Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051133
CDS Infomation

pacid=37460633 polypeptide=PGSC0003DMP400034482 locus=PGSC0003DMG402019860 ID=PGSC0003DMT400051133.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGCTCTCTCTAGTACTTCCAGAAAGACCACCATTATTTCCAAGGCAGTATAGT
CGATGTGCTGTTATAGGCAACTCAGGAGATCTTCTTCAAACAAAATTTGGTGATGAGATT
GATAGCTATGAAGCTGTTTTCAGGGAAAATGGAGCACCGATACAGAACTATACAGAATTT
GTGGGCACGAAAAGCACATTTCGCCTTCTGAATAGGGGTTCTGCTAAAGCTCTTGACAAA
GTAGCAGAGTTGTATGAAAGAGGAAAGGAGGTGTTGATAGTCAAAACAACTATACATGAT
ATCATGAACAAGATGATTCGGGAAGTTCCCATTCTCAACAAAGTATATCTCATGTTGGGT
GCATCCTTTGGTTCAGCAGCAAAAGGAACTGGACTGAAGGCTCTAGAATTTGCCCTCTCC
ATCTGTGACACTGTCGATATGTATGGTTTTACAGTTGATCCAGGCTATAAAGAATGGACC
AGGTATTTTTCAGAGTCTCGGCAAGGTCATACACCTCTGCAAGGGAGGGCATATTATCAA
ATGATGGAATGCCTAGGGCTTATAAAAATCCATTCTCCAATGCGAGCCGATCCAGATCGT
GTTGTGAAGTGGTTACCCAGCCGCAGCACAATCACTGCTGCCCGAATTGCATCAGAGAAA
TTGCTCAGGAGGGTTGGAGCTGGATCAACCAATCTTTTGGCTACATGTTCCATAATCAAG
AAGCAACAGAGAGGAAATGATGTGGACATGTCAAACCTCAGAAACGCAGCTGTTGAACAT
CAGAAATATGTAAAAGGCACTACAATGTATCCTTTGGAGCACAATCCAGGACATGGCCAA
CTCTGCACAGTTCCCAACAAGTTGATAGTCAGAAAACTGAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400034482
PEP Infomation

pacid=37460633 transcript=PGSC0003DMT400051133 locus=PGSC0003DMG402019860 ID=PGSC0003DMT400051133.v4.03 annot-version=v4.03
Sequence

MEKLSLVLPERPPLFPRQYSRCAVIGNSGDLLQTKFGDEIDSYEAVFRENGAPIQNYTEF
VGTKSTFRLLNRGSAKALDKVAELYERGKEVLIVKTTIHDIMNKMIREVPILNKVYLMLG
ASFGSAAKGTGLKALEFALSICDTVDMYGFTVDPGYKEWTRYFSESRQGHTPLQGRAYYQ
MMECLGLIKIHSPMRADPDRVVKWLPSRSTITAARIASEKLLRRVGAGSTNLLATCSIIK
KQQRGNDVDMSNLRNAAVEHQKYVKGTTMYPLEHNPGHGQLCTVPNKLIVRKLN*

Transcript Sequence

Transcript ID

PGSC0003DMT400051133
Transcript Infomation

pacid=37460633 locus=PGSC0003DMG402019860 ID=PGSC0003DMT400051133.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGCTCTCTCTAGTACTTCCAGAAAGACCACCATTATTTCCAAGGCAGTATAGT
CGATGTGCTGTTATAGGCAACTCAGGAGATCTTCTTCAAACAAAATTTGGTGATGAGATT
GATAGCTATGAAGCTGTTTTCAGGGAAAATGGAGCACCGATACAGAACTATACAGAATTT
GTGGGCACGAAAAGCACATTTCGCCTTCTGAATAGGGGTTCTGCTAAAGCTCTTGACAAA
GTAGCAGAGTTGTATGAAAGAGGAAAGGAGGTGTTGATAGTCAAAACAACTATACATGAT
ATCATGAACAAGATGATTCGGGAAGTTCCCATTCTCAACAAAGTATATCTCATGTTGGGT
GCATCCTTTGGTTCAGCAGCAAAAGGAACTGGACTGAAGGCTCTAGAATTTGCCCTCTCC
ATCTGTGACACTGTCGATATGTATGGTTTTACAGTTGATCCAGGCTATAAAGAATGGACC
AGGTATTTTTCAGAGTCTCGGCAAGGTCATACACCTCTGCAAGGGAGGGCATATTATCAA
ATGATGGAATGCCTAGGGCTTATAAAAATCCATTCTCCAATGCGAGCCGATCCAGATCGT
GTTGTGAAGTGGTTACCCAGCCGCAGCACAATCACTGCTGCCCGAATTGCATCAGAGAAA
TTGCTCAGGAGGGTTGGAGCTGGATCAACCAATCTTTTGGCTACATGTTCCATAATCAAG
AAGCAACAGAGAGGAAATGATGTGGACATGTCAAACCTCAGAAACGCAGCTGTTGAACAT
CAGAAATATGTAAAAGGCACTACAATGTATCCTTTGGAGCACAATCCAGGACATGGCCAA
CTCTGCACAGTTCCCAACAAGTTGATAGTCAGAAAACTGAACTAA