Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050487
CDS Infomation

pacid=37467432 polypeptide=PGSC0003DMP400034083 locus=PGSC0003DMG400019618 ID=PGSC0003DMT400050487.v4.03 annot-version=v4.03
Sequence

ATGGCTGTTGAAATTGTTGATTCGGATGAAAACCCGATTAAGATCCGGGAAGTTTGGTCG
GATAATCTGGAATCGGAGTTTGAGCTTATACGAACAGCAATTGATCAGTACCCATTCATC
TCAATGGATACTGAGTTTCCGGGAGTAATTTATAAGCCGGAGGTTATTTCTTCCCGGCAA
AATCGCCGGCGTTATGTGCCGCTGTTACCATCGGAGCATTACAAGATGTTGAAATCAAAC
GTCGACGTTTTGAACATCATTCAGGTAGGACTTACATTGTCTGACTCCGATGGGAACTTA
CCGGATCTGGGTACCGCCGGTGTTAATCGATACATCTGGCAGTTCAACTTCTCCGATTTC
GACGTGGCGCGTGATCGACACGCTCCGGACTCAATCGAGCTACTCCGGCGTCACGGCATC
GATTTCGAGAAGAACAAGGTGATCGGAATCGATTCTTGTCGTTTCGCCGAGCTGATGATG
TCGTCTGGGCTTGTATGCAACGAAACCGTAAGCTGGGTTACGTTCCACAGCGCTTACGAT
TTCGCATACCTCGTAAAAATCCTCACCCGCCGGGAACTTCCCGGCGAGTTAGAGGATTTT
CTGGAAGTTTTCAAGGTGTTTTTCGGTAATAATGTTTATGATGTGAAGCATTTGATGAGG
TTTTGTGAGAAACTCTATGGCGGTTTAGACCGGATTGCGAAGGTGTTAGAGGTGAACCGG
GCGGTCGGGAAGTGTCATCAGGCCGGTTCAGATAGTTTGTTGACGTGGCACGCTTTTCAA
AAAATGAGGGACGTGTACTTTGTAAATGACGGACCGGAGAAATACGCCGGCGTTTTGTTT
GGATTAGAAGTGTATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400034083
PEP Infomation

pacid=37467432 transcript=PGSC0003DMT400050487 locus=PGSC0003DMG400019618 ID=PGSC0003DMT400050487.v4.03 annot-version=v4.03
Sequence

MAVEIVDSDENPIKIREVWSDNLESEFELIRTAIDQYPFISMDTEFPGVIYKPEVISSRQ
NRRRYVPLLPSEHYKMLKSNVDVLNIIQVGLTLSDSDGNLPDLGTAGVNRYIWQFNFSDF
DVARDRHAPDSIELLRRHGIDFEKNKVIGIDSCRFAELMMSSGLVCNETVSWVTFHSAYD
FAYLVKILTRRELPGELEDFLEVFKVFFGNNVYDVKHLMRFCEKLYGGLDRIAKVLEVNR
AVGKCHQAGSDSLLTWHAFQKMRDVYFVNDGPEKYAGVLFGLEVY*

Transcript Sequence

Transcript ID

PGSC0003DMT400050487
Transcript Infomation

pacid=37467432 locus=PGSC0003DMG400019618 ID=PGSC0003DMT400050487.v4.03 annot-version=v4.03
Sequence

ATGGCTGTTGAAATTGTTGATTCGGATGAAAACCCGATTAAGATCCGGGAAGTTTGGTCG
GATAATCTGGAATCGGAGTTTGAGCTTATACGAACAGCAATTGATCAGTACCCATTCATC
TCAATGGATACTGAGTTTCCGGGAGTAATTTATAAGCCGGAGGTTATTTCTTCCCGGCAA
AATCGCCGGCGTTATGTGCCGCTGTTACCATCGGAGCATTACAAGATGTTGAAATCAAAC
GTCGACGTTTTGAACATCATTCAGGTAGGACTTACATTGTCTGACTCCGATGGGAACTTA
CCGGATCTGGGTACCGCCGGTGTTAATCGATACATCTGGCAGTTCAACTTCTCCGATTTC
GACGTGGCGCGTGATCGACACGCTCCGGACTCAATCGAGCTACTCCGGCGTCACGGCATC
GATTTCGAGAAGAACAAGGTGATCGGAATCGATTCTTGTCGTTTCGCCGAGCTGATGATG
TCGTCTGGGCTTGTATGCAACGAAACCGTAAGCTGGGTTACGTTCCACAGCGCTTACGAT
TTCGCATACCTCGTAAAAATCCTCACCCGCCGGGAACTTCCCGGCGAGTTAGAGGATTTT
CTGGAAGTTTTCAAGGTGTTTTTCGGTAATAATGTTTATGATGTGAAGCATTTGATGAGG
TTTTGTGAGAAACTCTATGGCGGTTTAGACCGGATTGCGAAGGTGTTAGAGGTGAACCGG
GCGGTCGGGAAGTGTCATCAGGCCGGTTCAGATAGTTTGTTGACGTGGCACGCTTTTCAA
AAAATGAGGGACGTGTACTTTGTAAATGACGGACCGGAGAAATACGCCGGCGTTTTGTTT
GGATTAGAAGTGTATTAA