Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051349
CDS Infomation

pacid=37478036 polypeptide=PGSC0003DMP400034613 locus=PGSC0003DMG400019944 ID=PGSC0003DMT400051349.v4.03 annot-version=v4.03
Sequence

ATGGCTTATTATTATACTTGCAATTTTCCTGATATTTACTCTTGGATTCACAACTTACCA
CCAATTTCTAAATGGAAAACAGACTCTATTTCAATTTGCATTTCTCCTTCATGTTCATCT
CAACCTTCCCTCAAACTCTCCATAGCTAAAAATTACCATTTTTCCATCGTCGCAGATTAT
AATCTTCCTATTTCCCTATGGACCTCAAAACCGTTAAGAATCAAACACAATACAACAAAA
TTATTAGACGACGAATCAGTATTCAATCTCTTGATCAATATCGTCCACGATGTCCTGAAC
TATGGTCCGAATAAAAATTATAACTCGTTGTTCCTCAAGATCCCACGAATGGATTTTAAC
AACTCAGATTTTAAGGAAATTTTCAATTTCTCATTTCTTACTTTGGCTTTCATAATTTGT
ATCTATGAAGCCCCTGCTGATCTTAGGTCAACATGTATTATTGCCCTGAAGAATCAATTT
TCATGTTCGCAATCTAGAGAAGCATCAAAATTGCTCGTGAGGTTTTTGGGATCGAATATT
GAAGAGCAGTGGATGCGTTCAGTAAATCTAGCGATAACTAATTGGATCCTGGAAATACAT
TCTTCTTCTAATCATCATGATCATGCGATGAAAACGCCATGTCCATTGTTTTCATACTCA
TTTTCGACACAGGGGCTATGGAAAGTTCAGCTGTATTGCCCTGTTATTGCAATGGATGCC
GAAACATCTACTTGTAGTAGTTTATCTGATGAAAGTTTGAGGTTTTCTCTCAACTTTCAT
CAGCTTGAAGGAGTGATCCAATTAAATCATAGAGTTATTGTTCGAGAAAAGTGGATTGAA
GTAATGGTGAACACCGATAACATTAGGTGTGATGTTGTTAGGCTAGTGAATGAATCACTA
ATGGCAGAGAGAGGAGCAGGGGTATCAGAGAAGCATTTCCCTTCAAGAATCTCATTGCAA
CTAACTCCAACACTTCAATCCAATGTGTTGAGCATATCAGTAAACAAGTCCTCTGACAAT
CCCTTAAGAGAAATTGGAACCGAAAAGACCATTGAAGCAGGATTCGATCCACCAAACACT
TACATAGGCTTAAAAGTCTCCGCAGGAGAGACAGTTGTTACGACCATGAAGCCGTGGAAA
TTTGAGCAATCTGTTAATGGAGATGGTGTAAATTTGAATTGGTTTCTTCATGATAGTGGA
AATGGAAGAGAGGTATTTTCGTCGAAGCCTTCTGTTTTTTCATTAATTCAGCCAAAGGCT
TGGTTCAAGAACAGATATTCAAGTGTTAATAGGCCTTTTACTAAGCAAGGAGGGGTAATT
TTTGCTGGAGATGAATATGGGGAAAGTGTGTGTTGGAAAGTGGACAAAAGGGCTATAGGG
AAAACAATGGAATGGGAATTGAAAGGGAGACTTTGGTTAACATATTGGCCAAATAAACAT
ATAACTCCTTATGCTGAGACTAGAAGATTGGAATTTAGAGAAGTTCTTCATCTCAACCTT
GCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400034613
PEP Infomation

pacid=37478036 transcript=PGSC0003DMT400051349 locus=PGSC0003DMG400019944 ID=PGSC0003DMT400051349.v4.03 annot-version=v4.03
Sequence

MAYYYTCNFPDIYSWIHNLPPISKWKTDSISICISPSCSSQPSLKLSIAKNYHFSIVADY
NLPISLWTSKPLRIKHNTTKLLDDESVFNLLINIVHDVLNYGPNKNYNSLFLKIPRMDFN
NSDFKEIFNFSFLTLAFIICIYEAPADLRSTCIIALKNQFSCSQSREASKLLVRFLGSNI
EEQWMRSVNLAITNWILEIHSSSNHHDHAMKTPCPLFSYSFSTQGLWKVQLYCPVIAMDA
ETSTCSSLSDESLRFSLNFHQLEGVIQLNHRVIVREKWIEVMVNTDNIRCDVVRLVNESL
MAERGAGVSEKHFPSRISLQLTPTLQSNVLSISVNKSSDNPLREIGTEKTIEAGFDPPNT
YIGLKVSAGETVVTTMKPWKFEQSVNGDGVNLNWFLHDSGNGREVFSSKPSVFSLIQPKA
WFKNRYSSVNRPFTKQGGVIFAGDEYGESVCWKVDKRAIGKTMEWELKGRLWLTYWPNKH
ITPYAETRRLEFREVLHLNLA*

Transcript Sequence

Transcript ID

PGSC0003DMT400051349
Transcript Infomation

pacid=37478036 locus=PGSC0003DMG400019944 ID=PGSC0003DMT400051349.v4.03 annot-version=v4.03
Sequence

ATGGCTTATTATTATACTTGCAATTTTCCTGATATTTACTCTTGGATTCACAACTTACCA
CCAATTTCTAAATGGAAAACAGACTCTATTTCAATTTGCATTTCTCCTTCATGTTCATCT
CAACCTTCCCTCAAACTCTCCATAGCTAAAAATTACCATTTTTCCATCGTCGCAGATTAT
AATCTTCCTATTTCCCTATGGACCTCAAAACCGTTAAGAATCAAACACAATACAACAAAA
TTATTAGACGACGAATCAGTATTCAATCTCTTGATCAATATCGTCCACGATGTCCTGAAC
TATGGTCCGAATAAAAATTATAACTCGTTGTTCCTCAAGATCCCACGAATGGATTTTAAC
AACTCAGATTTTAAGGAAATTTTCAATTTCTCATTTCTTACTTTGGCTTTCATAATTTGT
ATCTATGAAGCCCCTGCTGATCTTAGGTCAACATGTATTATTGCCCTGAAGAATCAATTT
TCATGTTCGCAATCTAGAGAAGCATCAAAATTGCTCGTGAGGTTTTTGGGATCGAATATT
GAAGAGCAGTGGATGCGTTCAGTAAATCTAGCGATAACTAATTGGATCCTGGAAATACAT
TCTTCTTCTAATCATCATGATCATGCGATGAAAACGCCATGTCCATTGTTTTCATACTCA
TTTTCGACACAGGGGCTATGGAAAGTTCAGCTGTATTGCCCTGTTATTGCAATGGATGCC
GAAACATCTACTTGTAGTAGTTTATCTGATGAAAGTTTGAGGTTTTCTCTCAACTTTCAT
CAGCTTGAAGGAGTGATCCAATTAAATCATAGAGTTATTGTTCGAGAAAAGTGGATTGAA
GTAATGGTGAACACCGATAACATTAGGTGTGATGTTGTTAGGCTAGTGAATGAATCACTA
ATGGCAGAGAGAGGAGCAGGGGTATCAGAGAAGCATTTCCCTTCAAGAATCTCATTGCAA
CTAACTCCAACACTTCAATCCAATGTGTTGAGCATATCAGTAAACAAGTCCTCTGACAAT
CCCTTAAGAGAAATTGGAACCGAAAAGACCATTGAAGCAGGATTCGATCCACCAAACACT
TACATAGGCTTAAAAGTCTCCGCAGGAGAGACAGTTGTTACGACCATGAAGCCGTGGAAA
TTTGAGCAATCTGTTAATGGAGATGGTGTAAATTTGAATTGGTTTCTTCATGATAGTGGA
AATGGAAGAGAGGTATTTTCGTCGAAGCCTTCTGTTTTTTCATTAATTCAGCCAAAGGCT
TGGTTCAAGAACAGATATTCAAGTGTTAATAGGCCTTTTACTAAGCAAGGAGGGGTAATT
TTTGCTGGAGATGAATATGGGGAAAGTGTGTGTTGGAAAGTGGACAAAAGGGCTATAGGG
AAAACAATGGAATGGGAATTGAAAGGGAGACTTTGGTTAACATATTGGCCAAATAAACAT
ATAACTCCTTATGCTGAGACTAGAAGATTGGAATTTAGAGAAGTTCTTCATCTCAACCTT
GCATAG