Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050839
CDS Infomation

pacid=37472168 polypeptide=PGSC0003DMP400034319 locus=PGSC0003DMG400019747 ID=PGSC0003DMT400050839.v4.03 annot-version=v4.03
Sequence

ATGTTTGGATTCAGTATAAGAACAGGTAGGCAAAATGCCTCAGGTTCACCAAGTTCAAAA
ACAGGATCTCCATCATCTGTTGGTTCACCAAAAACAGCAGGAAGTACAGGTTCACCAAAG
ACAGAAGTTGGTGAAATTGACACAAGAGCACCTTTTCAATCTGTTAGAGCTGCTGTTAGT
TTGTTTGGTGATACTGGTTCTTCACCTCAGGCTAAACCAACAATTAAAAGATCAAAAACC
ATTGAAGAGAGGGTGTTAGAGAAGGAAAGTAGGCTTCATTTGGCCCTAAGAGAACTAGAT
GGCTTCAAAGAACAGATAAGAAGTACAGAGACAACAAAGACTCATGCTCTTCGAGATCTC
GAAAAGGCTAAAAGAACACTCCAAGAACTCACAGGAAAGCTCGAGACACTATGCGAAACG
AAGCAAGCAGCTATTGAGGCAACAGAGACAGCAAAGGCCCGAGCCATCGAGCTCGAAGAA
CAGAAATCAAATAAACCTCCAGTAGGCACTGATGCTTGGAAACAGAATGTTGAAGCTGAA
AGAGAACAATATCGAACATCTTCTGGTGAACTAAATTCCGCAAAACAAGAGCTTACAAAC
CTCCGTCAGGACTTTGATGCAGCCCTGACTGCTAAACTGGCCGCGTTTCAAGAAGCTGCA
GATGCACAGCATAACGCGGCCATCAATAGAGAGAGGCTAGGTAAGCTCTCGAAAGAAGTC
ACTACATTACGCGAAACATTAGGACAAGTAAAAGTTGCATCTCTCCAAGCACAAGACGAG
CACGAAAAGATTATCCAAGATAAAGAAGTTCACTTACATTCACTCAAAACAGCTAAAGAA
GAAGCTGAAGAGAAAATCAGGACCCTCAAAGAGGACCCTGACTCTCAACTAGTAACAGAA
AACCTCGTTGAGAAACTCGAGGTAACCAACGAGGCAATCCATGTCTTACAAGAACAACTC
AATAAAGTCCAAGCCCTGGATTTAGACGCATATAACAAAGCAAATGAAGAGCTCAATGCT
ACAAAGAACATGTTGAAAGAGATAGTCGCGGAGGAAAGTTCCCTCCGTGCCATAGTTGAA
TCCCTTAAACAAGAAGCAGAATGTGTAAAAGGCGAACTCAATGAGCTTAAAAAGAAAGCA
GAGGAAACAGAGTCTCTAGTCGAAAACTTAAAATTAGAGCTCGAAAACAGCAAGAAAGAT
CTCGAAACAAGCATTTCAGCTAAAACACAAGCTGAAGGAGATTCAAATGATTTACCTTCA
AGAATCCAACAGTTAACTTCCGAGGCTAATCAATACACAAAAGAAGCAAATGAGATGAAG
AAAAACACGGAGTTATTCAAACAAGACGCGCAATCAGCACATGAAACAACTAAAGAAACA
GAGGAAAAGCTAAAAATCGCGCTAAAAGAGGCAGAAGAAGCAAAAGCAGCAGAGAAAGTT
GCAGATGAAAAGATACACAATCAATCAAGAAACAACAAAACAGACAATTCCACTGATGAT
AACAACGACGAAAAACATTCATCATCAGAATCATCTAATGGGAAGATAAGACTATCAGTC
GAGGAATTTGAGGCATTAAAACGAAAAGTAGAGGGAATCAAGAATGATGCTGACATAAAA
GTTGCAACTGTGATGGCACAAGTTGAAACCATCAATGCAAATGAAAAACAAGCAAACGAA
AAACTCGAGGGGTTGTTAAAGGAGAAAGAAGATATCAAAACCGCGACACAAGAAGCATTG
AAAACAACAGAAATGGCAGAAGCAGCAAAATTGGTAGTTGAAGGAGAATTGCAGAAATGG
AGAATAAAGGAACAAGAAGAAGAAGAAATTGGAGAATCATCTAATGGAAATGTTGAAGAG
ACATAG

Peptide Sequence

PEP ID

PGSC0003DMP400034319
PEP Infomation

pacid=37472168 transcript=PGSC0003DMT400050839 locus=PGSC0003DMG400019747 ID=PGSC0003DMT400050839.v4.03 annot-version=v4.03
Sequence

MFGFSIRTGRQNASGSPSSKTGSPSSVGSPKTAGSTGSPKTEVGEIDTRAPFQSVRAAVS
LFGDTGSSPQAKPTIKRSKTIEERVLEKESRLHLALRELDGFKEQIRSTETTKTHALRDL
EKAKRTLQELTGKLETLCETKQAAIEATETAKARAIELEEQKSNKPPVGTDAWKQNVEAE
REQYRTSSGELNSAKQELTNLRQDFDAALTAKLAAFQEAADAQHNAAINRERLGKLSKEV
TTLRETLGQVKVASLQAQDEHEKIIQDKEVHLHSLKTAKEEAEEKIRTLKEDPDSQLVTE
NLVEKLEVTNEAIHVLQEQLNKVQALDLDAYNKANEELNATKNMLKEIVAEESSLRAIVE
SLKQEAECVKGELNELKKKAEETESLVENLKLELENSKKDLETSISAKTQAEGDSNDLPS
RIQQLTSEANQYTKEANEMKKNTELFKQDAQSAHETTKETEEKLKIALKEAEEAKAAEKV
ADEKIHNQSRNNKTDNSTDDNNDEKHSSSESSNGKIRLSVEEFEALKRKVEGIKNDADIK
VATVMAQVETINANEKQANEKLEGLLKEKEDIKTATQEALKTTEMAEAAKLVVEGELQKW
RIKEQEEEEIGESSNGNVEET*

Transcript Sequence

Transcript ID

PGSC0003DMT400050839
Transcript Infomation

pacid=37472168 locus=PGSC0003DMG400019747 ID=PGSC0003DMT400050839.v4.03 annot-version=v4.03
Sequence

ATGTTTGGATTCAGTATAAGAACAGGTAGGCAAAATGCCTCAGGTTCACCAAGTTCAAAA
ACAGGATCTCCATCATCTGTTGGTTCACCAAAAACAGCAGGAAGTACAGGTTCACCAAAG
ACAGAAGTTGGTGAAATTGACACAAGAGCACCTTTTCAATCTGTTAGAGCTGCTGTTAGT
TTGTTTGGTGATACTGGTTCTTCACCTCAGGCTAAACCAACAATTAAAAGATCAAAAACC
ATTGAAGAGAGGGTGTTAGAGAAGGAAAGTAGGCTTCATTTGGCCCTAAGAGAACTAGAT
GGCTTCAAAGAACAGATAAGAAGTACAGAGACAACAAAGACTCATGCTCTTCGAGATCTC
GAAAAGGCTAAAAGAACACTCCAAGAACTCACAGGAAAGCTCGAGACACTATGCGAAACG
AAGCAAGCAGCTATTGAGGCAACAGAGACAGCAAAGGCCCGAGCCATCGAGCTCGAAGAA
CAGAAATCAAATAAACCTCCAGTAGGCACTGATGCTTGGAAACAGAATGTTGAAGCTGAA
AGAGAACAATATCGAACATCTTCTGGTGAACTAAATTCCGCAAAACAAGAGCTTACAAAC
CTCCGTCAGGACTTTGATGCAGCCCTGACTGCTAAACTGGCCGCGTTTCAAGAAGCTGCA
GATGCACAGCATAACGCGGCCATCAATAGAGAGAGGCTAGGTAAGCTCTCGAAAGAAGTC
ACTACATTACGCGAAACATTAGGACAAGTAAAAGTTGCATCTCTCCAAGCACAAGACGAG
CACGAAAAGATTATCCAAGATAAAGAAGTTCACTTACATTCACTCAAAACAGCTAAAGAA
GAAGCTGAAGAGAAAATCAGGACCCTCAAAGAGGACCCTGACTCTCAACTAGTAACAGAA
AACCTCGTTGAGAAACTCGAGGTAACCAACGAGGCAATCCATGTCTTACAAGAACAACTC
AATAAAGTCCAAGCCCTGGATTTAGACGCATATAACAAAGCAAATGAAGAGCTCAATGCT
ACAAAGAACATGTTGAAAGAGATAGTCGCGGAGGAAAGTTCCCTCCGTGCCATAGTTGAA
TCCCTTAAACAAGAAGCAGAATGTGTAAAAGGCGAACTCAATGAGCTTAAAAAGAAAGCA
GAGGAAACAGAGTCTCTAGTCGAAAACTTAAAATTAGAGCTCGAAAACAGCAAGAAAGAT
CTCGAAACAAGCATTTCAGCTAAAACACAAGCTGAAGGAGATTCAAATGATTTACCTTCA
AGAATCCAACAGTTAACTTCCGAGGCTAATCAATACACAAAAGAAGCAAATGAGATGAAG
AAAAACACGGAGTTATTCAAACAAGACGCGCAATCAGCACATGAAACAACTAAAGAAACA
GAGGAAAAGCTAAAAATCGCGCTAAAAGAGGCAGAAGAAGCAAAAGCAGCAGAGAAAGTT
GCAGATGAAAAGATACACAATCAATCAAGAAACAACAAAACAGACAATTCCACTGATGAT
AACAACGACGAAAAACATTCATCATCAGAATCATCTAATGGGAAGATAAGACTATCAGTC
GAGGAATTTGAGGCATTAAAACGAAAAGTAGAGGGAATCAAGAATGATGCTGACATAAAA
GTTGCAACTGTGATGGCACAAGTTGAAACCATCAATGCAAATGAAAAACAAGCAAACGAA
AAACTCGAGGGGTTGTTAAAGGAGAAAGAAGATATCAAAACCGCGACACAAGAAGCATTG
AAAACAACAGAAATGGCAGAAGCAGCAAAATTGGTAGTTGAAGGAGAATTGCAGAAATGG
AGAATAAAGGAACAAGAAGAAGAAGAAATTGGAGAATCATCTAATGGAAATGTTGAAGAG
ACATAG