Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050515
CDS Infomation

pacid=37466160 polypeptide=PGSC0003DMP400034104 locus=PGSC0003DMG400019629 ID=PGSC0003DMT400050515.v4.03 annot-version=v4.03
Sequence

ATGAAACCCCAACAGCAGCAGCAGCAGCAACAATCTTTGAAGCGTCAGCTTCAGTTTTCG
TCGATTAAACCGGTGTTTGGTGACTACCACCGGTTTTCCACAGAACCAGTTGATTGTTCC
TCTCAAGAACCCCCTGGAATTGTTGTGAAGACTCCGCCACTGAAGCGGAAGAGTGCAGCA
GCAAATTATGGACAGGGGGTTGGTGACCGGAATCCAGCTTCTGGATATGCTAATGTCAAC
AGTCCCATACAGACACCAGTATCTGGAAAAAATGCACAGAAAGTTCCTAGGACTTCAAAG
GCCAGATCTGCTTCTCAAGCTGTTACCTCCAATGTTGGATCCCCTTCAGGCAATAATGTT
ACTCCTGTTGGTCCTTGTCGATATGATAGCTCCCTGGGTCTTCTAACGAAGAAGTTCATC
AATCTAATCAAACATGCAGAAGACGGTATGCTTGATCTAAATAAAGCTGCTGATACATTA
GAGGTGCAGAAAAGGCGTATATATGACATCACAAATGTCCTGGAAGGCATTGGGCTGATA
GAAAAGAAACTCAAGAACAGGATCCAGTGGAAGGGTCAAGGTGTCTCGAAACCAGGAGAA
GCTGACGAGAGTGTTGCAAGTTTACAGGCAGAAGTGGAAAAGTTGACGGTTGAAGAGCAT
AGATTAGATGACCAGATAAGAGAAATGCAGGAAAGTTTAAGGGACCTGAGTGAAGATGAA
AATAATCAAAGATGGCTTTTCGTCACTGAAGATGATATCAAGAGCTTACCTTGTTTCCAG
AATGAAACATTGATAGCAATTAAAGCTCCACATGGTACCACTTTAGAAGTTCCAGACCCT
GACGAGGCTGTTGATTATCCACAAAGGAGATACAGAATAGTGTTACGGAGCACGATGGGC
CCCATTGATGTTTACCTAGTCAGTCAATTTGAGGAGAAGTTTGAGGAGGTAAATGCTGTT
GAGGCACCCCCAAGTGTGCCTTCAACGTCTGGTCTGAATGAGAAGGCAACTGCAACATTG
GCTACCGAGGAGAATGAAGAAGTTGATATTGGCATGGAGGGAAAAGAAAATCAAAATGTG
CGCTCAGAAGTTGGTACTTCACAGGACTTTATGACTGGAATCATGAAGATTGTTCCAGAT
GTTGATAACGAAGCAGATTACTGGCTTTTGTCAGATGCAGATGTTAGCATCACTGACATG
TGGAGGACAGAATCTGCTATTGACTGGAACGAGTTGGATGTAATTCAAGAAGATTATTCA
ATCGCTAATGTCAGTACCCCAAGAGCCCAAACTCCACCACCCGCCACAACTGAAGTACCT
TCTGCTGCTAACACTTACGGGTGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400034104
PEP Infomation

pacid=37466160 transcript=PGSC0003DMT400050515 locus=PGSC0003DMG400019629 ID=PGSC0003DMT400050515.v4.03 annot-version=v4.03
Sequence

MKPQQQQQQQQSLKRQLQFSSIKPVFGDYHRFSTEPVDCSSQEPPGIVVKTPPLKRKSAA
ANYGQGVGDRNPASGYANVNSPIQTPVSGKNAQKVPRTSKARSASQAVTSNVGSPSGNNV
TPVGPCRYDSSLGLLTKKFINLIKHAEDGMLDLNKAADTLEVQKRRIYDITNVLEGIGLI
EKKLKNRIQWKGQGVSKPGEADESVASLQAEVEKLTVEEHRLDDQIREMQESLRDLSEDE
NNQRWLFVTEDDIKSLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMG
PIDVYLVSQFEEKFEEVNAVEAPPSVPSTSGLNEKATATLATEENEEVDIGMEGKENQNV
RSEVGTSQDFMTGIMKIVPDVDNEADYWLLSDADVSITDMWRTESAIDWNELDVIQEDYS
IANVSTPRAQTPPPATTEVPSAANTYGC*

Transcript Sequence

Transcript ID

PGSC0003DMT400050515
Transcript Infomation

pacid=37466160 locus=PGSC0003DMG400019629 ID=PGSC0003DMT400050515.v4.03 annot-version=v4.03
Sequence

ATGAAACCCCAACAGCAGCAGCAGCAGCAACAATCTTTGAAGCGTCAGCTTCAGTTTTCG
TCGATTAAACCGGTGTTTGGTGACTACCACCGGTTTTCCACAGAACCAGTTGATTGTTCC
TCTCAAGAACCCCCTGGAATTGTTGTGAAGACTCCGCCACTGAAGCGGAAGAGTGCAGCA
GCAAATTATGGACAGGGGGTTGGTGACCGGAATCCAGCTTCTGGATATGCTAATGTCAAC
AGTCCCATACAGACACCAGTATCTGGAAAAAATGCACAGAAAGTTCCTAGGACTTCAAAG
GCCAGATCTGCTTCTCAAGCTGTTACCTCCAATGTTGGATCCCCTTCAGGCAATAATGTT
ACTCCTGTTGGTCCTTGTCGATATGATAGCTCCCTGGGTCTTCTAACGAAGAAGTTCATC
AATCTAATCAAACATGCAGAAGACGGTATGCTTGATCTAAATAAAGCTGCTGATACATTA
GAGGTGCAGAAAAGGCGTATATATGACATCACAAATGTCCTGGAAGGCATTGGGCTGATA
GAAAAGAAACTCAAGAACAGGATCCAGTGGAAGGGTCAAGGTGTCTCGAAACCAGGAGAA
GCTGACGAGAGTGTTGCAAGTTTACAGGCAGAAGTGGAAAAGTTGACGGTTGAAGAGCAT
AGATTAGATGACCAGATAAGAGAAATGCAGGAAAGTTTAAGGGACCTGAGTGAAGATGAA
AATAATCAAAGATGGCTTTTCGTCACTGAAGATGATATCAAGAGCTTACCTTGTTTCCAG
AATGAAACATTGATAGCAATTAAAGCTCCACATGGTACCACTTTAGAAGTTCCAGACCCT
GACGAGGCTGTTGATTATCCACAAAGGAGATACAGAATAGTGTTACGGAGCACGATGGGC
CCCATTGATGTTTACCTAGTCAGTCAATTTGAGGAGAAGTTTGAGGAGGTAAATGCTGTT
GAGGCACCCCCAAGTGTGCCTTCAACGTCTGGTCTGAATGAGAAGGCAACTGCAACATTG
GCTACCGAGGAGAATGAAGAAGTTGATATTGGCATGGAGGGAAAAGAAAATCAAAATGTG
CGCTCAGAAGTTGGTACTTCACAGGACTTTATGACTGGAATCATGAAGATTGTTCCAGAT
GTTGATAACGAAGCAGATTACTGGCTTTTGTCAGATGCAGATGTTAGCATCACTGACATG
TGGAGGACAGAATCTGCTATTGACTGGAACGAGTTGGATGTAATTCAAGAAGATTATTCA
ATCGCTAATGTCAGTACCCCAAGAGCCCAAACTCCACCACCCGCCACAACTGAAGTACCT
TCTGCTGCTAACACTTACGGGTGCTAA