Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051270
CDS Infomation

pacid=37456803 polypeptide=PGSC0003DMP400034572 locus=PGSC0003DMG400019913 ID=PGSC0003DMT400051270.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAATTCTTCTTACATCAGTAATCAATAAATCTATAGAAATAGCTGGAAATCTA
CTGATTCAAGAAGGAAAACATTTATATTGGTTGAAAGAGGACATCGATTGGATCCAGAGA
GAAATGAGACACATTCGATCATATGTAGACAACGCAAAGGCCAAGGAAGTTGGAGGAGAT
TCAACGGTGAAAAACTTATTAAAAGATATTCAAGAATTGGCAGGTAATGTGGAGGATCTC
TTAGATGAGTTCCTTCCAAAAATTCAACAATCCAATAAGTTCAAAGACGCAATTTGTTGC
CTTAAGACGGTTTCTTTTGCAGATGAGTTTGCTATGGAGATTGAGAAGATAAAAAGAAGG
GTTATTGACATTGACCGTATAAGGACAACTTACAACATCATAGATACAGATAACAATAAT
GATGATTGTGTTCTATCGGACCGGAGAAGATTATTCCTTCATGCTGATGAAACAGAGGTC
ATCGGTTTGGATGATGACTTCAATATGCTACAAGCCAAATTACTTGATCAAGATTTGCAT
TATGGAGTTGTTTCCATAGTTGGCATGCCCGGTCTGGGGAAAACAACTCTTGCCAAGAAA
CTTTATAGGCTCGTTCGTGATCAATTTGAGTGTTCTGGACTGGTCTACGTTTCACAACAG
CCAAGAGCGGGAGAAATCTTACTCGGCATAGCCAAGGAAGTTGGACTGACGGAAAAGAAA
AGGAAGGAACATTTGGAGGACAACCTGCGATCACTCTTGAAAATAAAAAGGTATGTTATC
GTCCTAGATGACATTTGGGATGTTGAAATTTGGGATGATCTGAAACTTGTCCTTCCCGAA
TGTGATTCAAAAGTTGGCAGTAGAATAATTATCACGTCTCGAAATAGTAATGTAGGCAGA
TACATAGGAGGGGAATTCTCCCTCCATGCATTGCAACCCCTAGAATCGGAAAAAAGCTTT
GAGCTCTTTACCAAGAAAATCTTTAATTTTGATGAAAATATTAATTGGGCCAATGCTTCA
CCTGAGTTGGTAAATATTGGTAGAAGTATAGTTGAGAGATGTGGAGGTATACCGCTAGCC
ATAGTGGTGATTGCAGGCATGTTAAGAGCAAGAGAAAGAACAGAACATGCGTGGAACAGA
GTACTTGAGAGTATGGGCCATAAAGTTCAAGATGGATGTGCTAAGGCATTGGCTCCGAGT
TACAATGACTTGCCTATTGCATCAAGGCCATGTTTCTTGTACTTCGGCCTTTACCCTGAG
GGCCATGAAATTCGTGCTTTTGATTTGACAAATATGTGGATTGCAGAGAAGTTGATTGTA
GTAAACAGTGGTAATAGGCGAGAGGCTGAGGATTTGGCGGAGGATTTCCTAAATGATTTG
GTTTCTAGAAACTTGATTCAACTTGCCAAAAGGACATATAATGGAAGAATTTCAAGTTGT
CGCATACATGACTTGTTACATAGTTTGTGTGTGGACTTGGCTAAGGAAAGTAACTTCTTT
CACACCGAGCATAATGCATTTGGTGATCCCGGCAATGTTGCTAGGCTGCGAAGGATTACA
TTCTACTCTGACAATGTCATGGATGAGTTCTTCCGTTCAAATCCAAAGCTTGAGAAGCTT
CGTGTACTTTTCTGTTTCACAAAAAACCCTTCCATATTTTCTCATCTAGCTCATTTTGAC
TTCAAATTATTGCACACATTGGTTGTAGTCGTGCCTCAATATCTTAAAGAAAATGTCACT
ATCCCAAGCAAATTTGGGAACATGACTTGCTTACGCCATTTGAGATTGGAGGGGGATATT
TTTGGAAAACTGCCAAATAGTATTGTCAAGCTCACACGTCTAGAGGCCATAGATATTGAT
GGACATAGATTCATTCAACTTCCTTCTGGTGTTTGGGAGTCTAAACAATTGAGACATCTT
TGTTATAAAGATTATGGACAAGCATCTAACAGTTGCTTTTCTATAAGCTCATTTTACCCA
AACATGTACTCATTGCCTCCTAATAATCTACAAACCTTGATGTGGATACCTGATAAATTT
TTTGAACCGAGGTTGTTGCACCGATTGATCAATTTAAGAAAACTGGGTATACTGGGAGTG
TCTGATTCCACCGTTAAGATATTATCAACATTTAGTCCTGTGCCAAAGGCGCTTGAGGTT
TTGAAGCTCGCGTCTTTCAGTGACCGGAGTGAGCAAATAAACTTGTCATCCTATCCAAAT
ATTGTTCAGTTGCATTTGAATGTTTGGGGAACAATGGCCTTGAACTCTGGATCATTCCCT
CCAAATCTCGCCAAGCTTACTCTTGTCTACTTTATGGTAGACAGTTATCTACTAGCGGTA
CTTAAGACATTGCCCAAATTAAGAAAACTTAAAATGGTTGGCTGCAAGTATAATGAAGAA
AAGATGGATCTCTCGGGCGAGGCAAATGGTTATAGCTTTCTGCAACTTGAAGTTTTGCAT
ATTCATAACCCAAATGGGTTGTCTGAAGTAACATGCACGGATGATGTCAGTATGCCTAAA
TTGAAAAAGCTATTACTTACAGGAGTCGATTCCCCAATTATTTTATTGGAACGGCTTATA
AAGCTGAGTATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400034572
PEP Infomation

pacid=37456803 transcript=PGSC0003DMT400051270 locus=PGSC0003DMG400019913 ID=PGSC0003DMT400051270.v4.03 annot-version=v4.03
Sequence

MAEILLTSVINKSIEIAGNLLIQEGKHLYWLKEDIDWIQREMRHIRSYVDNAKAKEVGGD
STVKNLLKDIQELAGNVEDLLDEFLPKIQQSNKFKDAICCLKTVSFADEFAMEIEKIKRR
VIDIDRIRTTYNIIDTDNNNDDCVLSDRRRLFLHADETEVIGLDDDFNMLQAKLLDQDLH
YGVVSIVGMPGLGKTTLAKKLYRLVRDQFECSGLVYVSQQPRAGEILLGIAKEVGLTEKK
RKEHLEDNLRSLLKIKRYVIVLDDIWDVEIWDDLKLVLPECDSKVGSRIIITSRNSNVGR
YIGGEFSLHALQPLESEKSFELFTKKIFNFDENINWANASPELVNIGRSIVERCGGIPLA
IVVIAGMLRARERTEHAWNRVLESMGHKVQDGCAKALAPSYNDLPIASRPCFLYFGLYPE
GHEIRAFDLTNMWIAEKLIVVNSGNRREAEDLAEDFLNDLVSRNLIQLAKRTYNGRISSC
RIHDLLHSLCVDLAKESNFFHTEHNAFGDPGNVARLRRITFYSDNVMDEFFRSNPKLEKL
RVLFCFTKNPSIFSHLAHFDFKLLHTLVVVVPQYLKENVTIPSKFGNMTCLRHLRLEGDI
FGKLPNSIVKLTRLEAIDIDGHRFIQLPSGVWESKQLRHLCYKDYGQASNSCFSISSFYP
NMYSLPPNNLQTLMWIPDKFFEPRLLHRLINLRKLGILGVSDSTVKILSTFSPVPKALEV
LKLASFSDRSEQINLSSYPNIVQLHLNVWGTMALNSGSFPPNLAKLTLVYFMVDSYLLAV
LKTLPKLRKLKMVGCKYNEEKMDLSGEANGYSFLQLEVLHIHNPNGLSEVTCTDDVSMPK
LKKLLLTGVDSPIILLERLIKLSI*

Transcript Sequence

Transcript ID

PGSC0003DMT400051270
Transcript Infomation

pacid=37456803 locus=PGSC0003DMG400019913 ID=PGSC0003DMT400051270.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAATTCTTCTTACATCAGTAATCAATAAATCTATAGAAATAGCTGGAAATCTA
CTGATTCAAGAAGGAAAACATTTATATTGGTTGAAAGAGGACATCGATTGGATCCAGAGA
GAAATGAGACACATTCGATCATATGTAGACAACGCAAAGGCCAAGGAAGTTGGAGGAGAT
TCAACGGTGAAAAACTTATTAAAAGATATTCAAGAATTGGCAGGTAATGTGGAGGATCTC
TTAGATGAGTTCCTTCCAAAAATTCAACAATCCAATAAGTTCAAAGACGCAATTTGTTGC
CTTAAGACGGTTTCTTTTGCAGATGAGTTTGCTATGGAGATTGAGAAGATAAAAAGAAGG
GTTATTGACATTGACCGTATAAGGACAACTTACAACATCATAGATACAGATAACAATAAT
GATGATTGTGTTCTATCGGACCGGAGAAGATTATTCCTTCATGCTGATGAAACAGAGGTC
ATCGGTTTGGATGATGACTTCAATATGCTACAAGCCAAATTACTTGATCAAGATTTGCAT
TATGGAGTTGTTTCCATAGTTGGCATGCCCGGTCTGGGGAAAACAACTCTTGCCAAGAAA
CTTTATAGGCTCGTTCGTGATCAATTTGAGTGTTCTGGACTGGTCTACGTTTCACAACAG
CCAAGAGCGGGAGAAATCTTACTCGGCATAGCCAAGGAAGTTGGACTGACGGAAAAGAAA
AGGAAGGAACATTTGGAGGACAACCTGCGATCACTCTTGAAAATAAAAAGGTATGTTATC
GTCCTAGATGACATTTGGGATGTTGAAATTTGGGATGATCTGAAACTTGTCCTTCCCGAA
TGTGATTCAAAAGTTGGCAGTAGAATAATTATCACGTCTCGAAATAGTAATGTAGGCAGA
TACATAGGAGGGGAATTCTCCCTCCATGCATTGCAACCCCTAGAATCGGAAAAAAGCTTT
GAGCTCTTTACCAAGAAAATCTTTAATTTTGATGAAAATATTAATTGGGCCAATGCTTCA
CCTGAGTTGGTAAATATTGGTAGAAGTATAGTTGAGAGATGTGGAGGTATACCGCTAGCC
ATAGTGGTGATTGCAGGCATGTTAAGAGCAAGAGAAAGAACAGAACATGCGTGGAACAGA
GTACTTGAGAGTATGGGCCATAAAGTTCAAGATGGATGTGCTAAGGCATTGGCTCCGAGT
TACAATGACTTGCCTATTGCATCAAGGCCATGTTTCTTGTACTTCGGCCTTTACCCTGAG
GGCCATGAAATTCGTGCTTTTGATTTGACAAATATGTGGATTGCAGAGAAGTTGATTGTA
GTAAACAGTGGTAATAGGCGAGAGGCTGAGGATTTGGCGGAGGATTTCCTAAATGATTTG
GTTTCTAGAAACTTGATTCAACTTGCCAAAAGGACATATAATGGAAGAATTTCAAGTTGT
CGCATACATGACTTGTTACATAGTTTGTGTGTGGACTTGGCTAAGGAAAGTAACTTCTTT
CACACCGAGCATAATGCATTTGGTGATCCCGGCAATGTTGCTAGGCTGCGAAGGATTACA
TTCTACTCTGACAATGTCATGGATGAGTTCTTCCGTTCAAATCCAAAGCTTGAGAAGCTT
CGTGTACTTTTCTGTTTCACAAAAAACCCTTCCATATTTTCTCATCTAGCTCATTTTGAC
TTCAAATTATTGCACACATTGGTTGTAGTCGTGCCTCAATATCTTAAAGAAAATGTCACT
ATCCCAAGCAAATTTGGGAACATGACTTGCTTACGCCATTTGAGATTGGAGGGGGATATT
TTTGGAAAACTGCCAAATAGTATTGTCAAGCTCACACGTCTAGAGGCCATAGATATTGAT
GGACATAGATTCATTCAACTTCCTTCTGGTGTTTGGGAGTCTAAACAATTGAGACATCTT
TGTTATAAAGATTATGGACAAGCATCTAACAGTTGCTTTTCTATAAGCTCATTTTACCCA
AACATGTACTCATTGCCTCCTAATAATCTACAAACCTTGATGTGGATACCTGATAAATTT
TTTGAACCGAGGTTGTTGCACCGATTGATCAATTTAAGAAAACTGGGTATACTGGGAGTG
TCTGATTCCACCGTTAAGATATTATCAACATTTAGTCCTGTGCCAAAGGCGCTTGAGGTT
TTGAAGCTCGCGTCTTTCAGTGACCGGAGTGAGCAAATAAACTTGTCATCCTATCCAAAT
ATTGTTCAGTTGCATTTGAATGTTTGGGGAACAATGGCCTTGAACTCTGGATCATTCCCT
CCAAATCTCGCCAAGCTTACTCTTGTCTACTTTATGGTAGACAGTTATCTACTAGCGGTA
CTTAAGACATTGCCCAAATTAAGAAAACTTAAAATGGTTGGCTGCAAGTATAATGAAGAA
AAGATGGATCTCTCGGGCGAGGCAAATGGTTATAGCTTTCTGCAACTTGAAGTTTTGCAT
ATTCATAACCCAAATGGGTTGTCTGAAGTAACATGCACGGATGATGTCAGTATGCCTAAA
TTGAAAAAGCTATTACTTACAGGAGTCGATTCCCCAATTATTTTATTGGAACGGCTTATA
AAGCTGAGTATATGA