Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051268
CDS Infomation

pacid=37457828 polypeptide=PGSC0003DMP400034570 locus=PGSC0003DMG400019912 ID=PGSC0003DMT400051268.v4.03 annot-version=v4.03
Sequence

ATGTCTCCATCACGACAAGAACATTACGAATTTCATCATGATAATAGGCAAAAAACAATA
ATGTTTGAGATTGTTGTTGCTTCTATGAATGAAATGGTTGAACTTTGGAAAAGGAATGAT
CCAATTTGGGTGGAATCATCAAGTGAAGGGAGGTGTTCTATTCATCGTGAGAGTTATGAA
AGAACATTTCCAAATCCAAATCGACCTTATTACCAATCACCAGCTACTCAAATTGAATCA
TCAAAGGATTCTGAAGTTGTGTCAATGACTGCAATTGAGTTAATCCATAATTTTCTTGAT
CCAGTCAAATGGATGAACTTGTTTCCTACTATAGTCACAAAAGCTAGGACTATTGAAGTT
CTTGATTCTGGGACTTGGGGAGGCTCTATACAATTGATGTATGAAAAGTTGCATATTTTA
TCTCCTCTAGTTGAAGCTAGAGATTTTTTCTTCATACGTTGTTGTAGACAACTTGATCCA
ACAACATGGATCATGATGGATGTTTCATATGATTTATTCAATGAGATTCAAAGCGGTGTA
CCTTCTTATTCTTGGAAGTTCCCTTCTGGTTGTGCAATTCAAGATATGGGCAATGGCCAA
AGTAAGGTTACTTGGGTGGAACATGTTCAAGTATATGAAAAAAATCAAGTACATCATATC
TTTAGAGACTTGTTGTGTGATCGTCAAACATACGGAGCTAAAAGATGGATTGTTACACTT
CAAAGGATGTCTGAGAGATATAATTTTGCTATGGGTGCAATATGCCCTACTAGGCATGAT
TTTAAAGGAGAAGGGCTGAAAAATACAATACAAATATCTCAAAGGATGGTGAAGAGCTTT
TTTGAAATCCTAAGCATGACAGACAACTTAGATTTTCCAACTTCATCACGGCTCAACCGC
GGAGATAGGATTTCAATAAGAAAAAATGAAGAAATTGTCCAACCAAAAGGCTTTATTGCC
ACTGCTGCTACTTCTTTGTGGCTTCCTCTTTCATTCCAAGATGTCTTCAATTTCTTCAAA
GATGACAAGACAAGAAGTCAGTGGGATATTTTGACCGGTGGAAATAATGTGATTGAGTTA
GCTCAAGTACTAACAGGAGTTCATCCAGGAAACAGTATTACAATCATTCAGCCTTGTATG
CAAAAGGAAATGTTAGTGCTTCAAGAGACAAGCATTGATAGTATGGGAGCATTTTTAGTC
TATGCACCCATAAAGTTACCAACGGTCACTTCAATTGTCAATGGAGGTGATGCAACAAAA
GTTCCCATTTTGCCCTCAGGTATCATCATAAGTCCTGACGGTCGCCTCTCCTCGGATAGG
GACAGTACTGCAAATGCAGAAAATGGTTCAATTTTGACAGTGACTTTTCAAATATTGATT
AGTGGTCATAATAATCCAACCTCCCAGAAGCAACAAATGGAGGTAGTGGCTTCTGTTCAT
TGCCTTTTGAGCAGCATAATTTTAAAAATCAAAGCAGCATTGGGTTGCTCTGATTTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400034570
PEP Infomation

pacid=37457828 transcript=PGSC0003DMT400051268 locus=PGSC0003DMG400019912 ID=PGSC0003DMT400051268.v4.03 annot-version=v4.03
Sequence

MSPSRQEHYEFHHDNRQKTIMFEIVVASMNEMVELWKRNDPIWVESSSEGRCSIHRESYE
RTFPNPNRPYYQSPATQIESSKDSEVVSMTAIELIHNFLDPVKWMNLFPTIVTKARTIEV
LDSGTWGGSIQLMYEKLHILSPLVEARDFFFIRCCRQLDPTTWIMMDVSYDLFNEIQSGV
PSYSWKFPSGCAIQDMGNGQSKVTWVEHVQVYEKNQVHHIFRDLLCDRQTYGAKRWIVTL
QRMSERYNFAMGAICPTRHDFKGEGLKNTIQISQRMVKSFFEILSMTDNLDFPTSSRLNR
GDRISIRKNEEIVQPKGFIATAATSLWLPLSFQDVFNFFKDDKTRSQWDILTGGNNVIEL
AQVLTGVHPGNSITIIQPCMQKEMLVLQETSIDSMGAFLVYAPIKLPTVTSIVNGGDATK
VPILPSGIIISPDGRLSSDRDSTANAENGSILTVTFQILISGHNNPTSQKQQMEVVASVH
CLLSSIILKIKAALGCSDL*

Transcript Sequence

Transcript ID

PGSC0003DMT400051268
Transcript Infomation

pacid=37457828 locus=PGSC0003DMG400019912 ID=PGSC0003DMT400051268.v4.03 annot-version=v4.03
Sequence

ATGTCTCCATCACGACAAGAACATTACGAATTTCATCATGATAATAGGCAAAAAACAATA
ATGTTTGAGATTGTTGTTGCTTCTATGAATGAAATGGTTGAACTTTGGAAAAGGAATGAT
CCAATTTGGGTGGAATCATCAAGTGAAGGGAGGTGTTCTATTCATCGTGAGAGTTATGAA
AGAACATTTCCAAATCCAAATCGACCTTATTACCAATCACCAGCTACTCAAATTGAATCA
TCAAAGGATTCTGAAGTTGTGTCAATGACTGCAATTGAGTTAATCCATAATTTTCTTGAT
CCAGTCAAATGGATGAACTTGTTTCCTACTATAGTCACAAAAGCTAGGACTATTGAAGTT
CTTGATTCTGGGACTTGGGGAGGCTCTATACAATTGATGTATGAAAAGTTGCATATTTTA
TCTCCTCTAGTTGAAGCTAGAGATTTTTTCTTCATACGTTGTTGTAGACAACTTGATCCA
ACAACATGGATCATGATGGATGTTTCATATGATTTATTCAATGAGATTCAAAGCGGTGTA
CCTTCTTATTCTTGGAAGTTCCCTTCTGGTTGTGCAATTCAAGATATGGGCAATGGCCAA
AGTAAGGTTACTTGGGTGGAACATGTTCAAGTATATGAAAAAAATCAAGTACATCATATC
TTTAGAGACTTGTTGTGTGATCGTCAAACATACGGAGCTAAAAGATGGATTGTTACACTT
CAAAGGATGTCTGAGAGATATAATTTTGCTATGGGTGCAATATGCCCTACTAGGCATGAT
TTTAAAGGAGAAGGGCTGAAAAATACAATACAAATATCTCAAAGGATGGTGAAGAGCTTT
TTTGAAATCCTAAGCATGACAGACAACTTAGATTTTCCAACTTCATCACGGCTCAACCGC
GGAGATAGGATTTCAATAAGAAAAAATGAAGAAATTGTCCAACCAAAAGGCTTTATTGCC
ACTGCTGCTACTTCTTTGTGGCTTCCTCTTTCATTCCAAGATGTCTTCAATTTCTTCAAA
GATGACAAGACAAGAAGTCAGTGGGATATTTTGACCGGTGGAAATAATGTGATTGAGTTA
GCTCAAGTACTAACAGGAGTTCATCCAGGAAACAGTATTACAATCATTCAGCCTTGTATG
CAAAAGGAAATGTTAGTGCTTCAAGAGACAAGCATTGATAGTATGGGAGCATTTTTAGTC
TATGCACCCATAAAGTTACCAACGGTCACTTCAATTGTCAATGGAGGTGATGCAACAAAA
GTTCCCATTTTGCCCTCAGGTATCATCATAAGTCCTGACGGTCGCCTCTCCTCGGATAGG
GACAGTACTGCAAATGCAGAAAATGGTTCAATTTTGACAGTGACTTTTCAAATATTGATT
AGTGGTCATAATAATCCAACCTCCCAGAAGCAACAAATGGAGGTAGTGGCTTCTGTTCAT
TGCCTTTTGAGCAGCATAATTTTAAAAATCAAAGCAGCATTGGGTTGCTCTGATTTATGA