Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050589
CDS Infomation

pacid=37464165 polypeptide=PGSC0003DMP400034162 locus=PGSC0003DMG400019662 ID=PGSC0003DMT400050589.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAATACAGTCCCAATCGGATCATTATAGGTCTTCATCTTCTTCGGCAAGTAGT
CCAGCGAGTAGGGTGCCATCAAGTAATTTCTTCTACTTGAGGAAACCTGGTTCACTTAGA
CAACCAATTTCATTTGAAGATTCACCTGATTGGGAAGACACAGATATTGAAGTCAGAGTG
GACGAAGGAGGTGATTCCATCAATGCTGCAACTACACCAGCCTCCCCTTCCCTGTCAAAG
CTTAACAGTGGTTCGTTGCCGTCTCCACCTTTACCAGATGGGGCAGTTATTACAAGGAAA
ATTGCTGGCGCATCTATTGCCTGGAAGGATTTGACAGTTACAATAAAGGGAAAACGGAAA
TACTCTGATAAGGTGGTCAAGAGTTCGAATGGTTATGCATTACCTGGTACAATGACTGTA
ATTATGGGACCTGCCAAGTCAGGGAAATCAACGCTCTTGAGAGCCCTTTCAGGAAGGTTG
CCTGATTCAGCCAGAATGTATGGTGAGGTTTTTGTAAATGGGACGAAAATGTGCATGCCT
TATGGCTCCTATGGATTTGTTGACAGAGAAACTACTCTTATTGGAACGTTGACAGTGCGT
GAATTCCTCTACTACTCAGCATTGCTTCAGCTTCCTGGTTTTCTTTGTCAGAAAAGGAGT
GTGGTGGAAGATGCTATTGATTCTATGTCACTGGGAGATTATGCTAATAAACTTATAGGT
GGACACTGCTACATGAAAGGTCTTCGAAGTGGCGAGAGAAGGCGTGTCAGTATTGCCAGG
GAACTTGTTATGAGACCACACATTTTATTTATAGATGAACCCCTTTATCGGCTTGACAGT
GTTTCTACACTTCTGATGATGGTTACACTGAAGAAGCTCGCAAGTACCGGCTGCACTCTG
ATATTCACCATTTACCAAAGCAGTACTGAAGTTTTTGGCCTTTTTGATCGCATTTGCCTC
CTCTCAAATGGAAATACATTGTTTTTTGGGGAAACTTTGGCTTGCTTGCAGCACTTTTCA
AATGCTGGTTTTCCTTGCCCAATCATGCAAAGTCCTTCAGATCATTTCTTGCGTGCCATA
AACACAGAGTTCGACAGGATCATCGCAATGTGCAAAAGTTGGCAGGATGACCACGGAGAC
TTGTCAGCAGTGAACATGGATACTGCTGTTGCTATACGTACCCTTGAAGCAACCTATAAA
TCGTCGGCAGATGCTGTTTCTCTCGAGACTATGATAGTGAAGCTCACTGAGAAGGAAGGT
CCATCTCTCAAAAGCAAGGGAATGGTAGGCAACTTAACACGAGTTGCAGTGTTGACTTGG
AGATCCTTATTGATTATGTCAAGGGAGTGGAAATACTATTGGCTTAGGTTGATTCTATAT
ATGCTTCTCGCACTTTGCATCGGTACTGTATTTTCTGGATTGGGGCATACCTTATCATCT
GTTGTGACACGAGTCGCAGCAATTTTTGTATTTGTTTCATTCACCTCTCTATTGAGCATT
GCCGGTGTACCTGCACAGATGAAAGAAATTAAGATATACGCCTGTGAAGAATCAAACCAG
CATTCTGGTGCATTTATTTTCCTACTTGGGCAGCTTTTTGCCAGCATACCTTTCTTGTTT
CTCATCTCCATTTCATCAAGTCTCGTCTTCTATTTTCTTGTTGGCCTGCGGGATGAGTTC
AGCATGCTGATATATTTCGTGCTGAATTTCTTTACATGCCTATTGGTAAATGAAGGGTTG
GTACTCGCTGTTACTTCCATTTGGCAAGACATCTTCTGGAGCATCTTGATTTTTGTCTCC
ATACAAGTGATAATGATGCTTTCTGCTGGCTTTTTAAGAATCCGAAGTTCTTTGCCAGGA
CCAGTATGGATGTACCCCATTTCTTATATAGCTTTTCATACTTACTCTATCCAGGGGCTC
TTGGAGAACGAGTACATCGAGACCTCTTTTGCAGTTGGTCAGGTGAGGACCATATCTGGT
AATCAGGCTTTGCAAAATGTATATGACATATCTGCTGATAGCAACTCTAAGTGGAAAAAT
TTGTTAGTATTGTTTCTTATGGCTGTTGCATACAGAGTTCTTGTTTTTGTTTTGCTCAAG
TTTTATGTCAGGAAAAACCTCTTTGTACCCAAACTATTTCTCTGTAACCAAAATACAAGG
AATTCAAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400034162
PEP Infomation

pacid=37464165 transcript=PGSC0003DMT400050589 locus=PGSC0003DMG400019662 ID=PGSC0003DMT400050589.v4.03 annot-version=v4.03
Sequence

MEEIQSQSDHYRSSSSSASSPASRVPSSNFFYLRKPGSLRQPISFEDSPDWEDTDIEVRV
DEGGDSINAATTPASPSLSKLNSGSLPSPPLPDGAVITRKIAGASIAWKDLTVTIKGKRK
YSDKVVKSSNGYALPGTMTVIMGPAKSGKSTLLRALSGRLPDSARMYGEVFVNGTKMCMP
YGSYGFVDRETTLIGTLTVREFLYYSALLQLPGFLCQKRSVVEDAIDSMSLGDYANKLIG
GHCYMKGLRSGERRRVSIARELVMRPHILFIDEPLYRLDSVSTLLMMVTLKKLASTGCTL
IFTIYQSSTEVFGLFDRICLLSNGNTLFFGETLACLQHFSNAGFPCPIMQSPSDHFLRAI
NTEFDRIIAMCKSWQDDHGDLSAVNMDTAVAIRTLEATYKSSADAVSLETMIVKLTEKEG
PSLKSKGMVGNLTRVAVLTWRSLLIMSREWKYYWLRLILYMLLALCIGTVFSGLGHTLSS
VVTRVAAIFVFVSFTSLLSIAGVPAQMKEIKIYACEESNQHSGAFIFLLGQLFASIPFLF
LISISSSLVFYFLVGLRDEFSMLIYFVLNFFTCLLVNEGLVLAVTSIWQDIFWSILIFVS
IQVIMMLSAGFLRIRSSLPGPVWMYPISYIAFHTYSIQGLLENEYIETSFAVGQVRTISG
NQALQNVYDISADSNSKWKNLLVLFLMAVAYRVLVFVLLKFYVRKNLFVPKLFLCNQNTR
NSR*

Transcript Sequence

Transcript ID

PGSC0003DMT400050589
Transcript Infomation

pacid=37464165 locus=PGSC0003DMG400019662 ID=PGSC0003DMT400050589.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAATACAGTCCCAATCGGATCATTATAGGTCTTCATCTTCTTCGGCAAGTAGT
CCAGCGAGTAGGGTGCCATCAAGTAATTTCTTCTACTTGAGGAAACCTGGTTCACTTAGA
CAACCAATTTCATTTGAAGATTCACCTGATTGGGAAGACACAGATATTGAAGTCAGAGTG
GACGAAGGAGGTGATTCCATCAATGCTGCAACTACACCAGCCTCCCCTTCCCTGTCAAAG
CTTAACAGTGGTTCGTTGCCGTCTCCACCTTTACCAGATGGGGCAGTTATTACAAGGAAA
ATTGCTGGCGCATCTATTGCCTGGAAGGATTTGACAGTTACAATAAAGGGAAAACGGAAA
TACTCTGATAAGGTGGTCAAGAGTTCGAATGGTTATGCATTACCTGGTACAATGACTGTA
ATTATGGGACCTGCCAAGTCAGGGAAATCAACGCTCTTGAGAGCCCTTTCAGGAAGGTTG
CCTGATTCAGCCAGAATGTATGGTGAGGTTTTTGTAAATGGGACGAAAATGTGCATGCCT
TATGGCTCCTATGGATTTGTTGACAGAGAAACTACTCTTATTGGAACGTTGACAGTGCGT
GAATTCCTCTACTACTCAGCATTGCTTCAGCTTCCTGGTTTTCTTTGTCAGAAAAGGAGT
GTGGTGGAAGATGCTATTGATTCTATGTCACTGGGAGATTATGCTAATAAACTTATAGGT
GGACACTGCTACATGAAAGGTCTTCGAAGTGGCGAGAGAAGGCGTGTCAGTATTGCCAGG
GAACTTGTTATGAGACCACACATTTTATTTATAGATGAACCCCTTTATCGGCTTGACAGT
GTTTCTACACTTCTGATGATGGTTACACTGAAGAAGCTCGCAAGTACCGGCTGCACTCTG
ATATTCACCATTTACCAAAGCAGTACTGAAGTTTTTGGCCTTTTTGATCGCATTTGCCTC
CTCTCAAATGGAAATACATTGTTTTTTGGGGAAACTTTGGCTTGCTTGCAGCACTTTTCA
AATGCTGGTTTTCCTTGCCCAATCATGCAAAGTCCTTCAGATCATTTCTTGCGTGCCATA
AACACAGAGTTCGACAGGATCATCGCAATGTGCAAAAGTTGGCAGGATGACCACGGAGAC
TTGTCAGCAGTGAACATGGATACTGCTGTTGCTATACGTACCCTTGAAGCAACCTATAAA
TCGTCGGCAGATGCTGTTTCTCTCGAGACTATGATAGTGAAGCTCACTGAGAAGGAAGGT
CCATCTCTCAAAAGCAAGGGAATGGTAGGCAACTTAACACGAGTTGCAGTGTTGACTTGG
AGATCCTTATTGATTATGTCAAGGGAGTGGAAATACTATTGGCTTAGGTTGATTCTATAT
ATGCTTCTCGCACTTTGCATCGGTACTGTATTTTCTGGATTGGGGCATACCTTATCATCT
GTTGTGACACGAGTCGCAGCAATTTTTGTATTTGTTTCATTCACCTCTCTATTGAGCATT
GCCGGTGTACCTGCACAGATGAAAGAAATTAAGATATACGCCTGTGAAGAATCAAACCAG
CATTCTGGTGCATTTATTTTCCTACTTGGGCAGCTTTTTGCCAGCATACCTTTCTTGTTT
CTCATCTCCATTTCATCAAGTCTCGTCTTCTATTTTCTTGTTGGCCTGCGGGATGAGTTC
AGCATGCTGATATATTTCGTGCTGAATTTCTTTACATGCCTATTGGTAAATGAAGGGTTG
GTACTCGCTGTTACTTCCATTTGGCAAGACATCTTCTGGAGCATCTTGATTTTTGTCTCC
ATACAAGTGATAATGATGCTTTCTGCTGGCTTTTTAAGAATCCGAAGTTCTTTGCCAGGA
CCAGTATGGATGTACCCCATTTCTTATATAGCTTTTCATACTTACTCTATCCAGGGGCTC
TTGGAGAACGAGTACATCGAGACCTCTTTTGCAGTTGGTCAGGTGAGGACCATATCTGGT
AATCAGGCTTTGCAAAATGTATATGACATATCTGCTGATAGCAACTCTAAGTGGAAAAAT
TTGTTAGTATTGTTTCTTATGGCTGTTGCATACAGAGTTCTTGTTTTTGTTTTGCTCAAG
TTTTATGTCAGGAAAAACCTCTTTGTACCCAAACTATTTCTCTGTAACCAAAATACAAGG
AATTCAAGATAA