Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050790
CDS Infomation

pacid=37425817 polypeptide=PGSC0003DMP400034284 locus=PGSC0003DMG400019727 ID=PGSC0003DMT400050790.v4.03 annot-version=v4.03
Sequence

ATGGGGAGTTGTTTGAGTAAGAAGAACACTTCTTGTTCTTCTTCTAAGTCTACTTCTACT
TCTACTGTTTCAAATACAAATCAAGAAATTGTTAAAAATAGTACCCAAGTGGAGAACAAG
AAAGAAGTAGAAGGAGAAAGTGTGAAAAAAGAGATCTTTGTTATTAAACACAGAAAAAGC
CATGAAGTGGATAGGAAGACTGAAGAAGAAAAGGGTATGGTTAAAAAAGGAATTGAAGTA
GTTGAGACTGTGAAAAATGGTATTAGTAATAGCAATGGTGGGTTAGGGTTAGGCAAAGAG
AATGGTATTGTTGTATCGGCTCCTGTGAGGACTTCAAGTTGTACTAAAGAAGAGGTTGAT
GCTATTTTGATACAATGTGGGAGGCTTAGCAGGAGTTCATCTACTGGAAAGACAGGGGTT
TTGGGTTCTAGTGGATCTATTGATACTCCTCAAAGGAGTAGAAAGTACTCTGGTTCCAAG
AGGAGTTTTGATTTTGAGAATGACAATGGTAATGAGGGGATGCAAGAAAATGTAGTGGAT
TGTGAGGATGATGGGGTTGTTGGGAATGGAGTTCGTCGCCATAGGCAACGCCAGCGTCAG
CCTAGAACCCCTAATTCTTTGTCTCAGGGACGGAGGAGAACCCCGAGTAGGGAGAGAGAC
CAGGCGCAACAGCAGCAGCGGTCGGGGAGTAGTAGAGAAAGAGGCAGCAGTGGAGGAGGG
GGTAGAAGGGTGAGCAGATCTCCTGGTAGAAGATCTGACTCACCAATTACTACTACCACA
AATGGTGGTAATGTGGCTTCTGCTAATGCTAATGGAAATAATGGTGGTAGGCCAGGGAAG
ATGGTATCTGTACCTGCTACTGTTTCATCTATGGTGATGGATAAGAGCATTGATGCTGGT
GGAACTGACAATATATCTGCTGCTGCTGTTAAGAGGATTCAAGTGAAGAGAAATGCAGGT
GGCGACGGACCAAGAACTGCTGCATCTCCGCGTGCTCGGTCACCAGCAAGGGTGAATGCA
AAGGTGTTGAATGAGAGAGATAACAATGCTCATTCCAACCAAAATCAACAGCAGCCCATG
TCCCTTAGCCGTAGCAATTCAAGGAAACACGAGCAATCTCCCTACAGAAGAAATCCTCTC
AGTGAGATTGACACCAATGTTGTCTTGGAGCAGATGCCCGCGCCAGGACTGAAGGTCCCT
TCCCAGAAGTTGAATGCAGAAACTGTGAGCAATGGCAAAGTCAAGGAGCAGCAGCATAAT
GTTGCAATGAATGTGATTGTTTCAGGACCCGAAAGCCATAAACCCCAGAGAAGCAGGTCT
TTAAGGCTATCTAGGGACCTAGATATCAATCCTGAAGCTCTCTCAAATCCTCCTCAATCA
TATACTGCACTGTTGCTTGAGGACATCCAAAACTTCCATCAAAAGACTAATACCACCACC
CCTGCATTTTCACTACCACCTTGTGTAACAAAAGCTTGCTCAATTGTTGATGCAGTTGCT
GACCTGAACTCAACCACTAGCTCCAATCTGTCCAGTGCTTTCTCCGATGACAGGAGAAGA
AACCCCACATCTGAGCAATTTAGTCAGAATGATAATGCTTCTTTTGATCCTCTAGGGAAG
AAGAAGTTAGGGATCAAGGATCCCTTCATGGAGTCTGAAGTTGCTGTGAGTGGTGACCTA
ATGGAGCCAAGCATACAGAAGTATGTAACTTTCAGAAGGGGAACTGATATGGAAGAACAA
GAATCCTCAGGAAGCAACAGTGTTGTTGGTGGTCAGCAAAATTGGCTTTCCCCTTCCTCA
TGGGAACCAAATTCGGCTGATTCAACTGACTGTTGGCCTTCTTCAAAATCCTACAGTAGA
GATGATAACAAGAGTCCTCTAGGCTTTCAAAGGCATGCAATATCTGAGATTGGCCATGAC
ATGGAAGAAGGAAAAAGAAGAGTGAATGTGAAGAGGAGGGAATCTGACAACCAGCAAACA
GGAATAGGCCGTGGCAGGGTTGGACTTAGAGGAGGGATTTCTATGCCTGCTTCTACTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400034284
PEP Infomation

pacid=37425817 transcript=PGSC0003DMT400050790 locus=PGSC0003DMG400019727 ID=PGSC0003DMT400050790.v4.03 annot-version=v4.03
Sequence

MGSCLSKKNTSCSSSKSTSTSTVSNTNQEIVKNSTQVENKKEVEGESVKKEIFVIKHRKS
HEVDRKTEEEKGMVKKGIEVVETVKNGISNSNGGLGLGKENGIVVSAPVRTSSCTKEEVD
AILIQCGRLSRSSSTGKTGVLGSSGSIDTPQRSRKYSGSKRSFDFENDNGNEGMQENVVD
CEDDGVVGNGVRRHRQRQRQPRTPNSLSQGRRRTPSRERDQAQQQQRSGSSRERGSSGGG
GRRVSRSPGRRSDSPITTTTNGGNVASANANGNNGGRPGKMVSVPATVSSMVMDKSIDAG
GTDNISAAAVKRIQVKRNAGGDGPRTAASPRARSPARVNAKVLNERDNNAHSNQNQQQPM
SLSRSNSRKHEQSPYRRNPLSEIDTNVVLEQMPAPGLKVPSQKLNAETVSNGKVKEQQHN
VAMNVIVSGPESHKPQRSRSLRLSRDLDINPEALSNPPQSYTALLLEDIQNFHQKTNTTT
PAFSLPPCVTKACSIVDAVADLNSTTSSNLSSAFSDDRRRNPTSEQFSQNDNASFDPLGK
KKLGIKDPFMESEVAVSGDLMEPSIQKYVTFRRGTDMEEQESSGSNSVVGGQQNWLSPSS
WEPNSADSTDCWPSSKSYSRDDNKSPLGFQRHAISEIGHDMEEGKRRVNVKRRESDNQQT
GIGRGRVGLRGGISMPAST*

Transcript Sequence

Transcript ID

PGSC0003DMT400050790
Transcript Infomation

pacid=37425817 locus=PGSC0003DMG400019727 ID=PGSC0003DMT400050790.v4.03 annot-version=v4.03
Sequence

ATGGGGAGTTGTTTGAGTAAGAAGAACACTTCTTGTTCTTCTTCTAAGTCTACTTCTACT
TCTACTGTTTCAAATACAAATCAAGAAATTGTTAAAAATAGTACCCAAGTGGAGAACAAG
AAAGAAGTAGAAGGAGAAAGTGTGAAAAAAGAGATCTTTGTTATTAAACACAGAAAAAGC
CATGAAGTGGATAGGAAGACTGAAGAAGAAAAGGGTATGGTTAAAAAAGGAATTGAAGTA
GTTGAGACTGTGAAAAATGGTATTAGTAATAGCAATGGTGGGTTAGGGTTAGGCAAAGAG
AATGGTATTGTTGTATCGGCTCCTGTGAGGACTTCAAGTTGTACTAAAGAAGAGGTTGAT
GCTATTTTGATACAATGTGGGAGGCTTAGCAGGAGTTCATCTACTGGAAAGACAGGGGTT
TTGGGTTCTAGTGGATCTATTGATACTCCTCAAAGGAGTAGAAAGTACTCTGGTTCCAAG
AGGAGTTTTGATTTTGAGAATGACAATGGTAATGAGGGGATGCAAGAAAATGTAGTGGAT
TGTGAGGATGATGGGGTTGTTGGGAATGGAGTTCGTCGCCATAGGCAACGCCAGCGTCAG
CCTAGAACCCCTAATTCTTTGTCTCAGGGACGGAGGAGAACCCCGAGTAGGGAGAGAGAC
CAGGCGCAACAGCAGCAGCGGTCGGGGAGTAGTAGAGAAAGAGGCAGCAGTGGAGGAGGG
GGTAGAAGGGTGAGCAGATCTCCTGGTAGAAGATCTGACTCACCAATTACTACTACCACA
AATGGTGGTAATGTGGCTTCTGCTAATGCTAATGGAAATAATGGTGGTAGGCCAGGGAAG
ATGGTATCTGTACCTGCTACTGTTTCATCTATGGTGATGGATAAGAGCATTGATGCTGGT
GGAACTGACAATATATCTGCTGCTGCTGTTAAGAGGATTCAAGTGAAGAGAAATGCAGGT
GGCGACGGACCAAGAACTGCTGCATCTCCGCGTGCTCGGTCACCAGCAAGGGTGAATGCA
AAGGTGTTGAATGAGAGAGATAACAATGCTCATTCCAACCAAAATCAACAGCAGCCCATG
TCCCTTAGCCGTAGCAATTCAAGGAAACACGAGCAATCTCCCTACAGAAGAAATCCTCTC
AGTGAGATTGACACCAATGTTGTCTTGGAGCAGATGCCCGCGCCAGGACTGAAGGTCCCT
TCCCAGAAGTTGAATGCAGAAACTGTGAGCAATGGCAAAGTCAAGGAGCAGCAGCATAAT
GTTGCAATGAATGTGATTGTTTCAGGACCCGAAAGCCATAAACCCCAGAGAAGCAGGTCT
TTAAGGCTATCTAGGGACCTAGATATCAATCCTGAAGCTCTCTCAAATCCTCCTCAATCA
TATACTGCACTGTTGCTTGAGGACATCCAAAACTTCCATCAAAAGACTAATACCACCACC
CCTGCATTTTCACTACCACCTTGTGTAACAAAAGCTTGCTCAATTGTTGATGCAGTTGCT
GACCTGAACTCAACCACTAGCTCCAATCTGTCCAGTGCTTTCTCCGATGACAGGAGAAGA
AACCCCACATCTGAGCAATTTAGTCAGAATGATAATGCTTCTTTTGATCCTCTAGGGAAG
AAGAAGTTAGGGATCAAGGATCCCTTCATGGAGTCTGAAGTTGCTGTGAGTGGTGACCTA
ATGGAGCCAAGCATACAGAAGTATGTAACTTTCAGAAGGGGAACTGATATGGAAGAACAA
GAATCCTCAGGAAGCAACAGTGTTGTTGGTGGTCAGCAAAATTGGCTTTCCCCTTCCTCA
TGGGAACCAAATTCGGCTGATTCAACTGACTGTTGGCCTTCTTCAAAATCCTACAGTAGA
GATGATAACAAGAGTCCTCTAGGCTTTCAAAGGCATGCAATATCTGAGATTGGCCATGAC
ATGGAAGAAGGAAAAAGAAGAGTGAATGTGAAGAGGAGGGAATCTGACAACCAGCAAACA
GGAATAGGCCGTGGCAGGGTTGGACTTAGAGGAGGGATTTCTATGCCTGCTTCTACTTAA