Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050524
CDS Infomation

pacid=37467596 polypeptide=PGSC0003DMP400034113 locus=PGSC0003DMG400019634 ID=PGSC0003DMT400050524.v4.03 annot-version=v4.03
Sequence

ATGGCGGATACTGGAAAAGGAACAATTCTTCAATTTGCACCTTTTCAGAGTTTTGTAGAT
GAAGGGTTTTGGCATAAATTATCTTCTTTAAAGCTCAATAAATTGCGTCTTGATGAATCC
CCAATTCCAATTACTGGCTTTTATGCACCTTGCTCGCATCCTCAAGTATCAAATCACTTG
ACTCTCCTGGCTGAATCTTTGCCTGCTGATTCCGATGATGAACCATCGTCTCTTCTAGCT
AGTCAGGGGAATAGAAATAGGTGTCCTGTCCCTGGCGTTCTTCTCAACACAAACACGTTA
GAAAGTTTCTATGCGCTTGATAAGCAGAGCCTACTTAAGGCAGAAGCCAAGAAGATATGG
GATGACATTTACTCAGGGAAAGTTGAGGAGGACAGTTCTGTGCTCTTAAGATTCCTAGTT
ATATCATTTGCAGACTTGAAAAAGTGGAGCTTTCATTATTGGTTTGCGTTCCCTGCTTTG
GTGCTTGATCCTCCTGCAACTCTAGTTAATTTGAAACCAGCTTCCCAGTGCTTCACTTCC
GAAGAGGCTGAATCTGTGTCTAGTGCTTGTAATGAGTGGCGTAGCAAGAGCTCCACTGCA
GATATACCATTCTTTTTGGTGTCTATTGGTTCAAATTCAATTGCTACTCTCAGGCATCTA
AGGGAGTTGGAAACCTGCCAAAATAATGGTCAAAAGGTTCTTTTTGGTTTTTATGACCCT
TGTCATCTTCCGAATAATCCTGGATGGCCACTACGCAATTATCTTGCCTATATCTGTTCA
AGGTGGGGCCTTGGAAAGATTCACTTTTTCTGCTACCGCGAGAACCGTGGTTTTGCAGAT
CTGGGATTGTCCCTTGTTGGAGAAGCTGAAATATCTCTTTCACAAGGAGGAAGGAGTCAT
CAGAACATGCCCAATGTTGTGGGATGGGAACTAAATAAAGGGAAGAAGGGTTTGAGATGC
ATCAGCCTCGCTAAAACTATGGATCCGACGAGGTTAGCGGTATCAGCTGCTGATTTGAAC
TTGAAACTAATGAGATGGCGCACATTGCCGTCATTGAATCTAGAAATGTTGGCTTCCACG
AGATGTCTCCTTCTGGGAGCAGGTACCCTTGGATGCCAAGTTGCTCGAATGCTTATGGCA
TGGGGTGTCCGAAAAATTACATTGGTTGATAGTGGTAAGGTCTCAATGTCTAATCCAATA
AGGCAGTCTCTTTATGCGCTTGATGACTGTTTAAATGGTGGCAAATTTAAGGCCGTTGCA
GCAGTTGAAAGTCTCAAGCGAATATTTCCAGCAGTGGAAGCAGAAGGTGTTGTGATGGCT
ATTCCGATGCCTGGACATCCAGTGTCTAGCCAAGAAGAAAGTAGTATACTTCAGGACTGC
AGAGATTTGAGTGATTTGATCAACTCACATGATGCAATCTTTCTATTAACTGATACACGG
GAAAGTCGGTGGCTTCCTAGTCTACTTTGTGCTAGTGCTAACAAGATCGCTATTACTGCA
GCCTTAGGCTTCGATAGCTTTCTAGTGATGCGTCATGGAGCAGGCCCTTTGGATGCTCTA
CGAAACTCACAAGCTGAAACTTCGAGTAATGTCTCTGCCAGTATGGAGAATCTCTCCCTT
TCGAATCAAAATGAGTCAGTGCGATTGGGGTGTTACTTCTGCAATGATGTGGTTGCACCA
ATTGATTCAACGGCTAACCGTACCCTGGACCAACAATGTACAGTTACTCGTCCCGGGCTG
GCTCCTATTGCATCAGCCCTTGCTGTTGAACTTTTGGTTGGAGTCTTGCATCATCCTTCT
GGAATATGTGCCAAAGCTGAGTTTGCAAACTCTAATGATAACGGCAGCACTGAACAACCT
CTTGGCATTCTACCTCATCAGATTCGGGGCTCTATCTCTCAGTTTTCTCAGATGACACTT
GTCGGTCATGCTTCAACTTGTTGCACTGCTTGTTGTAGCACTGTTGTATCAGAATATCGA
ACGAAAGGGATGGACTTCATACTTCAAGCTATCAATCATCCTACATATCTGGAGGATCTA
ACTGGACTAACAGAACTCATGAAGTCAGCAGGATCTTACACGCTGGACTGGGATAACGAT
AGTGAAAATGATGACAACGACGATGATGATTGTGTAGAAATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400034113
PEP Infomation

pacid=37467596 transcript=PGSC0003DMT400050524 locus=PGSC0003DMG400019634 ID=PGSC0003DMT400050524.v4.03 annot-version=v4.03
Sequence

MADTGKGTILQFAPFQSFVDEGFWHKLSSLKLNKLRLDESPIPITGFYAPCSHPQVSNHL
TLLAESLPADSDDEPSSLLASQGNRNRCPVPGVLLNTNTLESFYALDKQSLLKAEAKKIW
DDIYSGKVEEDSSVLLRFLVISFADLKKWSFHYWFAFPALVLDPPATLVNLKPASQCFTS
EEAESVSSACNEWRSKSSTADIPFFLVSIGSNSIATLRHLRELETCQNNGQKVLFGFYDP
CHLPNNPGWPLRNYLAYICSRWGLGKIHFFCYRENRGFADLGLSLVGEAEISLSQGGRSH
QNMPNVVGWELNKGKKGLRCISLAKTMDPTRLAVSAADLNLKLMRWRTLPSLNLEMLAST
RCLLLGAGTLGCQVARMLMAWGVRKITLVDSGKVSMSNPIRQSLYALDDCLNGGKFKAVA
AVESLKRIFPAVEAEGVVMAIPMPGHPVSSQEESSILQDCRDLSDLINSHDAIFLLTDTR
ESRWLPSLLCASANKIAITAALGFDSFLVMRHGAGPLDALRNSQAETSSNVSASMENLSL
SNQNESVRLGCYFCNDVVAPIDSTANRTLDQQCTVTRPGLAPIASALAVELLVGVLHHPS
GICAKAEFANSNDNGSTEQPLGILPHQIRGSISQFSQMTLVGHASTCCTACCSTVVSEYR
TKGMDFILQAINHPTYLEDLTGLTELMKSAGSYTLDWDNDSENDDNDDDDCVEI*

Transcript Sequence

Transcript ID

PGSC0003DMT400050524
Transcript Infomation

pacid=37467596 locus=PGSC0003DMG400019634 ID=PGSC0003DMT400050524.v4.03 annot-version=v4.03
Sequence

ATGGCGGATACTGGAAAAGGAACAATTCTTCAATTTGCACCTTTTCAGAGTTTTGTAGAT
GAAGGGTTTTGGCATAAATTATCTTCTTTAAAGCTCAATAAATTGCGTCTTGATGAATCC
CCAATTCCAATTACTGGCTTTTATGCACCTTGCTCGCATCCTCAAGTATCAAATCACTTG
ACTCTCCTGGCTGAATCTTTGCCTGCTGATTCCGATGATGAACCATCGTCTCTTCTAGCT
AGTCAGGGGAATAGAAATAGGTGTCCTGTCCCTGGCGTTCTTCTCAACACAAACACGTTA
GAAAGTTTCTATGCGCTTGATAAGCAGAGCCTACTTAAGGCAGAAGCCAAGAAGATATGG
GATGACATTTACTCAGGGAAAGTTGAGGAGGACAGTTCTGTGCTCTTAAGATTCCTAGTT
ATATCATTTGCAGACTTGAAAAAGTGGAGCTTTCATTATTGGTTTGCGTTCCCTGCTTTG
GTGCTTGATCCTCCTGCAACTCTAGTTAATTTGAAACCAGCTTCCCAGTGCTTCACTTCC
GAAGAGGCTGAATCTGTGTCTAGTGCTTGTAATGAGTGGCGTAGCAAGAGCTCCACTGCA
GATATACCATTCTTTTTGGTGTCTATTGGTTCAAATTCAATTGCTACTCTCAGGCATCTA
AGGGAGTTGGAAACCTGCCAAAATAATGGTCAAAAGGTTCTTTTTGGTTTTTATGACCCT
TGTCATCTTCCGAATAATCCTGGATGGCCACTACGCAATTATCTTGCCTATATCTGTTCA
AGGTGGGGCCTTGGAAAGATTCACTTTTTCTGCTACCGCGAGAACCGTGGTTTTGCAGAT
CTGGGATTGTCCCTTGTTGGAGAAGCTGAAATATCTCTTTCACAAGGAGGAAGGAGTCAT
CAGAACATGCCCAATGTTGTGGGATGGGAACTAAATAAAGGGAAGAAGGGTTTGAGATGC
ATCAGCCTCGCTAAAACTATGGATCCGACGAGGTTAGCGGTATCAGCTGCTGATTTGAAC
TTGAAACTAATGAGATGGCGCACATTGCCGTCATTGAATCTAGAAATGTTGGCTTCCACG
AGATGTCTCCTTCTGGGAGCAGGTACCCTTGGATGCCAAGTTGCTCGAATGCTTATGGCA
TGGGGTGTCCGAAAAATTACATTGGTTGATAGTGGTAAGGTCTCAATGTCTAATCCAATA
AGGCAGTCTCTTTATGCGCTTGATGACTGTTTAAATGGTGGCAAATTTAAGGCCGTTGCA
GCAGTTGAAAGTCTCAAGCGAATATTTCCAGCAGTGGAAGCAGAAGGTGTTGTGATGGCT
ATTCCGATGCCTGGACATCCAGTGTCTAGCCAAGAAGAAAGTAGTATACTTCAGGACTGC
AGAGATTTGAGTGATTTGATCAACTCACATGATGCAATCTTTCTATTAACTGATACACGG
GAAAGTCGGTGGCTTCCTAGTCTACTTTGTGCTAGTGCTAACAAGATCGCTATTACTGCA
GCCTTAGGCTTCGATAGCTTTCTAGTGATGCGTCATGGAGCAGGCCCTTTGGATGCTCTA
CGAAACTCACAAGCTGAAACTTCGAGTAATGTCTCTGCCAGTATGGAGAATCTCTCCCTT
TCGAATCAAAATGAGTCAGTGCGATTGGGGTGTTACTTCTGCAATGATGTGGTTGCACCA
ATTGATTCAACGGCTAACCGTACCCTGGACCAACAATGTACAGTTACTCGTCCCGGGCTG
GCTCCTATTGCATCAGCCCTTGCTGTTGAACTTTTGGTTGGAGTCTTGCATCATCCTTCT
GGAATATGTGCCAAAGCTGAGTTTGCAAACTCTAATGATAACGGCAGCACTGAACAACCT
CTTGGCATTCTACCTCATCAGATTCGGGGCTCTATCTCTCAGTTTTCTCAGATGACACTT
GTCGGTCATGCTTCAACTTGTTGCACTGCTTGTTGTAGCACTGTTGTATCAGAATATCGA
ACGAAAGGGATGGACTTCATACTTCAAGCTATCAATCATCCTACATATCTGGAGGATCTA
ACTGGACTAACAGAACTCATGAAGTCAGCAGGATCTTACACGCTGGACTGGGATAACGAT
AGTGAAAATGATGACAACGACGATGATGATTGTGTAGAAATATAA