Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050580
CDS Infomation

pacid=37443588 polypeptide=PGSC0003DMP400034154 locus=PGSC0003DMG400019657 ID=PGSC0003DMT400050580.v4.03 annot-version=v4.03
Sequence

ATGTCACAAAATGGTGTACACATCTTAATTTTTCCATTACCAGCACAAGGTCATATACTT
CCCCTTCTTGATTTTACTCATCTACTTCTTCTTCATGGTTTTAAAATTACTATTTTAGTG
ACACCTAAAAATGTCCCGATTCTTGATCCTCTTATTTCCACACATCCATCTGTTAAAACT
CTTGTTTTTCCATTTCCGGGTCACCCATCTCTTCTCGCCGGCACCGAAAACATTAAGGAT
GTGGGGAATGCCGGCGGTCCAGCAATTGTTGTTGGGCTTAGTAAGCTTCGTGGCCCAATA
GTAGAATGGTTTAAGGCCCAATCAAATCCTCCTGTGGCGATTGTTTATGATTTCATCTTG
GGCTGGACTCAAGATTTGGCCCAAGAAGTTAGTGTACCCGGGTTTGTTTTTTACACTTCT
GGGGCTTTATTGATTTCTATTATTATTGATATTTGGAAGAACTTTGAGGCTTATAAAGAT
TTGGGCCTTGTTGAGCTTAATGGGCTTCCTAAAAGTCCAAGATTTGTGAGGGAACATCTT
CCTCCAGTGTGTCTGAAGTTTAAAGAGGATGATCCAACTTGGGAGATTATTAGGAATGGG
TTTATTGCAAATACAAGGAGTTTTGGTTCAATTTTCAATACTTCTGAGGCTTTGGAGAGT
GATTATTTGGGCTTTTTGAAGAAGGAATTGGGCCATGAGCGTGTGTATTCAATTGGGCCG
ATAAATTTAGTTGGTGGGCCGGGTAGAATTGGGAAGTCCTATGAGGCAAATGAGAAAGTT
TTCACTTGGCTTGATGAGTGTCCTAATGAGTCTGTTCTTTATGTAGCTTTTGGAAGCCAA
AAGTTACTAACAAAGGCCCAAATGGAGGCCTTAACTATTGGGCTTGAGAAAAGTGGAGTG
AGGTTCATTTTAGTAGTTAAACAACTGACAGCCCAACAAGAGGAACAAGGTTTTGGATCA
GTGCCACAATGGTTTGAGGAGAGTGTTTCAGGGAGAGGCCTAGTAATAAAAGGTTGGGCC
CCACAAGTGGAGATATTGGGCCATCGAGCCGTTGGTGGGTTTTTGAGTCACTGTGGATGG
AATTCTGTGTTGGAAGCGATAGTGGCGGGAGTAGTCATTTTGGGATGGCCCATGGAGACC
GACCAATTCACCAACATGTGGATGTTGGTGGACAATATGAAGATGTCGATCCGAGTTTGT
GAAGGCGCAGACTCAGTGCCCGACCCGATAGAGTTAGGTCGGAGAATTAATGAGGCAATG
AATAATGATTTGCTCAAGGAGAGGGCCCAAAAAATGAGAGATGAAGCTTATGAAGCTGTT
AAAATTGGAGGGAGCTCTAAAAGGGATTTAGATTTCATTGTAAGAGAGTTGGCCCAACTA
AAAAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400034154
PEP Infomation

pacid=37443588 transcript=PGSC0003DMT400050580 locus=PGSC0003DMG400019657 ID=PGSC0003DMT400050580.v4.03 annot-version=v4.03
Sequence

MSQNGVHILIFPLPAQGHILPLLDFTHLLLLHGFKITILVTPKNVPILDPLISTHPSVKT
LVFPFPGHPSLLAGTENIKDVGNAGGPAIVVGLSKLRGPIVEWFKAQSNPPVAIVYDFIL
GWTQDLAQEVSVPGFVFYTSGALLISIIIDIWKNFEAYKDLGLVELNGLPKSPRFVREHL
PPVCLKFKEDDPTWEIIRNGFIANTRSFGSIFNTSEALESDYLGFLKKELGHERVYSIGP
INLVGGPGRIGKSYEANEKVFTWLDECPNESVLYVAFGSQKLLTKAQMEALTIGLEKSGV
RFILVVKQLTAQQEEQGFGSVPQWFEESVSGRGLVIKGWAPQVEILGHRAVGGFLSHCGW
NSVLEAIVAGVVILGWPMETDQFTNMWMLVDNMKMSIRVCEGADSVPDPIELGRRINEAM
NNDLLKERAQKMRDEAYEAVKIGGSSKRDLDFIVRELAQLKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400050580
Transcript Infomation

pacid=37443588 locus=PGSC0003DMG400019657 ID=PGSC0003DMT400050580.v4.03 annot-version=v4.03
Sequence

ATGTCACAAAATGGTGTACACATCTTAATTTTTCCATTACCAGCACAAGGTCATATACTT
CCCCTTCTTGATTTTACTCATCTACTTCTTCTTCATGGTTTTAAAATTACTATTTTAGTG
ACACCTAAAAATGTCCCGATTCTTGATCCTCTTATTTCCACACATCCATCTGTTAAAACT
CTTGTTTTTCCATTTCCGGGTCACCCATCTCTTCTCGCCGGCACCGAAAACATTAAGGAT
GTGGGGAATGCCGGCGGTCCAGCAATTGTTGTTGGGCTTAGTAAGCTTCGTGGCCCAATA
GTAGAATGGTTTAAGGCCCAATCAAATCCTCCTGTGGCGATTGTTTATGATTTCATCTTG
GGCTGGACTCAAGATTTGGCCCAAGAAGTTAGTGTACCCGGGTTTGTTTTTTACACTTCT
GGGGCTTTATTGATTTCTATTATTATTGATATTTGGAAGAACTTTGAGGCTTATAAAGAT
TTGGGCCTTGTTGAGCTTAATGGGCTTCCTAAAAGTCCAAGATTTGTGAGGGAACATCTT
CCTCCAGTGTGTCTGAAGTTTAAAGAGGATGATCCAACTTGGGAGATTATTAGGAATGGG
TTTATTGCAAATACAAGGAGTTTTGGTTCAATTTTCAATACTTCTGAGGCTTTGGAGAGT
GATTATTTGGGCTTTTTGAAGAAGGAATTGGGCCATGAGCGTGTGTATTCAATTGGGCCG
ATAAATTTAGTTGGTGGGCCGGGTAGAATTGGGAAGTCCTATGAGGCAAATGAGAAAGTT
TTCACTTGGCTTGATGAGTGTCCTAATGAGTCTGTTCTTTATGTAGCTTTTGGAAGCCAA
AAGTTACTAACAAAGGCCCAAATGGAGGCCTTAACTATTGGGCTTGAGAAAAGTGGAGTG
AGGTTCATTTTAGTAGTTAAACAACTGACAGCCCAACAAGAGGAACAAGGTTTTGGATCA
GTGCCACAATGGTTTGAGGAGAGTGTTTCAGGGAGAGGCCTAGTAATAAAAGGTTGGGCC
CCACAAGTGGAGATATTGGGCCATCGAGCCGTTGGTGGGTTTTTGAGTCACTGTGGATGG
AATTCTGTGTTGGAAGCGATAGTGGCGGGAGTAGTCATTTTGGGATGGCCCATGGAGACC
GACCAATTCACCAACATGTGGATGTTGGTGGACAATATGAAGATGTCGATCCGAGTTTGT
GAAGGCGCAGACTCAGTGCCCGACCCGATAGAGTTAGGTCGGAGAATTAATGAGGCAATG
AATAATGATTTGCTCAAGGAGAGGGCCCAAAAAATGAGAGATGAAGCTTATGAAGCTGTT
AAAATTGGAGGGAGCTCTAAAAGGGATTTAGATTTCATTGTAAGAGAGTTGGCCCAACTA
AAAAGTTGA