Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050522
CDS Infomation

pacid=37467144 polypeptide=PGSC0003DMP400034111 locus=PGSC0003DMG400019633 ID=PGSC0003DMT400050522.v4.03 annot-version=v4.03
Sequence

ATGGAAATGGAGAACAAAGATGTTGCTATGGAGAAAACCGATGCCGTTCCGATCGAATTA
CCTGCTCCTCCTGGCTGGAAGAAGAGATTCACTCCAGGAAAGAGCAGTACCCCTAGAAGG
AATGATATTATATTTGTTTCACCTGATGGAGACGAAATTAAGAACAAGAGGCAATTGGAC
AAGTATCTGAAATCACATCCAGGAGGACCTCCTGCTTCTGAATTTAATTGGGGTACAGGT
GACACTCCTAGACGATCAACTAGATTGGGTGGAAAATCTAAAGCAACGGAGACACCAGAA
ACTGATACTCCCAGTACGAAGAGACAAAGGAAATCAAGTTCCAAAAAAGAAGCCAAGGAG
GATGGTGGCGCACGAGAAGCTGAGGGTGCTACTGAGAAAGAAGCTAAGGCAAGTGATGAA
CCTGCTTTGCCTGATGCAGAGGATCTAGAAGTCCAAGATGTAGAGATGGCATCTAAGAAT
CTCACCGATGGAGATAACATAAAGGATGAGAAGGAGAAGACCAATGATGGTGAGATTGTC
CCCAAGGAGCCTCAGGCAAGTGAAGATAAGATGGAAATTGTGCATGAAAAAGAAGAAACA
AAGGATGAGAAGGAGAAGATCAGTGATGGTGAGATTGTCCCCGAGGAGCCTCTGGTAAGT
GAAGATAAGATGGAAATTGTGCAAGAAAAAGAAGAAACAAAGGATGAGGAGGAGAAGACC
AATGCTTGTGAGATTGTCCCTGAGGAGCCTCCGGAAAGTGAAGATAAGATGGAAATTGTG
CAAGAAAAAGAAGAAACAAAGGATGAGGAGGAGAAGACCAATGCTGGTGAGATTGTCCCT
GAGGAGCCTCCGGAAAGTGAAGATAAGATGGAAATTGTGCAAGAAAAAGAAGAAACAAAG
GATGAGGAGGAGAAGACCAATGCTGGTGAGATTGTCCCTGAGGAGCCTCCGGAAAGTGAA
GATAAGATGGAAATTGTGCAAGAAAAAGAAGAAACAAAGGATGAGGAGGAGAAGACCAAT
GCTGGTGAGATTGTCCCTGAGGAGCCTCCGGAAAGTGAAGATAAGATGGAAATTGTGCAA
GAAAAAGAAGAAACATTGGATGAGGGAAACATAGAGAAAATGAAAAATCGAGAAGCGGAA
GATAAGCCTCTGGATAACAGCCTTAAAACTGACAATAAAACGCTTCCATTGAATGTGTTT
GAAGAAAATAAGATTGAGAGTAAACCAGCTGGGACAGATGCCTCATCTCTTTCTGCTGAA
CTCAGCAAGGCAAGCTCAGGTAGCCCAGAAGAAATTGCAGAAGAAGCTCCTGCCGCTGAA
GATGCACTGGATGTGGTCGATGAAAATAAGATAGAGAGTAAACCAGCTGGGGCAGATGCC
TCATCTCATTCTGCTGAACTCAGCAAGGCAACCTCAGTTAGCCAAGAAGAAGCTCCAGCC
GCTGCAGATCCACTGGTTCAGAATTCTAATGATGGTAAAGTACACGAAAACGAGCAGATT
GACAGGGAGATTCCAATTGAGGAGATCATTGGCACAGAATCAGCTGCAGCAGGTGTTAAC
AGTTCCGTGCAGCAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400034111
PEP Infomation

pacid=37467144 transcript=PGSC0003DMT400050522 locus=PGSC0003DMG400019633 ID=PGSC0003DMT400050522.v4.03 annot-version=v4.03
Sequence

MEMENKDVAMEKTDAVPIELPAPPGWKKRFTPGKSSTPRRNDIIFVSPDGDEIKNKRQLD
KYLKSHPGGPPASEFNWGTGDTPRRSTRLGGKSKATETPETDTPSTKRQRKSSSKKEAKE
DGGAREAEGATEKEAKASDEPALPDAEDLEVQDVEMASKNLTDGDNIKDEKEKTNDGEIV
PKEPQASEDKMEIVHEKEETKDEKEKISDGEIVPEEPLVSEDKMEIVQEKEETKDEEEKT
NACEIVPEEPPESEDKMEIVQEKEETKDEEEKTNAGEIVPEEPPESEDKMEIVQEKEETK
DEEEKTNAGEIVPEEPPESEDKMEIVQEKEETKDEEEKTNAGEIVPEEPPESEDKMEIVQ
EKEETLDEGNIEKMKNREAEDKPLDNSLKTDNKTLPLNVFEENKIESKPAGTDASSLSAE
LSKASSGSPEEIAEEAPAAEDALDVVDENKIESKPAGADASSHSAELSKATSVSQEEAPA
AADPLVQNSNDGKVHENEQIDREIPIEEIIGTESAAAGVNSSVQQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400050522
Transcript Infomation

pacid=37467144 locus=PGSC0003DMG400019633 ID=PGSC0003DMT400050522.v4.03 annot-version=v4.03
Sequence

ATGGAAATGGAGAACAAAGATGTTGCTATGGAGAAAACCGATGCCGTTCCGATCGAATTA
CCTGCTCCTCCTGGCTGGAAGAAGAGATTCACTCCAGGAAAGAGCAGTACCCCTAGAAGG
AATGATATTATATTTGTTTCACCTGATGGAGACGAAATTAAGAACAAGAGGCAATTGGAC
AAGTATCTGAAATCACATCCAGGAGGACCTCCTGCTTCTGAATTTAATTGGGGTACAGGT
GACACTCCTAGACGATCAACTAGATTGGGTGGAAAATCTAAAGCAACGGAGACACCAGAA
ACTGATACTCCCAGTACGAAGAGACAAAGGAAATCAAGTTCCAAAAAAGAAGCCAAGGAG
GATGGTGGCGCACGAGAAGCTGAGGGTGCTACTGAGAAAGAAGCTAAGGCAAGTGATGAA
CCTGCTTTGCCTGATGCAGAGGATCTAGAAGTCCAAGATGTAGAGATGGCATCTAAGAAT
CTCACCGATGGAGATAACATAAAGGATGAGAAGGAGAAGACCAATGATGGTGAGATTGTC
CCCAAGGAGCCTCAGGCAAGTGAAGATAAGATGGAAATTGTGCATGAAAAAGAAGAAACA
AAGGATGAGAAGGAGAAGATCAGTGATGGTGAGATTGTCCCCGAGGAGCCTCTGGTAAGT
GAAGATAAGATGGAAATTGTGCAAGAAAAAGAAGAAACAAAGGATGAGGAGGAGAAGACC
AATGCTTGTGAGATTGTCCCTGAGGAGCCTCCGGAAAGTGAAGATAAGATGGAAATTGTG
CAAGAAAAAGAAGAAACAAAGGATGAGGAGGAGAAGACCAATGCTGGTGAGATTGTCCCT
GAGGAGCCTCCGGAAAGTGAAGATAAGATGGAAATTGTGCAAGAAAAAGAAGAAACAAAG
GATGAGGAGGAGAAGACCAATGCTGGTGAGATTGTCCCTGAGGAGCCTCCGGAAAGTGAA
GATAAGATGGAAATTGTGCAAGAAAAAGAAGAAACAAAGGATGAGGAGGAGAAGACCAAT
GCTGGTGAGATTGTCCCTGAGGAGCCTCCGGAAAGTGAAGATAAGATGGAAATTGTGCAA
GAAAAAGAAGAAACATTGGATGAGGGAAACATAGAGAAAATGAAAAATCGAGAAGCGGAA
GATAAGCCTCTGGATAACAGCCTTAAAACTGACAATAAAACGCTTCCATTGAATGTGTTT
GAAGAAAATAAGATTGAGAGTAAACCAGCTGGGACAGATGCCTCATCTCTTTCTGCTGAA
CTCAGCAAGGCAAGCTCAGGTAGCCCAGAAGAAATTGCAGAAGAAGCTCCTGCCGCTGAA
GATGCACTGGATGTGGTCGATGAAAATAAGATAGAGAGTAAACCAGCTGGGGCAGATGCC
TCATCTCATTCTGCTGAACTCAGCAAGGCAACCTCAGTTAGCCAAGAAGAAGCTCCAGCC
GCTGCAGATCCACTGGTTCAGAATTCTAATGATGGTAAAGTACACGAAAACGAGCAGATT
GACAGGGAGATTCCAATTGAGGAGATCATTGGCACAGAATCAGCTGCAGCAGGTGTTAAC
AGTTCCGTGCAGCAATAA