Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400051122
CDS Infomation

pacid=37462515 polypeptide=PGSC0003DMP400034474 locus=PGSC0003DMG400019856 ID=PGSC0003DMT400051122.v4.03 annot-version=v4.03
Sequence

ATGGCCATTTCCACTGGTTTCGCATTTTCTTGTCGTCCGCATTTTCCTCTGTCGCAGAGC
ATGCGAAAGGTATTTATGAGCTGTTCCGCAGCAATTGAAGCTATTGAAGAGATCGACAGT
GGCAACGAACCAGCGGAATGGAAGAGGTTCAATTCCAAGGAACTAGGAATTAGCAGTTCG
ATGATCGCAAGGCCTACTAGAGTTGTTCTTAATGGTCTCAAAAGTAAAGGATTTGAAGTT
TACCTTGTGGGGGGCTGTGTTCGGGATCTTCTTTTAAAACGAACACCAAAAGATTTTGAC
ATTATAACTACAGCTGAACTTAAAGAGGTGCGGAGAACATTTTCACATTGTGAGATAGTT
GGAAGGCGATTCCCGATCTGCCATGTGCATGTTGATGATGAAGTTGTGGAGGTTTCAAGC
TTTCACACCTCAGGAATAAGGCCTGTGAGGAACTTGGGTTTATCTTTTGAGAAGCCAGTT
GACTGTGACGAGAAGGACCACTTTCGATGGAGAAATTGTTTACGTAGAGATTTTACAATA
AACGGGTTGATGTTTGACCCTTATTCAAAACTCATCTATGATTACATGGGAGGAGTGGAT
GATATCAGGAAAGCTAAAGTACAAACAATCGGTCCTGCTAGTTTCTCATTTATAGAGGAT
TGTGCTCGAATCCTTCGTGCAATTAGAATTGCTGCCAGACTAGGATTTCGATTTGGAAGG
GAGACAGCTCTTTCTATTAAAAATTTATCATCTTCAGTCCTGAGGCTTGATAGGGGAAGG
CTCCTCATGGAAATGAATTACATGTTGGCCTATGGCTCTGCTGAGGCTTCACTGAGATTA
TTGTGGAAATTTGGTCTTCTGGATATACTTCTACCAATTCAGGCTGCATATTTCGTCCGC
CATGGTTTTAGAAGACGTGATAAGAGGTCTAACTTGCTTTTGTCTTTATTTTCCAACCTC
GATAAATTAGTGGCCCCCGATAGGCCATGCCACAGTAGCTTATGGGTCACAATTTTGGCT
TTCCATAAAGCACTCTCAGATCAACCAAGGGACCCTTTGGTGGTTGCTGCATTTGGCCTC
GGTGTTCATAATGGAGGTGATTTGTCAGAAGCTTTAAGTATAGCCAAACGGATTTCTGCA
CAACATGATGGAAGCTTTCATGAGTTGGAGTCACGGGATCTGAACTTGGCAGCTTTAAAA
GAGGAAGTTGTGGAACTGGCAACTTCAGTTCAAAGGGCACTGACTAATATGACAGATGAG
TATAGTGTCTCACGAGCAATGGCCAACTACCCTAAAGCACCGTACTCAGACCTAGTATTT
ATTCCATTAGCACTGTATTTAAAGGCGTGCAAGGTTTGCCAATGCGTTAGAATGGGAAGG
GAGAAGGGATTTGTAGCCAAGCAAGGTAGCAAGATAGACTATGAGTTGTTAGCTTCAGGT
AGCCTACAGGAAGTCCGACATGTCTTTGCCAGGATAGTCTTCGATACCATATATCCATTA
AATACTGGCGACGATGATACCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400034474
PEP Infomation

pacid=37462515 transcript=PGSC0003DMT400051122 locus=PGSC0003DMG400019856 ID=PGSC0003DMT400051122.v4.03 annot-version=v4.03
Sequence

MAISTGFAFSCRPHFPLSQSMRKVFMSCSAAIEAIEEIDSGNEPAEWKRFNSKELGISSS
MIARPTRVVLNGLKSKGFEVYLVGGCVRDLLLKRTPKDFDIITTAELKEVRRTFSHCEIV
GRRFPICHVHVDDEVVEVSSFHTSGIRPVRNLGLSFEKPVDCDEKDHFRWRNCLRRDFTI
NGLMFDPYSKLIYDYMGGVDDIRKAKVQTIGPASFSFIEDCARILRAIRIAARLGFRFGR
ETALSIKNLSSSVLRLDRGRLLMEMNYMLAYGSAEASLRLLWKFGLLDILLPIQAAYFVR
HGFRRRDKRSNLLLSLFSNLDKLVAPDRPCHSSLWVTILAFHKALSDQPRDPLVVAAFGL
GVHNGGDLSEALSIAKRISAQHDGSFHELESRDLNLAALKEEVVELATSVQRALTNMTDE
YSVSRAMANYPKAPYSDLVFIPLALYLKACKVCQCVRMGREKGFVAKQGSKIDYELLASG
SLQEVRHVFARIVFDTIYPLNTGDDDT*

Transcript Sequence

Transcript ID

PGSC0003DMT400051122
Transcript Infomation

pacid=37462515 locus=PGSC0003DMG400019856 ID=PGSC0003DMT400051122.v4.03 annot-version=v4.03
Sequence

ATGGCCATTTCCACTGGTTTCGCATTTTCTTGTCGTCCGCATTTTCCTCTGTCGCAGAGC
ATGCGAAAGGTATTTATGAGCTGTTCCGCAGCAATTGAAGCTATTGAAGAGATCGACAGT
GGCAACGAACCAGCGGAATGGAAGAGGTTCAATTCCAAGGAACTAGGAATTAGCAGTTCG
ATGATCGCAAGGCCTACTAGAGTTGTTCTTAATGGTCTCAAAAGTAAAGGATTTGAAGTT
TACCTTGTGGGGGGCTGTGTTCGGGATCTTCTTTTAAAACGAACACCAAAAGATTTTGAC
ATTATAACTACAGCTGAACTTAAAGAGGTGCGGAGAACATTTTCACATTGTGAGATAGTT
GGAAGGCGATTCCCGATCTGCCATGTGCATGTTGATGATGAAGTTGTGGAGGTTTCAAGC
TTTCACACCTCAGGAATAAGGCCTGTGAGGAACTTGGGTTTATCTTTTGAGAAGCCAGTT
GACTGTGACGAGAAGGACCACTTTCGATGGAGAAATTGTTTACGTAGAGATTTTACAATA
AACGGGTTGATGTTTGACCCTTATTCAAAACTCATCTATGATTACATGGGAGGAGTGGAT
GATATCAGGAAAGCTAAAGTACAAACAATCGGTCCTGCTAGTTTCTCATTTATAGAGGAT
TGTGCTCGAATCCTTCGTGCAATTAGAATTGCTGCCAGACTAGGATTTCGATTTGGAAGG
GAGACAGCTCTTTCTATTAAAAATTTATCATCTTCAGTCCTGAGGCTTGATAGGGGAAGG
CTCCTCATGGAAATGAATTACATGTTGGCCTATGGCTCTGCTGAGGCTTCACTGAGATTA
TTGTGGAAATTTGGTCTTCTGGATATACTTCTACCAATTCAGGCTGCATATTTCGTCCGC
CATGGTTTTAGAAGACGTGATAAGAGGTCTAACTTGCTTTTGTCTTTATTTTCCAACCTC
GATAAATTAGTGGCCCCCGATAGGCCATGCCACAGTAGCTTATGGGTCACAATTTTGGCT
TTCCATAAAGCACTCTCAGATCAACCAAGGGACCCTTTGGTGGTTGCTGCATTTGGCCTC
GGTGTTCATAATGGAGGTGATTTGTCAGAAGCTTTAAGTATAGCCAAACGGATTTCTGCA
CAACATGATGGAAGCTTTCATGAGTTGGAGTCACGGGATCTGAACTTGGCAGCTTTAAAA
GAGGAAGTTGTGGAACTGGCAACTTCAGTTCAAAGGGCACTGACTAATATGACAGATGAG
TATAGTGTCTCACGAGCAATGGCCAACTACCCTAAAGCACCGTACTCAGACCTAGTATTT
ATTCCATTAGCACTGTATTTAAAGGCGTGCAAGGTTTGCCAATGCGTTAGAATGGGAAGG
GAGAAGGGATTTGTAGCCAAGCAAGGTAGCAAGATAGACTATGAGTTGTTAGCTTCAGGT
AGCCTACAGGAAGTCCGACATGTCTTTGCCAGGATAGTCTTCGATACCATATATCCATTA
AATACTGGCGACGATGATACCTAA