Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050662
CDS Infomation

pacid=37466831 polypeptide=PGSC0003DMP400034195 locus=PGSC0003DMG400019676 ID=PGSC0003DMT400050662.v4.03 annot-version=v4.03
Sequence

ATGTCTCACCAGGCCGAGTCATCTGACTCAAAAAATGCTAAGAAGGATTTTTCTACGGCG
ATTTTGGAGCGGAAGAAAGCTGCGAATAGGCTTATTGTAGATGAAACGGTCAACGATGAT
AATTCCGTTGTCGCTTTACATCCTGCTACTATGGAGAAACTTCAGCTTTTCCGTGGAGAT
ACAATTCTCATCAAGGGAAAGAAGAGAAAGGATACAGTTGTCATTGCCCTTGCTGATGAA
ACATGTGATGAGCCTAAGATTAGGATGAACAAGGTAGTCCGTTCAAATTTGAGGGTTCGT
CTCGGAGATGTTGTATCTGTGCACCAGTGTCCAGATGTCAAATATGGGAAGCGTGTCCAC
ATACTTCCTATTGATGATACAATAGAAGGTCTCACAGGGGATTTGTTTGATGCATTCCTG
AAACCTTACTTTTTGGAGGCATATCGTCCATTGAGGAAGGGAGACAATTTTCTTGTTAGA
GGAGGGATGAGAAGTGTGGAATTCAAGGTCATAGAAACTGACCCTGGGGAGTATTGTGTT
GTTGCTCCAGACACTGAAATCTTTTGTGAGGGTGAGCCTGTGAAAAGGGAGGATGAGGAG
AGACTTGATGAAGTTGGCTATGATGATGTGGGTGGTGTGAGAAAACAGATGGCCCAGATT
CGTGAACTGGTGGAACTACCATTGAGGCATCCTCAACTTTTCAAATCTATTGGTGTGAAA
CCACCAAAGGGAATTTTACTTTATGGACCCCCTGGTTCTGGAAAGACTTTGATAGCCAGA
GCTGTTGCTAATGAAACAGGTGCATTTTTCTTTTGCATTAATGGACCTGAAATCATGTCC
AAATTGGCTGGAGAGAGTGAAAGTAATCTCAGAAAGGCATTTGAAGAGGCGGAAAAGAAT
GCTCCTTCTATCATATTTATTGACGAAATTGATTCAATTGCTCCCAAGCGAGAGAAGACA
CACGGTGAAGTTGAAAGGAGGATTGTCTCACAACTCTTGACTCTGATGGATGGACTGAAA
TCTCGCGCTCATGTTATAGTGATGGGAGCTACCAACCGTCCAAACAGCATTGATCCAGCT
CTGAGAAGGTTTGGTAGGTTTGATAGAGAAATAGACATTGGTGTTCCTGACGAAGTTGGG
CGTCTTGAAGTTCTTCGCATTCATACCAAGAATATGAAGCTTGCGGAAGAAGTCGATTTG
GAAAGAATTGGGAAAGATACACATGGTTATGTTGGGGCAGATCTTGCTGCTCTTTGCACT
GAAGCTGCACTTCAGTGTATTAGGGAGAAGATGGATGTCATTGATCTGGAAGACGATACT
ATTGATGCTGAGGTGTTGAACTCAATGGCTGTAACAAATGAGCACTTCCAAACTGCTCTT
GGTACAAGCAATCCGTCTGCATTGCGTGAAACAGTGGTTGAAGTGCCTAATGTCTCATGG
CAAGACATTGGAGGCCTTGAAAATGTCAAGCGAGAGCTTCAAGAGACTGTTCAATATCCA
GTGGAACACCCAGAGAAGTTTGAGAAGTTTGGTATGTCACCTTCAAAAGGTGTACTTTTC
TATGGTCCCCCAGGATGTGGGAAAACCCTACTTGCCAAGGCAATTGCAAATGAATGTCAA
GCCAATTTTATCAGTATCAAAGGACCTGAACTGCTCACCATGTGGTTTGGAGAGAGTGAG
GCGAATGTTCGTGAAATTTTCGATAAAGCAAGACAATCTGCACCTTGCGTCCTCTTCTTT
GATGAGCTTGACTCTATTGCTACTCAGAGGGGAAGCAGCAGTGGAGATGCTGGAGGAGCA
GCTGATCGTGTTTTGAACCAACTTCTGACTGAAATGGATGGCATGAATGCAAAGAAGACT
GTTTTTATAATTGGGGCAACAAACAGGCCTGATATAATTGACCCTGCACTTCTTCGACCT
GGCCGTCTTGACCAGTTAATTTATATTCCTCTGCCAGATGAAGATTCACGCCATCAGATT
TTTAAGGCATGTCTCAGAAAATCCCCCCTATCAAAGGATATTGATCTGAGAGCTCTCGCC
AAACATACTCAGGGATTTAGTGGGGCTGATATCACTGAGATTTGTCAACGAGCCTGCAAA
TATGCCATAAGGGAGAACATAGAGAAAGATATAGAAAGGGAGAAGAGAAGACAGGAGAAT
CCCGATTCGATGGATGAGGATGTTGATGAAGTACCAGAGATCAAGCCTGCTCATTTTGAG
GAGTCTATGAAGTATGCACGCCGAAGTGTCAGTGATGCTGATATACGCAAATACCAGGCA
TTTGCGCAGACATTACAGCAGTCTAGAGGTTTTGGAACAGAATTTCGATTTGCAGAGGCT
AGTAGCGGCGGGACTGCTGCAGCTGATCCATTTGCAACTTCTAATGCTGCAGCCGATGAC
GATGACCTATATAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400034195
PEP Infomation

pacid=37466831 transcript=PGSC0003DMT400050662 locus=PGSC0003DMG400019676 ID=PGSC0003DMT400050662.v4.03 annot-version=v4.03
Sequence

MSHQAESSDSKNAKKDFSTAILERKKAANRLIVDETVNDDNSVVALHPATMEKLQLFRGD
TILIKGKKRKDTVVIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGLTGDLFDAFLKPYFLEAYRPLRKGDNFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEEVDLERIGKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDTIDAEVLNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
QDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPLSKDIDLRALAKHTQGFSGADITEICQRACKYAIRENIEKDIEREKRRQEN
PDSMDEDVDEVPEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAEA
SSGGTAAADPFATSNAAADDDDLYS*

Transcript Sequence

Transcript ID

PGSC0003DMT400050662
Transcript Infomation

pacid=37466831 locus=PGSC0003DMG400019676 ID=PGSC0003DMT400050662.v4.03 annot-version=v4.03
Sequence

ATGTCTCACCAGGCCGAGTCATCTGACTCAAAAAATGCTAAGAAGGATTTTTCTACGGCG
ATTTTGGAGCGGAAGAAAGCTGCGAATAGGCTTATTGTAGATGAAACGGTCAACGATGAT
AATTCCGTTGTCGCTTTACATCCTGCTACTATGGAGAAACTTCAGCTTTTCCGTGGAGAT
ACAATTCTCATCAAGGGAAAGAAGAGAAAGGATACAGTTGTCATTGCCCTTGCTGATGAA
ACATGTGATGAGCCTAAGATTAGGATGAACAAGGTAGTCCGTTCAAATTTGAGGGTTCGT
CTCGGAGATGTTGTATCTGTGCACCAGTGTCCAGATGTCAAATATGGGAAGCGTGTCCAC
ATACTTCCTATTGATGATACAATAGAAGGTCTCACAGGGGATTTGTTTGATGCATTCCTG
AAACCTTACTTTTTGGAGGCATATCGTCCATTGAGGAAGGGAGACAATTTTCTTGTTAGA
GGAGGGATGAGAAGTGTGGAATTCAAGGTCATAGAAACTGACCCTGGGGAGTATTGTGTT
GTTGCTCCAGACACTGAAATCTTTTGTGAGGGTGAGCCTGTGAAAAGGGAGGATGAGGAG
AGACTTGATGAAGTTGGCTATGATGATGTGGGTGGTGTGAGAAAACAGATGGCCCAGATT
CGTGAACTGGTGGAACTACCATTGAGGCATCCTCAACTTTTCAAATCTATTGGTGTGAAA
CCACCAAAGGGAATTTTACTTTATGGACCCCCTGGTTCTGGAAAGACTTTGATAGCCAGA
GCTGTTGCTAATGAAACAGGTGCATTTTTCTTTTGCATTAATGGACCTGAAATCATGTCC
AAATTGGCTGGAGAGAGTGAAAGTAATCTCAGAAAGGCATTTGAAGAGGCGGAAAAGAAT
GCTCCTTCTATCATATTTATTGACGAAATTGATTCAATTGCTCCCAAGCGAGAGAAGACA
CACGGTGAAGTTGAAAGGAGGATTGTCTCACAACTCTTGACTCTGATGGATGGACTGAAA
TCTCGCGCTCATGTTATAGTGATGGGAGCTACCAACCGTCCAAACAGCATTGATCCAGCT
CTGAGAAGGTTTGGTAGGTTTGATAGAGAAATAGACATTGGTGTTCCTGACGAAGTTGGG
CGTCTTGAAGTTCTTCGCATTCATACCAAGAATATGAAGCTTGCGGAAGAAGTCGATTTG
GAAAGAATTGGGAAAGATACACATGGTTATGTTGGGGCAGATCTTGCTGCTCTTTGCACT
GAAGCTGCACTTCAGTGTATTAGGGAGAAGATGGATGTCATTGATCTGGAAGACGATACT
ATTGATGCTGAGGTGTTGAACTCAATGGCTGTAACAAATGAGCACTTCCAAACTGCTCTT
GGTACAAGCAATCCGTCTGCATTGCGTGAAACAGTGGTTGAAGTGCCTAATGTCTCATGG
CAAGACATTGGAGGCCTTGAAAATGTCAAGCGAGAGCTTCAAGAGACTGTTCAATATCCA
GTGGAACACCCAGAGAAGTTTGAGAAGTTTGGTATGTCACCTTCAAAAGGTGTACTTTTC
TATGGTCCCCCAGGATGTGGGAAAACCCTACTTGCCAAGGCAATTGCAAATGAATGTCAA
GCCAATTTTATCAGTATCAAAGGACCTGAACTGCTCACCATGTGGTTTGGAGAGAGTGAG
GCGAATGTTCGTGAAATTTTCGATAAAGCAAGACAATCTGCACCTTGCGTCCTCTTCTTT
GATGAGCTTGACTCTATTGCTACTCAGAGGGGAAGCAGCAGTGGAGATGCTGGAGGAGCA
GCTGATCGTGTTTTGAACCAACTTCTGACTGAAATGGATGGCATGAATGCAAAGAAGACT
GTTTTTATAATTGGGGCAACAAACAGGCCTGATATAATTGACCCTGCACTTCTTCGACCT
GGCCGTCTTGACCAGTTAATTTATATTCCTCTGCCAGATGAAGATTCACGCCATCAGATT
TTTAAGGCATGTCTCAGAAAATCCCCCCTATCAAAGGATATTGATCTGAGAGCTCTCGCC
AAACATACTCAGGGATTTAGTGGGGCTGATATCACTGAGATTTGTCAACGAGCCTGCAAA
TATGCCATAAGGGAGAACATAGAGAAAGATATAGAAAGGGAGAAGAGAAGACAGGAGAAT
CCCGATTCGATGGATGAGGATGTTGATGAAGTACCAGAGATCAAGCCTGCTCATTTTGAG
GAGTCTATGAAGTATGCACGCCGAAGTGTCAGTGATGCTGATATACGCAAATACCAGGCA
TTTGCGCAGACATTACAGCAGTCTAGAGGTTTTGGAACAGAATTTCGATTTGCAGAGGCT
AGTAGCGGCGGGACTGCTGCAGCTGATCCATTTGCAACTTCTAATGCTGCAGCCGATGAC
GATGACCTATATAGCTGA