Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050673
CDS Infomation

pacid=37464628 polypeptide=PGSC0003DMP400034203 locus=PGSC0003DMG401019681 ID=PGSC0003DMT400050673.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTCTGTTTCCAAACCAATTTTCTCTCTCTAAAATCCTCTCTTTATCTCTCTTC
ATCTCCATCTTCTTCTTCACCATATCTCATTCCGACGATTTCTCAGCTCTTTTAGCCTTC
AAATCCCGAGCTGATACGTCGAATTTTCTCACTTCATGGTCTAGAAATGCCCCCTGTTCT
TCATGGATAGGTGTAAAATGTCATCCAATTACTCGTAGAGTCGTAAAAATTGTACTCAAT
CACTTAAATCTCACCGGATCAATTCATCCATTGATTCATCTTACACAAATTCGGCATCTA
AGTTTACACCACAATTCTCTCAGTTCGATTCCGAATTTCGATTTTTGGCCTAATCTCAAA
CACGTTTACCTCTCTAACAACAAGTTTTCCGGTGAATTTCCGCCAGGAATTTACCTTTTG
AAGCGACTCAGGCGACTTGATTTGTCATTTAATGAGTTTTCCGGTGAGATTCCGGTGAAG
GAGTTGAATCAATTGCCGCATTTGATGACTCTGCGTCTCGAGTTTAATTCTCTTAGCGGA
TCACTTGGTGCTGATGAAAAAAAAACTGTTGCTTCAGTTAAGGAATTCAATGTTTCTGGG
AATAACTTTTCTGGGAAAATCCCAAATTGGTTATCAAAATTTCCAGTGGCAGCTTTTGCA
GGAAACGTTCGTCTTTGTGGATATCCATTACGAACTATTTGCCCGAGCGAAACAGTGGAT
AGTAATCCAACAGTGATGAATACTCCTAATTCACAATTCAACTTTCTTAATCAAAGAAAG
AAGAATTTGAGTGAAAACATGTTCCTATTGATAGTCACACTTGATGCAATTGGCGTTATG
ATGACGGTTTTGGTAATAACATGGTGTTGTTATTACAGAAAGAAGAATCAAGAGAGTGAA
ATTGACAGATTGAGAAAGACGAATAGGAAGTATAATAATCAGGACACGAGTAGTTCAAGT
CTGTATCATTCATTTGAATATGGTATCAAGAAAACAAGTGATCAGTTTGCAACAATGGTT
TGTTTTGAAGGATGTAAAGGTTTCAATAAAGTTGATGATTTGTTGAAGGCCTCAGCTGAA
ATGTTGGGAAAAGGGAGTGTTGGAACAAGTTATAAAGTGGCTATTTTGGATAATGGAGAT
GTTGTTGTGGTTAAAAGAGTAATTGAAAAGTTGAAGAAAATGAAAGATGTTGATGGATTT
TTGAGATTAATTGGAAATTTGAGACATACAAATGTTGTGCCACTTAGAGCTTATTATTCA
TCAAAAGAGGAATTGCTTCTTGTCTATGATTTTCTTCCCAATGGTAGTCTACACAATCTC
TTACATGGTAATCGTGGACCGGGAAGAACACCATTGGATTGGACAACAAGACTAAAATAT
GCATTAGGAGCAGCAAAAGGACTTAGTTTTTTACATAGCTACAACAAAACCAAGATTTGC
CATGGGAATTTCACATCATCAAACATACTAATTGATCACAATGGCAATGCTTGTATCTCT
GATATATGTCTCCACTTGCTCTTACAAATGCCAATTTCATCAAACAATGGATACAAAGCA
CCAGAATTATCAACACAAAACAATGTAAACACAAACCAAAATCCAAGAAAATTTTCTCAA
AAGAGTGATGTGTATAGCTTTGGAGTGGTTTTACTAGAGATTTTGACTGGGAAAATTGCA
ACAAGTGAAAGGGAAACAAGTTTGGCAAAATGGATACAAAGTGTTGTGAACAAAGAATGG
ACTTGGGATGTGTTTGATTTTGAACTTGCAAGGTATAAAGAAAGGGAAGATGAAATGGTT
GCACTTTTAAAAGTGGCTATGGCTTGTTTGGTTTCATCTCCAAAAGATAGGCCAAAGATG
ATTGTAGTGGAGGAAATGATCGAAGACATCGCAAAAAAAGAGAACAAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400034203
PEP Infomation

pacid=37464628 transcript=PGSC0003DMT400050673 locus=PGSC0003DMG401019681 ID=PGSC0003DMT400050673.v4.03 annot-version=v4.03
Sequence

MAALFPNQFSLSKILSLSLFISIFFFTISHSDDFSALLAFKSRADTSNFLTSWSRNAPCS
SWIGVKCHPITRRVVKIVLNHLNLTGSIHPLIHLTQIRHLSLHHNSLSSIPNFDFWPNLK
HVYLSNNKFSGEFPPGIYLLKRLRRLDLSFNEFSGEIPVKELNQLPHLMTLRLEFNSLSG
SLGADEKKTVASVKEFNVSGNNFSGKIPNWLSKFPVAAFAGNVRLCGYPLRTICPSETVD
SNPTVMNTPNSQFNFLNQRKKNLSENMFLLIVTLDAIGVMMTVLVITWCCYYRKKNQESE
IDRLRKTNRKYNNQDTSSSSLYHSFEYGIKKTSDQFATMVCFEGCKGFNKVDDLLKASAE
MLGKGSVGTSYKVAILDNGDVVVVKRVIEKLKKMKDVDGFLRLIGNLRHTNVVPLRAYYS
SKEELLLVYDFLPNGSLHNLLHGNRGPGRTPLDWTTRLKYALGAAKGLSFLHSYNKTKIC
HGNFTSSNILIDHNGNACISDICLHLLLQMPISSNNGYKAPELSTQNNVNTNQNPRKFSQ
KSDVYSFGVVLLEILTGKIATSERETSLAKWIQSVVNKEWTWDVFDFELARYKEREDEMV
ALLKVAMACLVSSPKDRPKMIVVEEMIEDIAKKENK*

Transcript Sequence

Transcript ID

PGSC0003DMT400050673
Transcript Infomation

pacid=37464628 locus=PGSC0003DMG401019681 ID=PGSC0003DMT400050673.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTCTGTTTCCAAACCAATTTTCTCTCTCTAAAATCCTCTCTTTATCTCTCTTC
ATCTCCATCTTCTTCTTCACCATATCTCATTCCGACGATTTCTCAGCTCTTTTAGCCTTC
AAATCCCGAGCTGATACGTCGAATTTTCTCACTTCATGGTCTAGAAATGCCCCCTGTTCT
TCATGGATAGGTGTAAAATGTCATCCAATTACTCGTAGAGTCGTAAAAATTGTACTCAAT
CACTTAAATCTCACCGGATCAATTCATCCATTGATTCATCTTACACAAATTCGGCATCTA
AGTTTACACCACAATTCTCTCAGTTCGATTCCGAATTTCGATTTTTGGCCTAATCTCAAA
CACGTTTACCTCTCTAACAACAAGTTTTCCGGTGAATTTCCGCCAGGAATTTACCTTTTG
AAGCGACTCAGGCGACTTGATTTGTCATTTAATGAGTTTTCCGGTGAGATTCCGGTGAAG
GAGTTGAATCAATTGCCGCATTTGATGACTCTGCGTCTCGAGTTTAATTCTCTTAGCGGA
TCACTTGGTGCTGATGAAAAAAAAACTGTTGCTTCAGTTAAGGAATTCAATGTTTCTGGG
AATAACTTTTCTGGGAAAATCCCAAATTGGTTATCAAAATTTCCAGTGGCAGCTTTTGCA
GGAAACGTTCGTCTTTGTGGATATCCATTACGAACTATTTGCCCGAGCGAAACAGTGGAT
AGTAATCCAACAGTGATGAATACTCCTAATTCACAATTCAACTTTCTTAATCAAAGAAAG
AAGAATTTGAGTGAAAACATGTTCCTATTGATAGTCACACTTGATGCAATTGGCGTTATG
ATGACGGTTTTGGTAATAACATGGTGTTGTTATTACAGAAAGAAGAATCAAGAGAGTGAA
ATTGACAGATTGAGAAAGACGAATAGGAAGTATAATAATCAGGACACGAGTAGTTCAAGT
CTGTATCATTCATTTGAATATGGTATCAAGAAAACAAGTGATCAGTTTGCAACAATGGTT
TGTTTTGAAGGATGTAAAGGTTTCAATAAAGTTGATGATTTGTTGAAGGCCTCAGCTGAA
ATGTTGGGAAAAGGGAGTGTTGGAACAAGTTATAAAGTGGCTATTTTGGATAATGGAGAT
GTTGTTGTGGTTAAAAGAGTAATTGAAAAGTTGAAGAAAATGAAAGATGTTGATGGATTT
TTGAGATTAATTGGAAATTTGAGACATACAAATGTTGTGCCACTTAGAGCTTATTATTCA
TCAAAAGAGGAATTGCTTCTTGTCTATGATTTTCTTCCCAATGGTAGTCTACACAATCTC
TTACATGGTAATCGTGGACCGGGAAGAACACCATTGGATTGGACAACAAGACTAAAATAT
GCATTAGGAGCAGCAAAAGGACTTAGTTTTTTACATAGCTACAACAAAACCAAGATTTGC
CATGGGAATTTCACATCATCAAACATACTAATTGATCACAATGGCAATGCTTGTATCTCT
GATATATGTCTCCACTTGCTCTTACAAATGCCAATTTCATCAAACAATGGATACAAAGCA
CCAGAATTATCAACACAAAACAATGTAAACACAAACCAAAATCCAAGAAAATTTTCTCAA
AAGAGTGATGTGTATAGCTTTGGAGTGGTTTTACTAGAGATTTTGACTGGGAAAATTGCA
ACAAGTGAAAGGGAAACAAGTTTGGCAAAATGGATACAAAGTGTTGTGAACAAAGAATGG
ACTTGGGATGTGTTTGATTTTGAACTTGCAAGGTATAAAGAAAGGGAAGATGAAATGGTT
GCACTTTTAAAAGTGGCTATGGCTTGTTTGGTTTCATCTCCAAAAGATAGGCCAAAGATG
ATTGTAGTGGAGGAAATGATCGAAGACATCGCAAAAAAAGAGAACAAATAG