Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051238
CDS Infomation

pacid=37426364 polypeptide=PGSC0003DMP400034548 locus=PGSC0003DMG400019898 ID=PGSC0003DMT400051238.v4.03 annot-version=v4.03
Sequence

ATGGGAATATCATCAAAGTTACAAGTTATTTCTGTGTTGTTAGTTGGCCTACTGGCTTTG
GAGGCTGTGTCTTATAATTTTAACTATGGAGATGCCATGGACAAAACCTTGCTATTCTTT
GAGGCACAAAGGTCTGGAAAATTGCCACCGAATCAACGTGTCAAATGGCGCGGCGATTCA
GGCCTTAAGGATGGTTTTCTCCAAGGGGTGAATTTGGTGGGAGGGTACTATGATGCAGGA
GATCATGTAAAATTTGGATTGCCTATGGCATATAGTTTGACAATGCTAGGATGGAGTGTT
GTTGACTACAGGAAAGAAATAGCAGACCTTAATCAGATGGGAAATACCTTGGCTGCTATT
AAATGGGGTACTGATTACTTCATCAAAGCCCATACTCAGCCCAATGTCCTCTGGGCTCAG
GTGGGAGATGGTGATTCTGATCACTATTGTTGGGAGAGAGCAGAAGATATGACAACACCA
AGAACTGCTTACAAGCTTGATCCTAGCCACCCTGGTTCTGACCTTGCTGGTGAAGCTGCT
GCTGCTTTGGCTGCTGCCTCTCTTGCATTCAAGCCTTATGACTCTTCTTACTCTAATCTC
CTTTTAGTCCATGCAAAACAGCTATTCTCATTTGCGGATACCTTCAGAGGTTTGTATGAT
GATTCCATTCCAAATGCTCAAGCATTCTACACATCATCTGGTTATTCGGACGAGCTTCTA
TGGGCTGCTGCATGGCTCTATCGAGCAACTTATGATGAGTACTACTTAAAGTATGTGGTG
GACAATGCGGTATCTTTGGGAGGAACTGGATGGGCAGTCAAGGAATTTTCCTGGGACAAC
AAGTATGCTGGTGTTCAAATTCTTCTGACCAAGATTCTCTTAGACGGAGCTGGTGGATCA
TACACTCCAACATTGAAACAGTATCAGGCTAAAGCAGATTACTTTACCTGTGCTTGTTTG
CAGAAAAATGATGGATACAACGTAGCCCTGACTCCTGGAGGCCTGATCTATGTTCGTGAA
TGGAATAATCTGCAATACGCTTCATCAGCTGCTTTCCTACTCGCCATGTACTCCGATTAT
CTTTCTGAGAAAAAAATTGTATTAACATGTCCTGAAGGTCAAGTTCAACCATCAGATGTC
CTCTCATTTGCTAAATCACAGGCTGATTACATTCTTGGTAAAAATCCCAAGGCCATTAGC
TACTTAGTTGGTTATGGACAAAACTACCCAATCCACGTTCACCACAGAGGCGCCTCCATT
GCCCCTATTTCAGTACTACATACTGCTGTTAGTTGTATAGAAGGATTTGAGACTTGGTAT
CGCCGCCCTCAGGCAAATCCCAATATTATCCACGGTGCCCTTTTGGGAGGTCCAAGCAAA
ACTGATGACTTCAGTGATGACAGGTCCAATTATGAACAAACTGAACCAACATTATCTGGT
TCAGCTCCTCTTATAGGACTCTTCGTCAAGTTGCAGTCCCTCTCAGGCTATCCAGGTTCT
TATCGTCATACATCACCAACACCATACCAGAAGCCTCCAGCTTCCTATCACCCACAGCCA
TCAACACCCTACTACAAGGCTCCAGGATCATCAAACTATAAAGCTCCAGGTGCACCAGTG
ACATTCTTGCACTCCATAATTTCTACATGGACAATTGGTCCAACAACTTACTACAAGCAC
AGAGTGGTGGTGAAGAACACATCTCAAAAGCAAATCACAAATCTTAAGTTAATAATTGAA
AACCTTTCAGGATCATTGTGGGGGCTTAGTCCATGCCCAGAGAAGAACACATATGAGCTT
CCTCAATGGATTAAAATACTAAAACCTGGTTCAGAACTCACTTTTGTATATGTTCAAGGA
GGTGCTCAAGCCAAGGTTTCAATAAAGAGCTACCACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400034548
PEP Infomation

pacid=37426364 transcript=PGSC0003DMT400051238 locus=PGSC0003DMG400019898 ID=PGSC0003DMT400051238.v4.03 annot-version=v4.03
Sequence

MGISSKLQVISVLLVGLLALEAVSYNFNYGDAMDKTLLFFEAQRSGKLPPNQRVKWRGDS
GLKDGFLQGVNLVGGYYDAGDHVKFGLPMAYSLTMLGWSVVDYRKEIADLNQMGNTLAAI
KWGTDYFIKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPRTAYKLDPSHPGSDLAGEAA
AALAAASLAFKPYDSSYSNLLLVHAKQLFSFADTFRGLYDDSIPNAQAFYTSSGYSDELL
WAAAWLYRATYDEYYLKYVVDNAVSLGGTGWAVKEFSWDNKYAGVQILLTKILLDGAGGS
YTPTLKQYQAKADYFTCACLQKNDGYNVALTPGGLIYVREWNNLQYASSAAFLLAMYSDY
LSEKKIVLTCPEGQVQPSDVLSFAKSQADYILGKNPKAISYLVGYGQNYPIHVHHRGASI
APISVLHTAVSCIEGFETWYRRPQANPNIIHGALLGGPSKTDDFSDDRSNYEQTEPTLSG
SAPLIGLFVKLQSLSGYPGSYRHTSPTPYQKPPASYHPQPSTPYYKAPGSSNYKAPGAPV
TFLHSIISTWTIGPTTYYKHRVVVKNTSQKQITNLKLIIENLSGSLWGLSPCPEKNTYEL
PQWIKILKPGSELTFVYVQGGAQAKVSIKSYH*

Transcript Sequence

Transcript ID

PGSC0003DMT400051238
Transcript Infomation

pacid=37426364 locus=PGSC0003DMG400019898 ID=PGSC0003DMT400051238.v4.03 annot-version=v4.03
Sequence

ATGGGAATATCATCAAAGTTACAAGTTATTTCTGTGTTGTTAGTTGGCCTACTGGCTTTG
GAGGCTGTGTCTTATAATTTTAACTATGGAGATGCCATGGACAAAACCTTGCTATTCTTT
GAGGCACAAAGGTCTGGAAAATTGCCACCGAATCAACGTGTCAAATGGCGCGGCGATTCA
GGCCTTAAGGATGGTTTTCTCCAAGGGGTGAATTTGGTGGGAGGGTACTATGATGCAGGA
GATCATGTAAAATTTGGATTGCCTATGGCATATAGTTTGACAATGCTAGGATGGAGTGTT
GTTGACTACAGGAAAGAAATAGCAGACCTTAATCAGATGGGAAATACCTTGGCTGCTATT
AAATGGGGTACTGATTACTTCATCAAAGCCCATACTCAGCCCAATGTCCTCTGGGCTCAG
GTGGGAGATGGTGATTCTGATCACTATTGTTGGGAGAGAGCAGAAGATATGACAACACCA
AGAACTGCTTACAAGCTTGATCCTAGCCACCCTGGTTCTGACCTTGCTGGTGAAGCTGCT
GCTGCTTTGGCTGCTGCCTCTCTTGCATTCAAGCCTTATGACTCTTCTTACTCTAATCTC
CTTTTAGTCCATGCAAAACAGCTATTCTCATTTGCGGATACCTTCAGAGGTTTGTATGAT
GATTCCATTCCAAATGCTCAAGCATTCTACACATCATCTGGTTATTCGGACGAGCTTCTA
TGGGCTGCTGCATGGCTCTATCGAGCAACTTATGATGAGTACTACTTAAAGTATGTGGTG
GACAATGCGGTATCTTTGGGAGGAACTGGATGGGCAGTCAAGGAATTTTCCTGGGACAAC
AAGTATGCTGGTGTTCAAATTCTTCTGACCAAGATTCTCTTAGACGGAGCTGGTGGATCA
TACACTCCAACATTGAAACAGTATCAGGCTAAAGCAGATTACTTTACCTGTGCTTGTTTG
CAGAAAAATGATGGATACAACGTAGCCCTGACTCCTGGAGGCCTGATCTATGTTCGTGAA
TGGAATAATCTGCAATACGCTTCATCAGCTGCTTTCCTACTCGCCATGTACTCCGATTAT
CTTTCTGAGAAAAAAATTGTATTAACATGTCCTGAAGGTCAAGTTCAACCATCAGATGTC
CTCTCATTTGCTAAATCACAGGCTGATTACATTCTTGGTAAAAATCCCAAGGCCATTAGC
TACTTAGTTGGTTATGGACAAAACTACCCAATCCACGTTCACCACAGAGGCGCCTCCATT
GCCCCTATTTCAGTACTACATACTGCTGTTAGTTGTATAGAAGGATTTGAGACTTGGTAT
CGCCGCCCTCAGGCAAATCCCAATATTATCCACGGTGCCCTTTTGGGAGGTCCAAGCAAA
ACTGATGACTTCAGTGATGACAGGTCCAATTATGAACAAACTGAACCAACATTATCTGGT
TCAGCTCCTCTTATAGGACTCTTCGTCAAGTTGCAGTCCCTCTCAGGCTATCCAGGTTCT
TATCGTCATACATCACCAACACCATACCAGAAGCCTCCAGCTTCCTATCACCCACAGCCA
TCAACACCCTACTACAAGGCTCCAGGATCATCAAACTATAAAGCTCCAGGTGCACCAGTG
ACATTCTTGCACTCCATAATTTCTACATGGACAATTGGTCCAACAACTTACTACAAGCAC
AGAGTGGTGGTGAAGAACACATCTCAAAAGCAAATCACAAATCTTAAGTTAATAATTGAA
AACCTTTCAGGATCATTGTGGGGGCTTAGTCCATGCCCAGAGAAGAACACATATGAGCTT
CCTCAATGGATTAAAATACTAAAACCTGGTTCAGAACTCACTTTTGTATATGTTCAAGGA
GGTGCTCAAGCCAAGGTTTCAATAAAGAGCTACCACTAA