Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050565
CDS Infomation

pacid=37444007 polypeptide=PGSC0003DMP400034142 locus=PGSC0003DMG400019651 ID=PGSC0003DMT400050565.v4.03 annot-version=v4.03
Sequence

ATGGCAATTGAAGAATTGGCTGTCCGTACTTCTGATATTGTCGATCCACAAGTAATGGAA
ACCTTGTTGATTGAAAATCACTCAAGTGAAGCCAAGGACATGGAAGAGATGAGGAGTTCT
ATGGAAAAGTTGAGTAGAGTAGATTTGGACCTTGCGTATTCTGATGAGAAGTTGACGAAT
CTTGACAATCTTTTGATGCGTGTTTTGGCCTGCGAAAATGAAGTTGAAGCAATATCTTTC
GAGAATGATGAGATTTCTCCTGAATCGATTGAGAAAGTACTGTCGTTGGATCACTTATCT
ATCATTTTAAACTCTGAGATAAGACTACTGGACAATTTCTTAGGCACTCTTCAAGACTTA
GTCATTGAAGCAAGGCAAAAGATACCTACGCGCAGAGAATTTAGTGAGCTACATGTGATA
ATGGAGAATAAATTTCATGATACTGAAGAGTTATTGAGACAATCGAAGGAACGTGTTCTA
GAAATGAAGATACAGCTTGCCAAATTGCAGATGACCTCGTTAGCTTTCGACCAAAATGAA
TGGAGACATAGGATGAGTTTGGATTTATCAGATATTGATAATGTTTCAGCAAGAGAATTG
AAGCCACGCGCACAGACAGTTGAGCAAAGACGTATATTAAGAATGTTGGAAAAATCACTC
GAAAGAGAGCTGGATCTCGAGAAGAAGTTGACTTTACATAAACAAAATGAAGATGATCTA
AAGTTGAAGCTCCGGTTAACCGAGCAAGTAGCTCTGTGCATGGAAGAGGGTGCAGAGGTT
ATATGGGGTAGGTTTTTAGAGTCGGAAAATGCAGCAGAGGTACTTATGGGAATTTCCAGA
GAGATGGTGAGCCGATTACAGGTTGTAAACTTCAATTTGAACGGTTCACTTCAACGAGAG
AAAGATTTCACGTTGAAGATTGATAATTGCATAGGACAGATAAATGCCAAAGATATTACC
ATACAAAACCTTAATAGCAACAACAAACATCTTGCTGTTGAAAATACTGAAGTATCCTCA
TTAAGGGACAAGCTAAAACTTTCAGAAGATAAGTTGAAAGAATCTGAGTCTAAGTTGCTG
AAAGCAAATGAACTGAATGAAGTAAGCGAAGAGCGTCTTAAAGAACTGGAATGTATCGTA
GAATCTCAGAAAGAAGACATCGATATTGCAGAACATAAGGCTGAAAGTGCAGAGGAAAAG
GTTGCACATTTGACTGAGACAAACTTGGAACTGCACGAGGAGTTGGATTTTCTCAAGAGT
AGTAATGAAAATAATGCTAAAAAGGTTAGCATTCTCGAGAAGCAGGTCAGGGAATTAGAA
CTTCAGCTACAAAATGCTAAGACATCATCCGAAGCAGGTCAAGAACAACAGAATATGTTG
TATACTGCCATTTGGGATATGGAAACTTTGATCGATGAACTAAAACAAAAGGTCTTAAAA
GCCGAAAGCAAGACTGAACATGTAGAGGAACAGTGCCTTATTTTGTCTGAAACTAATTTA
GAACTTACCCAAGAAGTGGAGTTTCTAAGATCAAGAGTCGAAGGATTGGAGACTTCGTTG
AATCAAGCTACTGTTGAGAAACTTGCAAGTGCAAAAGACATTAACATCAAAACCAGCTTT
ATAATGGATTTGGTCATGCAACTGGCTATCGAAAGAGAGCGAGTACAAAAACAGATTTTT
TGTTTGGCCAAGGAAAACAAATCATTGATCAGCAAGTTGAAGTCAACGAAGGAGCAACCG
TCCATAAATGTACTTGAGAATGGAGGTGATGATATTGGGTTGTCATCTTCTAGAGTTGCC
TCAACAATCGCTGCTGCTACAGACAGTTGTCGTGAATTGCAAACAGAATCCTCACAGAAA
AGCTCGCAGGTGATCAACGAATTACCTCATGATAAAACGACTGATCAAAGCAGTAAGTCC
TCCGTTTTGACAAATGAAGAGCCTAACATAGTTGTCAAGACAGAGGATACCGAGGTTCAG
CTACAAGCAAAGCAACATCAACACAGGTACATTGTCATGGCAGTCCTCGTCTTATTACTT
TCGACATTAGGATTATATTTTTTTGACAAAAGAAACGACATCCTCGAGTGGTTGATGGTT
AGATTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400034142
PEP Infomation

pacid=37444007 transcript=PGSC0003DMT400050565 locus=PGSC0003DMG400019651 ID=PGSC0003DMT400050565.v4.03 annot-version=v4.03
Sequence

MAIEELAVRTSDIVDPQVMETLLIENHSSEAKDMEEMRSSMEKLSRVDLDLAYSDEKLTN
LDNLLMRVLACENEVEAISFENDEISPESIEKVLSLDHLSIILNSEIRLLDNFLGTLQDL
VIEARQKIPTRREFSELHVIMENKFHDTEELLRQSKERVLEMKIQLAKLQMTSLAFDQNE
WRHRMSLDLSDIDNVSARELKPRAQTVEQRRILRMLEKSLERELDLEKKLTLHKQNEDDL
KLKLRLTEQVALCMEEGAEVIWGRFLESENAAEVLMGISREMVSRLQVVNFNLNGSLQRE
KDFTLKIDNCIGQINAKDITIQNLNSNNKHLAVENTEVSSLRDKLKLSEDKLKESESKLL
KANELNEVSEERLKELECIVESQKEDIDIAEHKAESAEEKVAHLTETNLELHEELDFLKS
SNENNAKKVSILEKQVRELELQLQNAKTSSEAGQEQQNMLYTAIWDMETLIDELKQKVLK
AESKTEHVEEQCLILSETNLELTQEVEFLRSRVEGLETSLNQATVEKLASAKDINIKTSF
IMDLVMQLAIERERVQKQIFCLAKENKSLISKLKSTKEQPSINVLENGGDDIGLSSSRVA
STIAAATDSCRELQTESSQKSSQVINELPHDKTTDQSSKSSVLTNEEPNIVVKTEDTEVQ
LQAKQHQHRYIVMAVLVLLLSTLGLYFFDKRNDILEWLMVRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400050565
Transcript Infomation

pacid=37444007 locus=PGSC0003DMG400019651 ID=PGSC0003DMT400050565.v4.03 annot-version=v4.03
Sequence

ATGGCAATTGAAGAATTGGCTGTCCGTACTTCTGATATTGTCGATCCACAAGTAATGGAA
ACCTTGTTGATTGAAAATCACTCAAGTGAAGCCAAGGACATGGAAGAGATGAGGAGTTCT
ATGGAAAAGTTGAGTAGAGTAGATTTGGACCTTGCGTATTCTGATGAGAAGTTGACGAAT
CTTGACAATCTTTTGATGCGTGTTTTGGCCTGCGAAAATGAAGTTGAAGCAATATCTTTC
GAGAATGATGAGATTTCTCCTGAATCGATTGAGAAAGTACTGTCGTTGGATCACTTATCT
ATCATTTTAAACTCTGAGATAAGACTACTGGACAATTTCTTAGGCACTCTTCAAGACTTA
GTCATTGAAGCAAGGCAAAAGATACCTACGCGCAGAGAATTTAGTGAGCTACATGTGATA
ATGGAGAATAAATTTCATGATACTGAAGAGTTATTGAGACAATCGAAGGAACGTGTTCTA
GAAATGAAGATACAGCTTGCCAAATTGCAGATGACCTCGTTAGCTTTCGACCAAAATGAA
TGGAGACATAGGATGAGTTTGGATTTATCAGATATTGATAATGTTTCAGCAAGAGAATTG
AAGCCACGCGCACAGACAGTTGAGCAAAGACGTATATTAAGAATGTTGGAAAAATCACTC
GAAAGAGAGCTGGATCTCGAGAAGAAGTTGACTTTACATAAACAAAATGAAGATGATCTA
AAGTTGAAGCTCCGGTTAACCGAGCAAGTAGCTCTGTGCATGGAAGAGGGTGCAGAGGTT
ATATGGGGTAGGTTTTTAGAGTCGGAAAATGCAGCAGAGGTACTTATGGGAATTTCCAGA
GAGATGGTGAGCCGATTACAGGTTGTAAACTTCAATTTGAACGGTTCACTTCAACGAGAG
AAAGATTTCACGTTGAAGATTGATAATTGCATAGGACAGATAAATGCCAAAGATATTACC
ATACAAAACCTTAATAGCAACAACAAACATCTTGCTGTTGAAAATACTGAAGTATCCTCA
TTAAGGGACAAGCTAAAACTTTCAGAAGATAAGTTGAAAGAATCTGAGTCTAAGTTGCTG
AAAGCAAATGAACTGAATGAAGTAAGCGAAGAGCGTCTTAAAGAACTGGAATGTATCGTA
GAATCTCAGAAAGAAGACATCGATATTGCAGAACATAAGGCTGAAAGTGCAGAGGAAAAG
GTTGCACATTTGACTGAGACAAACTTGGAACTGCACGAGGAGTTGGATTTTCTCAAGAGT
AGTAATGAAAATAATGCTAAAAAGGTTAGCATTCTCGAGAAGCAGGTCAGGGAATTAGAA
CTTCAGCTACAAAATGCTAAGACATCATCCGAAGCAGGTCAAGAACAACAGAATATGTTG
TATACTGCCATTTGGGATATGGAAACTTTGATCGATGAACTAAAACAAAAGGTCTTAAAA
GCCGAAAGCAAGACTGAACATGTAGAGGAACAGTGCCTTATTTTGTCTGAAACTAATTTA
GAACTTACCCAAGAAGTGGAGTTTCTAAGATCAAGAGTCGAAGGATTGGAGACTTCGTTG
AATCAAGCTACTGTTGAGAAACTTGCAAGTGCAAAAGACATTAACATCAAAACCAGCTTT
ATAATGGATTTGGTCATGCAACTGGCTATCGAAAGAGAGCGAGTACAAAAACAGATTTTT
TGTTTGGCCAAGGAAAACAAATCATTGATCAGCAAGTTGAAGTCAACGAAGGAGCAACCG
TCCATAAATGTACTTGAGAATGGAGGTGATGATATTGGGTTGTCATCTTCTAGAGTTGCC
TCAACAATCGCTGCTGCTACAGACAGTTGTCGTGAATTGCAAACAGAATCCTCACAGAAA
AGCTCGCAGGTGATCAACGAATTACCTCATGATAAAACGACTGATCAAAGCAGTAAGTCC
TCCGTTTTGACAAATGAAGAGCCTAACATAGTTGTCAAGACAGAGGATACCGAGGTTCAG
CTACAAGCAAAGCAACATCAACACAGGTACATTGTCATGGCAGTCCTCGTCTTATTACTT
TCGACATTAGGATTATATTTTTTTGACAAAAGAAACGACATCCTCGAGTGGTTGATGGTT
AGATTATAG