Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050945
CDS Infomation

pacid=37453487 polypeptide=PGSC0003DMP400034378 locus=PGSC0003DMG400019783 ID=PGSC0003DMT400050945.v4.03 annot-version=v4.03
Sequence

ATGTCTTCAGATGTCTTCAAGCAATTCACCAACCAAGATGGGAAATTCAAGGAAACGCTT
ACTAATGATGTCCAAGGATTATTGAGTTTGTATGAGGCATCACATCTGAGAGTGCGTGAT
GAGGAGATTCTTGAAGAAGCTCTTACCTTTACCACTACTCATCTCGAGTCTATTGTCTCT
AACTTGAGCAATAACTCTCTTAAGGTTGAAGTTACTGAAGCCTTAAAACAGCCTATTCGC
AAGACTTTACCAAGGGTGGGAGCAAGGAAATACATATCCATTTACGAAAACAATGATGCA
CACAACCATTTGCTTTTGAAATTTGCTAAATTGGATTTCAACCTGCTGCAAAAGTTCCAC
CAAAGAGAACTTAGTGAGCTTACAAGGTGGTGGAAAGATTTGAATTTTGCAAATAAATAT
TCATATGCAAGAGACAGACTGGTTGAGTGTTACTTTTGGATATTAGGAGTGTATTTTGAG
CCAAAGTATAGTCGTGCTAGAAAAATGCTAACAAAAGTACTCAAGATGACCTCAATTATT
GATGACACTTTTGATGCCTATGCAACCTATGACGAACTTGTGCCCTTCAATGATGTCATC
CAGAGATGGGACATTAGTGTGATTGATTCACTACCGCCATTTATGAGACCTGCTTATCAA
GCCCTTCAAGACATTTACAATGAAATGGAACAATTATTGACAAAAGAAGGTAACTCGGAC
CGTGTATACTATGCAAAATATGAGATGAAAAAGTTGGTGAGAGCCTATTTTAAGGAAGCG
CAATGGTTGGATGCTGGCTATACTCCAAAATATGAGGAGCATTTGGAGAATGCACTAGTA
AGTTGTGGGTATATGATGGCAGCAACTACTTCCTTGATCGACATGGACGAATCTATAAGC
CAAGAGACTTTTGAATGGATGATAAATGAACCTTTGATAGTTCGTGCAGCATCGATAATT
AACAGACGAATGGATGATATGATTGGACATGAAAATGAACAACAAAGAGAACATGTAGCT
TCAACTATTGAATGCTACATGAAAGAATATGGAGCGTCAAAGCAAGAGACATATACTAAG
TTTCACAAAGAAGTAGTCAATGGATGGAAGGACATAAACAAAGAACTCATTCGTCCAACT
GAAGTACCAATGTTTGTTCGTGAACGAGCTTTATATTTCGCATGTGTGATGGACACTTTA
TATAAAGAAGAAGATGGATACACAAACTCCAAAGGCAAACTTAAAAACATGATTAACTTG
TTACTGGTTGAACCTGTCAAGATAGATTTTGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400034378
PEP Infomation

pacid=37453487 transcript=PGSC0003DMT400050945 locus=PGSC0003DMG400019783 ID=PGSC0003DMT400050945.v4.03 annot-version=v4.03
Sequence

MSSDVFKQFTNQDGKFKETLTNDVQGLLSLYEASHLRVRDEEILEEALTFTTTHLESIVS
NLSNNSLKVEVTEALKQPIRKTLPRVGARKYISIYENNDAHNHLLLKFAKLDFNLLQKFH
QRELSELTRWWKDLNFANKYSYARDRLVECYFWILGVYFEPKYSRARKMLTKVLKMTSII
DDTFDAYATYDELVPFNDVIQRWDISVIDSLPPFMRPAYQALQDIYNEMEQLLTKEGNSD
RVYYAKYEMKKLVRAYFKEAQWLDAGYTPKYEEHLENALVSCGYMMAATTSLIDMDESIS
QETFEWMINEPLIVRAASIINRRMDDMIGHENEQQREHVASTIECYMKEYGASKQETYTK
FHKEVVNGWKDINKELIRPTEVPMFVRERALYFACVMDTLYKEEDGYTNSKGKLKNMINL
LLVEPVKIDFE*

Transcript Sequence

Transcript ID

PGSC0003DMT400050945
Transcript Infomation

pacid=37453487 locus=PGSC0003DMG400019783 ID=PGSC0003DMT400050945.v4.03 annot-version=v4.03
Sequence

ATGTCTTCAGATGTCTTCAAGCAATTCACCAACCAAGATGGGAAATTCAAGGAAACGCTT
ACTAATGATGTCCAAGGATTATTGAGTTTGTATGAGGCATCACATCTGAGAGTGCGTGAT
GAGGAGATTCTTGAAGAAGCTCTTACCTTTACCACTACTCATCTCGAGTCTATTGTCTCT
AACTTGAGCAATAACTCTCTTAAGGTTGAAGTTACTGAAGCCTTAAAACAGCCTATTCGC
AAGACTTTACCAAGGGTGGGAGCAAGGAAATACATATCCATTTACGAAAACAATGATGCA
CACAACCATTTGCTTTTGAAATTTGCTAAATTGGATTTCAACCTGCTGCAAAAGTTCCAC
CAAAGAGAACTTAGTGAGCTTACAAGGTGGTGGAAAGATTTGAATTTTGCAAATAAATAT
TCATATGCAAGAGACAGACTGGTTGAGTGTTACTTTTGGATATTAGGAGTGTATTTTGAG
CCAAAGTATAGTCGTGCTAGAAAAATGCTAACAAAAGTACTCAAGATGACCTCAATTATT
GATGACACTTTTGATGCCTATGCAACCTATGACGAACTTGTGCCCTTCAATGATGTCATC
CAGAGATGGGACATTAGTGTGATTGATTCACTACCGCCATTTATGAGACCTGCTTATCAA
GCCCTTCAAGACATTTACAATGAAATGGAACAATTATTGACAAAAGAAGGTAACTCGGAC
CGTGTATACTATGCAAAATATGAGATGAAAAAGTTGGTGAGAGCCTATTTTAAGGAAGCG
CAATGGTTGGATGCTGGCTATACTCCAAAATATGAGGAGCATTTGGAGAATGCACTAGTA
AGTTGTGGGTATATGATGGCAGCAACTACTTCCTTGATCGACATGGACGAATCTATAAGC
CAAGAGACTTTTGAATGGATGATAAATGAACCTTTGATAGTTCGTGCAGCATCGATAATT
AACAGACGAATGGATGATATGATTGGACATGAAAATGAACAACAAAGAGAACATGTAGCT
TCAACTATTGAATGCTACATGAAAGAATATGGAGCGTCAAAGCAAGAGACATATACTAAG
TTTCACAAAGAAGTAGTCAATGGATGGAAGGACATAAACAAAGAACTCATTCGTCCAACT
GAAGTACCAATGTTTGTTCGTGAACGAGCTTTATATTTCGCATGTGTGATGGACACTTTA
TATAAAGAAGAAGATGGATACACAAACTCCAAAGGCAAACTTAAAAACATGATTAACTTG
TTACTGGTTGAACCTGTCAAGATAGATTTTGAGTAA