Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051208
CDS Infomation

pacid=37432664 polypeptide=PGSC0003DMP400034529 locus=PGSC0003DMG400019889 ID=PGSC0003DMT400051208.v4.03 annot-version=v4.03
Sequence

ATGTCGGATAGATTGACGCGTATCGCCATCGTTAGCGCCGACAAGTGCAAACCGAAGAAG
TGCCGCCAAGAATGCAAGAAGAGCTGCCCAGTTGTTAAAACTGGTAAGTTATGTATAGAG
GTCACTGTAGGCTCGAAGATTGCTTTCATCTCAGAAGAGCTGTGTATTGGATGTGGTATT
TGTGTAAAGAAATGCCCATTTGAGGCAATTCAGATCATCAATCTGCCAAAAGATCTAGAT
AAGGATACAACCCATCGTTATGGTCCCAACACTTTCAAATTGCACAGGTTACCTGTCCCT
AGGCCAGGACAGGTTCTTGGTCTGGTTGGCACAAATGGAATTGGAAAGTCAACTGCCCTA
AAAGTTTTGGCTGGAAAATTGAAACCAAACTTGGGGCGCTTCACGAACCCTCCTGATTGG
CAAGAAATCTTGACTCACTTTCGAGGATCCGAATTGCAGAACTACTTCACTCGCATTCTG
GAAGATAACTTAAAGGCAATTATCAAGCCTCAGTATGTTGACCATATTCCAAAGGCAGTT
CAAGGAAACGTCGGACAAGTGCTTGACCAAAAAGATGAGAGAGACGTGAAGGAAAAACTC
TGTTTTGATCTAGAGCTGAATCAGGTTTTGGATCGTAATGTAGGTGATCTATCTGGTGGA
GAGCTTCAGAGGTTTGCTATTGCTGTTGTTGCAATACAAAATGCAGAGATATACATGTTT
GATGAGCCTTCAAGTTACCTTGATGTGAAGCAGAGGCTTAAAGCTGCCCAAGTTGTCAGA
TCCTTGCTTCGACCAAATAGCTATGTCATCGTTGTGGAGCATGATCTTAGCGTGCTTGAT
TATTTGTCGGATTTCATTTGCTGCTTATATGGGAAGCCTGGTGCATACGGAGTTGTGACC
CTACCCTTCTCAGTTAGGGAAGGAATTAATATATTTTTGGCTGGGTTTGTGCCTACAGAA
AATCTACGTTTCCGTGACGAGTCTCTTACTTTTAAGGTTGCTGAGACCCCACAAGAGGCT
GCTGAGGAAATTGAATCATATGCACGTTACAGATATCCAACCATGACAAAGACTCAGGGT
AATTTCAAGCTTAAGGTTGCCGAGGGTGAATTTACTGATTCACAGATTGTTGTGATGCTT
GGTGAGAATGGGACTGGGAAGACTACCTTCATTCGCATGCTGGCTGGTCTATTAAAGCCT
GACGTGGTGGAAGGATCTGATATTGACATACCAGAGTTCAATGTTTCATACAAGCCCCAG
AAAATTAGTCCAAAATTTCAATCCACCGTGAGGCATTTGCTACATCAAAAAATACGTGAT
TCTTATCAACACCCCCAGTTTTGTTCAGATGTGATGAAGCCTCTCCAAATTGAGCAATTG
ATGGACCAAGAAGTTGTGAATCTTTCTGGTGGTGAGTTGCAAAGAGTTGCCTTAGCCCTG
TGCCTTGGAAAGCCCGCTGATATATATCTGATCGATGAGCCAAGTGCCTATCTTGATTCT
GAGCAACGTATTGTAGCTTCTAAAGTCATCAAGAGATTCATTCTTCACGCAAAGAAGACT
GCATTTGTTGTAGAGCATGACTTTATAATGGCAACTTACCTGGCAGATAGAGTCATTGTA
TATGAGGGGACGCCTTCCATAGATTGTAATGCAAATGCACCTCAATCACTGTTGACTGGA
ATGAACTTATTTTTATCACATCTGAACATTACATTTCGAAGGGACCCAACTAATTTCCGT
CCAAGGATCAACAAACTGGAATCAACCAAGGATAGGGAGCAGAAGTCAGCTGGATCTTAT
TATTACTTGGATGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400034529
PEP Infomation

pacid=37432664 transcript=PGSC0003DMT400051208 locus=PGSC0003DMG400019889 ID=PGSC0003DMT400051208.v4.03 annot-version=v4.03
Sequence

MSDRLTRIAIVSADKCKPKKCRQECKKSCPVVKTGKLCIEVTVGSKIAFISEELCIGCGI
CVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KVLAGKLKPNLGRFTNPPDWQEILTHFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV
QGNVGQVLDQKDERDVKEKLCFDLELNQVLDRNVGDLSGGELQRFAIAVVAIQNAEIYMF
DEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT
LPFSVREGINIFLAGFVPTENLRFRDESLTFKVAETPQEAAEEIESYARYRYPTMTKTQG
NFKLKVAEGEFTDSQIVVMLGENGTGKTTFIRMLAGLLKPDVVEGSDIDIPEFNVSYKPQ
KISPKFQSTVRHLLHQKIRDSYQHPQFCSDVMKPLQIEQLMDQEVVNLSGGELQRVALAL
CLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFVVEHDFIMATYLADRVIV
YEGTPSIDCNANAPQSLLTGMNLFLSHLNITFRRDPTNFRPRINKLESTKDREQKSAGSY
YYLDD*

Transcript Sequence

Transcript ID

PGSC0003DMT400051208
Transcript Infomation

pacid=37432664 locus=PGSC0003DMG400019889 ID=PGSC0003DMT400051208.v4.03 annot-version=v4.03
Sequence

ATGTCGGATAGATTGACGCGTATCGCCATCGTTAGCGCCGACAAGTGCAAACCGAAGAAG
TGCCGCCAAGAATGCAAGAAGAGCTGCCCAGTTGTTAAAACTGGTAAGTTATGTATAGAG
GTCACTGTAGGCTCGAAGATTGCTTTCATCTCAGAAGAGCTGTGTATTGGATGTGGTATT
TGTGTAAAGAAATGCCCATTTGAGGCAATTCAGATCATCAATCTGCCAAAAGATCTAGAT
AAGGATACAACCCATCGTTATGGTCCCAACACTTTCAAATTGCACAGGTTACCTGTCCCT
AGGCCAGGACAGGTTCTTGGTCTGGTTGGCACAAATGGAATTGGAAAGTCAACTGCCCTA
AAAGTTTTGGCTGGAAAATTGAAACCAAACTTGGGGCGCTTCACGAACCCTCCTGATTGG
CAAGAAATCTTGACTCACTTTCGAGGATCCGAATTGCAGAACTACTTCACTCGCATTCTG
GAAGATAACTTAAAGGCAATTATCAAGCCTCAGTATGTTGACCATATTCCAAAGGCAGTT
CAAGGAAACGTCGGACAAGTGCTTGACCAAAAAGATGAGAGAGACGTGAAGGAAAAACTC
TGTTTTGATCTAGAGCTGAATCAGGTTTTGGATCGTAATGTAGGTGATCTATCTGGTGGA
GAGCTTCAGAGGTTTGCTATTGCTGTTGTTGCAATACAAAATGCAGAGATATACATGTTT
GATGAGCCTTCAAGTTACCTTGATGTGAAGCAGAGGCTTAAAGCTGCCCAAGTTGTCAGA
TCCTTGCTTCGACCAAATAGCTATGTCATCGTTGTGGAGCATGATCTTAGCGTGCTTGAT
TATTTGTCGGATTTCATTTGCTGCTTATATGGGAAGCCTGGTGCATACGGAGTTGTGACC
CTACCCTTCTCAGTTAGGGAAGGAATTAATATATTTTTGGCTGGGTTTGTGCCTACAGAA
AATCTACGTTTCCGTGACGAGTCTCTTACTTTTAAGGTTGCTGAGACCCCACAAGAGGCT
GCTGAGGAAATTGAATCATATGCACGTTACAGATATCCAACCATGACAAAGACTCAGGGT
AATTTCAAGCTTAAGGTTGCCGAGGGTGAATTTACTGATTCACAGATTGTTGTGATGCTT
GGTGAGAATGGGACTGGGAAGACTACCTTCATTCGCATGCTGGCTGGTCTATTAAAGCCT
GACGTGGTGGAAGGATCTGATATTGACATACCAGAGTTCAATGTTTCATACAAGCCCCAG
AAAATTAGTCCAAAATTTCAATCCACCGTGAGGCATTTGCTACATCAAAAAATACGTGAT
TCTTATCAACACCCCCAGTTTTGTTCAGATGTGATGAAGCCTCTCCAAATTGAGCAATTG
ATGGACCAAGAAGTTGTGAATCTTTCTGGTGGTGAGTTGCAAAGAGTTGCCTTAGCCCTG
TGCCTTGGAAAGCCCGCTGATATATATCTGATCGATGAGCCAAGTGCCTATCTTGATTCT
GAGCAACGTATTGTAGCTTCTAAAGTCATCAAGAGATTCATTCTTCACGCAAAGAAGACT
GCATTTGTTGTAGAGCATGACTTTATAATGGCAACTTACCTGGCAGATAGAGTCATTGTA
TATGAGGGGACGCCTTCCATAGATTGTAATGCAAATGCACCTCAATCACTGTTGACTGGA
ATGAACTTATTTTTATCACATCTGAACATTACATTTCGAAGGGACCCAACTAATTTCCGT
CCAAGGATCAACAAACTGGAATCAACCAAGGATAGGGAGCAGAAGTCAGCTGGATCTTAT
TATTACTTGGATGATTAA