Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050716
CDS Infomation

pacid=37472478 polypeptide=PGSC0003DMP400034225 locus=PGSC0003DMG400019692 ID=PGSC0003DMT400050716.v4.03 annot-version=v4.03
Sequence

ATGTATGTGGTGAAGAGAGATGGGCGTCAGGAAACTGTTCACTTTGATAAGATTACTGCT
AGGCTTAAGAAATTGAGTTATGGGTTAAGTACTGATCATTGTGATCCGGTTCTTGTTTCT
CAGAAGGTTTGTGCTGGTGTTTACAAGGGTGTTACTACTAGTCAGCTTGATGAATTGGCT
GCGGAAACTGCTGCTGCTATGACTGCTAATCATCCTGATTATGCCTGTCTGGCTGCAAGG
ATTGCTGTGTCCAACCTGCACAAGAACACCAAGAAATCATTTTCCGAGACGATTAAGGAC
ATGTACTACCATGTTAGTGAGAGATCTGGATTGAAGGCACCACTGGTTTCTGATGAAGTT
TATGAGATAATCATGAAGAATGCTGCTCGTCTGGACAGTGAGATCATATACGACAGAGAC
TTTGACTATGATTACTTTGGTTTCAAAACCCTTGAAAGGTCTTACCTCTTAAAGATTCAG
GGAAAGATTGTAGAAAGGCCACAACACATGCTGATGAGAGTATCTGTTGGAATCCACAAA
GAGGATATTGAATCTGTCATCAAGACATATCAGTTGATGTCTCAACGCTGGTTCACTCAT
GCATCTCCAACACTATTTAATGCTGGCACTCCAAGGCCTCAATTAAGTAGCTGCTTCCTG
ATATGCATGAAAGATGATAGTATTGAGGGCATATATGATACTCTTAAGGAATGTGCTGTT
ATTAGCAAATCAGCTGGGGGAATTGGCGTATCTGTGCACAACATACGTGCTACTGGGAGT
TATATTCGTGGAACAAACGGAACATCAAATGGGATTGTTCCTATGCTGCGTGTGTTTAAT
GATACTGCCAGATATGTTGATCAAGGGGGTGGCAAAAGAAAGGGTGCTTTTGCTGTCTAC
CTTGAGCCTTGGCATGCTGATATATTTGAATTTCTGGATTTAAGGAAGAACCATGGGAAG
GAAGAGAATCGGGCACGGGATCTTTTCTATGCTCTTTGGGTACCAGATCTTTTTATGCAA
AGAGTCCAAAGCAATGGGGTATGGTCTTTGTTTTGTCCATGTGAGGCTCCTGGATTGGCA
GATTGCTGGGGTGAAGATTTTGAGAAGCTATACACAAAATATGAAAAAGAGGGAAAGGCA
AAGAAGGTCGTTCAGGCACAAAATCTCTGGTTTGAGATCTTAAAGTCCCAGATAGAAACT
GGGACCCCTTACATGTTGTACAAGGATTCTTGCAATAGAAAAAGCAACCAGCAGAATCTT
GGCACTATCAAGTCTTCTAACTTGTGTACAGAGATTATTGAGTACACAAGTCCAACTGAA
ACTGCTGTTTGCAATCTTGCTTCAATTGCTCTACCAAGATATGTTAGAGAGAAGGGGGTC
CCAGGTGAATCACAACCATCTAAGCTTGTGGGGAGTAGAGGTTCTAAAAATCGATACTTT
GATTTTGACAAATTGGCAGAGGTTACTGCATTAGTCACTTCAAACCTGAACAAAATTATT
GATGTCAATTACTACCCTGTTGAAACTGCAAAAAGGTCTAACTTACGACATAGGCCTATT
GGACTTGGAGTCCAGGGACTTGCAGACACATTCATTTTGCTTGGCATGGCATTTGATTCC
CAGGAGGCTCAGCAGCTAAACAAGGACATATTTGAGACAATATACTACCATGCATTAAAA
GCTTCTTCTGAATTAGCTGCCAAGGAAGGCCCATATGAGACATATGCAGGAAGTCCTGTA
AGCAAGGGTATTCTCCAGCCAGACATGTGGGGAATAACACCATCAGATAAATGGGATTGG
CATGCTCTTCGTGAAATGATTGCAAATAATGGTGTAAGAAATTCACTTCTTGTAGCTCCA
ATGCCAACTGCTTCAACCAGCCAAATTCTTGGAAATAATGAATGCTTTGAGCCATATACA
TCTAATATCTACAGCCGAAGGGTTCTGAGTGGTGAATTTGTTGTGGTGAACAAACATCTT
CTGCATGACCTAACCGAGATGGGGCTCTGGTCACCTGCTGTTAAGAATAGGATAATATAT
GATGATGGTTCTGTGCAGAAAATCCCTGAAATTCCAGATGATCTTAAAGTTATTTATAAG
ACTGTTTGGGAGATCAAGCAACGGACCCTGGTTGATATGGCTGTAGACCGTGGTTGCTAC
ATAGATCAGAGTCAAAGCCTCAACATCCATATGGATCAACCCAATTTTGGAAAGCTCACG
TCCCTTCATTTTCATGCTTGGTCCAGGGGTTTGAAAACTGGAATGTACTATCTACGATCA
CGTGCTGCAGCTGATGCTATCAAGTTCACAGTTGACACTTCAATGCTGAAGGAAAAGCCA
AAGACTGCTGTTGACGAAGAAACTAAAATGGCTCAGATGGTGTGCTCTTTGACAAACCGT
GAGGACTGTTTATCCTGTGGAAGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400034225
PEP Infomation

pacid=37472478 transcript=PGSC0003DMT400050716 locus=PGSC0003DMG400019692 ID=PGSC0003DMT400050716.v4.03 annot-version=v4.03
Sequence

MYVVKRDGRQETVHFDKITARLKKLSYGLSTDHCDPVLVSQKVCAGVYKGVTTSQLDELA
AETAAAMTANHPDYACLAARIAVSNLHKNTKKSFSETIKDMYYHVSERSGLKAPLVSDEV
YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKIQGKIVERPQHMLMRVSVGIHK
EDIESVIKTYQLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
LEPWHADIFEFLDLRKNHGKEENRARDLFYALWVPDLFMQRVQSNGVWSLFCPCEAPGLA
DCWGEDFEKLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLYKDSCNRKSNQQNL
GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRYVREKGVPGESQPSKLVGSRGSKNRYF
DFDKLAEVTALVTSNLNKIIDVNYYPVETAKRSNLRHRPIGLGVQGLADTFILLGMAFDS
QEAQQLNKDIFETIYYHALKASSELAAKEGPYETYAGSPVSKGILQPDMWGITPSDKWDW
HALREMIANNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
LHDLTEMGLWSPAVKNRIIYDDGSVQKIPEIPDDLKVIYKTVWEIKQRTLVDMAVDRGCY
IDQSQSLNIHMDQPNFGKLTSLHFHAWSRGLKTGMYYLRSRAAADAIKFTVDTSMLKEKP
KTAVDEETKMAQMVCSLTNREDCLSCGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400050716
Transcript Infomation

pacid=37472478 locus=PGSC0003DMG400019692 ID=PGSC0003DMT400050716.v4.03 annot-version=v4.03
Sequence

ATGTATGTGGTGAAGAGAGATGGGCGTCAGGAAACTGTTCACTTTGATAAGATTACTGCT
AGGCTTAAGAAATTGAGTTATGGGTTAAGTACTGATCATTGTGATCCGGTTCTTGTTTCT
CAGAAGGTTTGTGCTGGTGTTTACAAGGGTGTTACTACTAGTCAGCTTGATGAATTGGCT
GCGGAAACTGCTGCTGCTATGACTGCTAATCATCCTGATTATGCCTGTCTGGCTGCAAGG
ATTGCTGTGTCCAACCTGCACAAGAACACCAAGAAATCATTTTCCGAGACGATTAAGGAC
ATGTACTACCATGTTAGTGAGAGATCTGGATTGAAGGCACCACTGGTTTCTGATGAAGTT
TATGAGATAATCATGAAGAATGCTGCTCGTCTGGACAGTGAGATCATATACGACAGAGAC
TTTGACTATGATTACTTTGGTTTCAAAACCCTTGAAAGGTCTTACCTCTTAAAGATTCAG
GGAAAGATTGTAGAAAGGCCACAACACATGCTGATGAGAGTATCTGTTGGAATCCACAAA
GAGGATATTGAATCTGTCATCAAGACATATCAGTTGATGTCTCAACGCTGGTTCACTCAT
GCATCTCCAACACTATTTAATGCTGGCACTCCAAGGCCTCAATTAAGTAGCTGCTTCCTG
ATATGCATGAAAGATGATAGTATTGAGGGCATATATGATACTCTTAAGGAATGTGCTGTT
ATTAGCAAATCAGCTGGGGGAATTGGCGTATCTGTGCACAACATACGTGCTACTGGGAGT
TATATTCGTGGAACAAACGGAACATCAAATGGGATTGTTCCTATGCTGCGTGTGTTTAAT
GATACTGCCAGATATGTTGATCAAGGGGGTGGCAAAAGAAAGGGTGCTTTTGCTGTCTAC
CTTGAGCCTTGGCATGCTGATATATTTGAATTTCTGGATTTAAGGAAGAACCATGGGAAG
GAAGAGAATCGGGCACGGGATCTTTTCTATGCTCTTTGGGTACCAGATCTTTTTATGCAA
AGAGTCCAAAGCAATGGGGTATGGTCTTTGTTTTGTCCATGTGAGGCTCCTGGATTGGCA
GATTGCTGGGGTGAAGATTTTGAGAAGCTATACACAAAATATGAAAAAGAGGGAAAGGCA
AAGAAGGTCGTTCAGGCACAAAATCTCTGGTTTGAGATCTTAAAGTCCCAGATAGAAACT
GGGACCCCTTACATGTTGTACAAGGATTCTTGCAATAGAAAAAGCAACCAGCAGAATCTT
GGCACTATCAAGTCTTCTAACTTGTGTACAGAGATTATTGAGTACACAAGTCCAACTGAA
ACTGCTGTTTGCAATCTTGCTTCAATTGCTCTACCAAGATATGTTAGAGAGAAGGGGGTC
CCAGGTGAATCACAACCATCTAAGCTTGTGGGGAGTAGAGGTTCTAAAAATCGATACTTT
GATTTTGACAAATTGGCAGAGGTTACTGCATTAGTCACTTCAAACCTGAACAAAATTATT
GATGTCAATTACTACCCTGTTGAAACTGCAAAAAGGTCTAACTTACGACATAGGCCTATT
GGACTTGGAGTCCAGGGACTTGCAGACACATTCATTTTGCTTGGCATGGCATTTGATTCC
CAGGAGGCTCAGCAGCTAAACAAGGACATATTTGAGACAATATACTACCATGCATTAAAA
GCTTCTTCTGAATTAGCTGCCAAGGAAGGCCCATATGAGACATATGCAGGAAGTCCTGTA
AGCAAGGGTATTCTCCAGCCAGACATGTGGGGAATAACACCATCAGATAAATGGGATTGG
CATGCTCTTCGTGAAATGATTGCAAATAATGGTGTAAGAAATTCACTTCTTGTAGCTCCA
ATGCCAACTGCTTCAACCAGCCAAATTCTTGGAAATAATGAATGCTTTGAGCCATATACA
TCTAATATCTACAGCCGAAGGGTTCTGAGTGGTGAATTTGTTGTGGTGAACAAACATCTT
CTGCATGACCTAACCGAGATGGGGCTCTGGTCACCTGCTGTTAAGAATAGGATAATATAT
GATGATGGTTCTGTGCAGAAAATCCCTGAAATTCCAGATGATCTTAAAGTTATTTATAAG
ACTGTTTGGGAGATCAAGCAACGGACCCTGGTTGATATGGCTGTAGACCGTGGTTGCTAC
ATAGATCAGAGTCAAAGCCTCAACATCCATATGGATCAACCCAATTTTGGAAAGCTCACG
TCCCTTCATTTTCATGCTTGGTCCAGGGGTTTGAAAACTGGAATGTACTATCTACGATCA
CGTGCTGCAGCTGATGCTATCAAGTTCACAGTTGACACTTCAATGCTGAAGGAAAAGCCA
AAGACTGCTGTTGACGAAGAAACTAAAATGGCTCAGATGGTGTGCTCTTTGACAAACCGT
GAGGACTGTTTATCCTGTGGAAGTTAG