Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051170
CDS Infomation

pacid=37425141 polypeptide=PGSC0003DMP400034509 locus=PGSC0003DMG400019873 ID=PGSC0003DMT400051170.v4.03 annot-version=v4.03
Sequence

ATGGAATCGGAAGCTTCATCGTTCGAGTCTAGTGAGACTTTGGCAGCTCTTGTGGCATCG
ACGCCGTTGCTGGAGGAGTCATGGAAGGTTTGTGGCGTCGCCGATGCATTGGTCGATAGC
AATTTCGCCGTCAATCGAGTTGGTGGGACAGCCTATGTGGGATTCTCCGGCGTAAAATTG
GGCGCCGGAGTGGACCAAAGTTGCCTGAATTTAGTGCCGCTTCCGGATGAACTTTTCTCT
TCGTTGTGCTTGGATGGGGCGGATCCGGCAATGGTCCATGCCGGATTATTGCAACTTTTT
CAATCAGTTTACAGCGACAATTTATTCCGTGATCAGATGGTAGAAATAATGAACACAAGC
AAGTCAATAGTCATAACAGGACACTCAATTGGAGGAGCAATTGCATCCCTCTTAACTCTC
TGGCTTCTCTGCCGTCTGCAAACTATTTGCTCTGTCATTTGCATTACCTTTGGCTCTCCA
ATGCTTGGCAATGAGTCCTTTTCCAGAGTCATTCTTCAAAAAAGATGGGCTGGACATTTT
TGTCATGTTGTTTCACAGCATGATATTGTCCCAAGACTGTTCTTTTCCCCATCATGTTCT
TTCCAGTTTATTTCTGAGGAAAACAAGACTCAGCTTTTCCGCGTTGTGTTGGATTCTCTT
GGAGTTGTATCAAGAGGTGAATGTAAGAGTTCATTTTGTCCCTCTGGGAGCTACTTGTTC
TGCACCAACAATGGTGCAGTTTGTGTCGATAATGGGATGGTTGTCATTAAGTTGCTTTAC
TTGACCTTACTGAATGGCTCGCAAAGTTCTAGCCTTGAGGATCATCTTGGTTATGCTGAT
TTCATTCGGAAAGTTCAGTGGCAATTTATAGAGAATAGAAGCTTCATGGGAGGCAATATA
CCGGAGTCGAGCTATGAAGCAGGGATAACATTGGCACTGGAGTCACTAGGAATAGCTTCT
CATGAATTGAATTCCGAAGATGCTAAGGAAGCCCTGAAAAAGGCAAAAAAGTTGGGTCGA
ACTCGCAACCTCAACAGCGCCAACCTTGCAATTGGTTTATCCAAAATCAATCCATTCAGA
GCACAGATAGAGTGGTATAAAACATCTTGTGACAATTCTGTTGAACAAATGGGATATTAC
GATTCATTCAAGCAAAGAGGTGCCTCGAGAAGAGGCTTTAAGGTCAATATGAACAGGATC
AAACTTGGTCAGTTTTGGGATTCTTTGATTGACAAGTTGGAGGCTAATGAACTGCCGTAT
GATTTTCACAAACGTGCAAAGTGGGTAAATGCTTCTCAGTTCTACAAACTCGTTGTCGAG
CCACTTGATATTGCAGAGTACTACAGGACTGGGATGCATCTTGTGAAAGGCCACTACATG
CAGCATGGAAGGGAGAGAAGGTACAAGATTTTCGACAAGTGGTGGAACACTGAGAATGGC
ACTGATCATCCTACTGCAAGGAGCCGGTTTGCAAGTTCTACACAAGATTCATGCTTTTGG
GCTCAAGTTGAGGAGGCAAGAGACGGTCTTATTAAGGTAAGAGCTGAAAGCGATGCAAGA
AAGTTTATCAAGATGTTGGAAGATGTCACAAAGTTTGATCAATATGCTAAAAGATTGATC
GAAAATAAGGAGGTTTCGCAAGATGTTTTGGCCAAAAACTCAAGCTACACTAAGTTTATA
GAGGAATGGAATGATTTCCAGTCTCAGTTACAGCTGCTCCAACCTCAGTTTCCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400034509
PEP Infomation

pacid=37425141 transcript=PGSC0003DMT400051170 locus=PGSC0003DMG400019873 ID=PGSC0003DMT400051170.v4.03 annot-version=v4.03
Sequence

MESEASSFESSETLAALVASTPLLEESWKVCGVADALVDSNFAVNRVGGTAYVGFSGVKL
GAGVDQSCLNLVPLPDELFSSLCLDGADPAMVHAGLLQLFQSVYSDNLFRDQMVEIMNTS
KSIVITGHSIGGAIASLLTLWLLCRLQTICSVICITFGSPMLGNESFSRVILQKRWAGHF
CHVVSQHDIVPRLFFSPSCSFQFISEENKTQLFRVVLDSLGVVSRGECKSSFCPSGSYLF
CTNNGAVCVDNGMVVIKLLYLTLLNGSQSSSLEDHLGYADFIRKVQWQFIENRSFMGGNI
PESSYEAGITLALESLGIASHELNSEDAKEALKKAKKLGRTRNLNSANLAIGLSKINPFR
AQIEWYKTSCDNSVEQMGYYDSFKQRGASRRGFKVNMNRIKLGQFWDSLIDKLEANELPY
DFHKRAKWVNASQFYKLVVEPLDIAEYYRTGMHLVKGHYMQHGRERRYKIFDKWWNTENG
TDHPTARSRFASSTQDSCFWAQVEEARDGLIKVRAESDARKFIKMLEDVTKFDQYAKRLI
ENKEVSQDVLAKNSSYTKFIEEWNDFQSQLQLLQPQFP*

Transcript Sequence

Transcript ID

PGSC0003DMT400051170
Transcript Infomation

pacid=37425141 locus=PGSC0003DMG400019873 ID=PGSC0003DMT400051170.v4.03 annot-version=v4.03
Sequence

ATGGAATCGGAAGCTTCATCGTTCGAGTCTAGTGAGACTTTGGCAGCTCTTGTGGCATCG
ACGCCGTTGCTGGAGGAGTCATGGAAGGTTTGTGGCGTCGCCGATGCATTGGTCGATAGC
AATTTCGCCGTCAATCGAGTTGGTGGGACAGCCTATGTGGGATTCTCCGGCGTAAAATTG
GGCGCCGGAGTGGACCAAAGTTGCCTGAATTTAGTGCCGCTTCCGGATGAACTTTTCTCT
TCGTTGTGCTTGGATGGGGCGGATCCGGCAATGGTCCATGCCGGATTATTGCAACTTTTT
CAATCAGTTTACAGCGACAATTTATTCCGTGATCAGATGGTAGAAATAATGAACACAAGC
AAGTCAATAGTCATAACAGGACACTCAATTGGAGGAGCAATTGCATCCCTCTTAACTCTC
TGGCTTCTCTGCCGTCTGCAAACTATTTGCTCTGTCATTTGCATTACCTTTGGCTCTCCA
ATGCTTGGCAATGAGTCCTTTTCCAGAGTCATTCTTCAAAAAAGATGGGCTGGACATTTT
TGTCATGTTGTTTCACAGCATGATATTGTCCCAAGACTGTTCTTTTCCCCATCATGTTCT
TTCCAGTTTATTTCTGAGGAAAACAAGACTCAGCTTTTCCGCGTTGTGTTGGATTCTCTT
GGAGTTGTATCAAGAGGTGAATGTAAGAGTTCATTTTGTCCCTCTGGGAGCTACTTGTTC
TGCACCAACAATGGTGCAGTTTGTGTCGATAATGGGATGGTTGTCATTAAGTTGCTTTAC
TTGACCTTACTGAATGGCTCGCAAAGTTCTAGCCTTGAGGATCATCTTGGTTATGCTGAT
TTCATTCGGAAAGTTCAGTGGCAATTTATAGAGAATAGAAGCTTCATGGGAGGCAATATA
CCGGAGTCGAGCTATGAAGCAGGGATAACATTGGCACTGGAGTCACTAGGAATAGCTTCT
CATGAATTGAATTCCGAAGATGCTAAGGAAGCCCTGAAAAAGGCAAAAAAGTTGGGTCGA
ACTCGCAACCTCAACAGCGCCAACCTTGCAATTGGTTTATCCAAAATCAATCCATTCAGA
GCACAGATAGAGTGGTATAAAACATCTTGTGACAATTCTGTTGAACAAATGGGATATTAC
GATTCATTCAAGCAAAGAGGTGCCTCGAGAAGAGGCTTTAAGGTCAATATGAACAGGATC
AAACTTGGTCAGTTTTGGGATTCTTTGATTGACAAGTTGGAGGCTAATGAACTGCCGTAT
GATTTTCACAAACGTGCAAAGTGGGTAAATGCTTCTCAGTTCTACAAACTCGTTGTCGAG
CCACTTGATATTGCAGAGTACTACAGGACTGGGATGCATCTTGTGAAAGGCCACTACATG
CAGCATGGAAGGGAGAGAAGGTACAAGATTTTCGACAAGTGGTGGAACACTGAGAATGGC
ACTGATCATCCTACTGCAAGGAGCCGGTTTGCAAGTTCTACACAAGATTCATGCTTTTGG
GCTCAAGTTGAGGAGGCAAGAGACGGTCTTATTAAGGTAAGAGCTGAAAGCGATGCAAGA
AAGTTTATCAAGATGTTGGAAGATGTCACAAAGTTTGATCAATATGCTAAAAGATTGATC
GAAAATAAGGAGGTTTCGCAAGATGTTTTGGCCAAAAACTCAAGCTACACTAAGTTTATA
GAGGAATGGAATGATTTCCAGTCTCAGTTACAGCTGCTCCAACCTCAGTTTCCTTGA