGACTTGGCTGAATCAACT
TTTGTTAAGGGAAGATCATCCGTACTTAAGATAAATGGTTCTGTGCCAAATGTATTTTCA
AGGGCAAGAGTACATGAAAAAAAGATACTAACTAGCCAAATGAAATAA