Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050477
CDS Infomation

pacid=37451603 polypeptide=PGSC0003DMP400034075 locus=PGSC0003DMG400019612 ID=PGSC0003DMT400050477.v4.03 annot-version=v4.03
Sequence

ATGGATCACCGACAAGAGGAGTTCTCGAGATTTCAGGGCTGGAAATCAGAGAAAAACTCT
GAAGGAAATTTTCATGCTATGGGTGGAGTGCACCGAAGTAAAGTTGTAATAGCTTCCAAC
GAATTAAATAAAGGCTTGGAACCTGGTAAATGGAGGGCCAAAAGCATAATTCAAGCCGTA
AAATCCAGTTTAAGTGGTTTTGTGGAAGAAAGCTTGGGATCCAACAAGAACATACTTGAT
CCTCAAGGACCTTTTCTTCAAAAGTGGAACAAAATATTTGTATTATCGTGTGTAATAGCA
ATCTCCTTGGATCCTTTGTTCCTTTACATTCCATTGATTGATAATGACAACAAATGTCTG
GGGTTAGACAGAACATTAGAGGTTACAGCCAGTGTTTTGCGTTCTTTTACTGATATATTT
TACTTTCTTCATATTGCCCTTCAATTTCGAACTGGTTTCATTGCTCCTTCTTCACGTGTA
TTTGGAAGAGGTGTTTTAGTTGAAGATGCTTGGGAGATAGCAAAGAGATACTTGTCCACG
TACTTCTTGATTGATATTCTTGCAGTTCTACCACTACCACAGGTTGTAATTTTAATTATT
ATCCCTAAGTTGCGGGGTGCAAGATCTTTGAATACCAAGAATTTGCTGAAGTCTGTTGTC
TTTTTCCAATATATTCCGAGGGTCCTTCGCGTTTATCCTTTATATAAGGAAGTCACAAGA
ACATCTGGCATACTCACTGAAACAGCATGGGCTGGAGCTGCTTTCAATCTCTTCCTTTAT
ATGCTTGCCAGCCATGTACTTGGAGCCTTTTGGTATCTGTTTTCTATAGAACGTGAAACT
ACTTGCTGGAAACAAGCTTGTGCAAATTCCTCTGTCTGTCGTCATGCCTCGTTGTATTGT
GATGATGATCATACAGGATTTAAAACGTTGCTGAATATTTCCTGCCCTATAGAGACACCA
AACACAACACTCTTTGATTTTGGGATGTTCCTTGACGCTCTCCAATCAGATGTTGTGGGA
TCAATGAATTTTCCACAGAAGTTCTTTTATTGTTTCTGGTGGGGTTTACAAAACTTAAGT
TCCCTTGGTCAAAACCTCCAAACAAGTACCTATGTATGGGAAATTTGCTTTGCAGTTTTC
ATTTCCATCTCCGGCCTGGTGCTATTTGCCTTTCTCATCGGAAATATGCAGACATGTTTG
CAGTCCTCAACAATGAGACTAGAGGAGATGAGGGTGAAAAGGCGAGATGCAGAACAGTGG
ATGTCACATCGGCTACTCCCTGAGAACCTCAGAGAGCGAATTAGGCGCTATGAGCAATAC
AAGTGGCAGGAAACAAGGGGTGTTGAGGAAGAAAATCTGATTCACAACCTTCCTAAAGAC
CTCAGAAGAGATATAAAGCGCCATCTTTGTTTAGCTTTACTGATGAGAGTGCCAATGTTT
GAAAAAATGGACGAACAACTCTTGGATGCACTATGTGACCGACTCAAGCCAGTGCTCTAC
ACCGAGGACAGCTACATTGTTCGTGAAGGTGACCCAGTTAATGAGATGCTGTTTGTAATG
AGGGGCAAACTACAGTCTGTAACCACTAATGGAGGGAGGACAGGTTTTTTCAACTCCGAG
TATCTAAAAGCTGGTGATTTTTGTGGAGAGGAGCTTCTTACTTGGGCTCTTGACCCTCAT
TCATCAACTAACTTACCTATCTCAACCCGAACTGCACAAGCACTCTCAGAAGTTGAAGCA
TTTGCTTTAGTGGCTGATGATTTGAAGTTTGTGGCCTCTCAATTTCGAAGACTTCACAGT
AAGCAGCTCCGCCATACTTTCAGGTTTTACTCAGGTCATTGGAGAACTTGGGCAGCTTGC
TTTTTACAAGCAGCATGGCGCAATTATTGCAGGAAGAAGGTAGAAGAATCTCTTCATGTA
GAAGAAAGCAGATTGCAAGATGCATTAGCAAAGGAAGGTTCCAGTTCACCAAGTTTTGGT
GCTACCATCTATGCATCAAGATTTGCTGCTAATGCACTTCGCGCTCTGCGACGCAATAAA
GCAAATAAAGCAAGAGTGCCAGACAGGATAACACCCCTTCTGCTTCAGAAACCAACAGAG
CCAGATTTTACTGCTGAAGATAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400034075
PEP Infomation

pacid=37451603 transcript=PGSC0003DMT400050477 locus=PGSC0003DMG400019612 ID=PGSC0003DMT400050477.v4.03 annot-version=v4.03
Sequence

MDHRQEEFSRFQGWKSEKNSEGNFHAMGGVHRSKVVIASNELNKGLEPGKWRAKSIIQAV
KSSLSGFVEESLGSNKNILDPQGPFLQKWNKIFVLSCVIAISLDPLFLYIPLIDNDNKCL
GLDRTLEVTASVLRSFTDIFYFLHIALQFRTGFIAPSSRVFGRGVLVEDAWEIAKRYLST
YFLIDILAVLPLPQVVILIIIPKLRGARSLNTKNLLKSVVFFQYIPRVLRVYPLYKEVTR
TSGILTETAWAGAAFNLFLYMLASHVLGAFWYLFSIERETTCWKQACANSSVCRHASLYC
DDDHTGFKTLLNISCPIETPNTTLFDFGMFLDALQSDVVGSMNFPQKFFYCFWWGLQNLS
SLGQNLQTSTYVWEICFAVFISISGLVLFAFLIGNMQTCLQSSTMRLEEMRVKRRDAEQW
MSHRLLPENLRERIRRYEQYKWQETRGVEEENLIHNLPKDLRRDIKRHLCLALLMRVPMF
EKMDEQLLDALCDRLKPVLYTEDSYIVREGDPVNEMLFVMRGKLQSVTTNGGRTGFFNSE
YLKAGDFCGEELLTWALDPHSSTNLPISTRTAQALSEVEAFALVADDLKFVASQFRRLHS
KQLRHTFRFYSGHWRTWAACFLQAAWRNYCRKKVEESLHVEESRLQDALAKEGSSSPSFG
ATIYASRFAANALRALRRNKANKARVPDRITPLLLQKPTEPDFTAEDK*

Transcript Sequence

Transcript ID

PGSC0003DMT400050477
Transcript Infomation

pacid=37451603 locus=PGSC0003DMG400019612 ID=PGSC0003DMT400050477.v4.03 annot-version=v4.03
Sequence

ATGGATCACCGACAAGAGGAGTTCTCGAGATTTCAGGGCTGGAAATCAGAGAAAAACTCT
GAAGGAAATTTTCATGCTATGGGTGGAGTGCACCGAAGTAAAGTTGTAATAGCTTCCAAC
GAATTAAATAAAGGCTTGGAACCTGGTAAATGGAGGGCCAAAAGCATAATTCAAGCCGTA
AAATCCAGTTTAAGTGGTTTTGTGGAAGAAAGCTTGGGATCCAACAAGAACATACTTGAT
CCTCAAGGACCTTTTCTTCAAAAGTGGAACAAAATATTTGTATTATCGTGTGTAATAGCA
ATCTCCTTGGATCCTTTGTTCCTTTACATTCCATTGATTGATAATGACAACAAATGTCTG
GGGTTAGACAGAACATTAGAGGTTACAGCCAGTGTTTTGCGTTCTTTTACTGATATATTT
TACTTTCTTCATATTGCCCTTCAATTTCGAACTGGTTTCATTGCTCCTTCTTCACGTGTA
TTTGGAAGAGGTGTTTTAGTTGAAGATGCTTGGGAGATAGCAAAGAGATACTTGTCCACG
TACTTCTTGATTGATATTCTTGCAGTTCTACCACTACCACAGGTTGTAATTTTAATTATT
ATCCCTAAGTTGCGGGGTGCAAGATCTTTGAATACCAAGAATTTGCTGAAGTCTGTTGTC
TTTTTCCAATATATTCCGAGGGTCCTTCGCGTTTATCCTTTATATAAGGAAGTCACAAGA
ACATCTGGCATACTCACTGAAACAGCATGGGCTGGAGCTGCTTTCAATCTCTTCCTTTAT
ATGCTTGCCAGCCATGTACTTGGAGCCTTTTGGTATCTGTTTTCTATAGAACGTGAAACT
ACTTGCTGGAAACAAGCTTGTGCAAATTCCTCTGTCTGTCGTCATGCCTCGTTGTATTGT
GATGATGATCATACAGGATTTAAAACGTTGCTGAATATTTCCTGCCCTATAGAGACACCA
AACACAACACTCTTTGATTTTGGGATGTTCCTTGACGCTCTCCAATCAGATGTTGTGGGA
TCAATGAATTTTCCACAGAAGTTCTTTTATTGTTTCTGGTGGGGTTTACAAAACTTAAGT
TCCCTTGGTCAAAACCTCCAAACAAGTACCTATGTATGGGAAATTTGCTTTGCAGTTTTC
ATTTCCATCTCCGGCCTGGTGCTATTTGCCTTTCTCATCGGAAATATGCAGACATGTTTG
CAGTCCTCAACAATGAGACTAGAGGAGATGAGGGTGAAAAGGCGAGATGCAGAACAGTGG
ATGTCACATCGGCTACTCCCTGAGAACCTCAGAGAGCGAATTAGGCGCTATGAGCAATAC
AAGTGGCAGGAAACAAGGGGTGTTGAGGAAGAAAATCTGATTCACAACCTTCCTAAAGAC
CTCAGAAGAGATATAAAGCGCCATCTTTGTTTAGCTTTACTGATGAGAGTGCCAATGTTT
GAAAAAATGGACGAACAACTCTTGGATGCACTATGTGACCGACTCAAGCCAGTGCTCTAC
ACCGAGGACAGCTACATTGTTCGTGAAGGTGACCCAGTTAATGAGATGCTGTTTGTAATG
AGGGGCAAACTACAGTCTGTAACCACTAATGGAGGGAGGACAGGTTTTTTCAACTCCGAG
TATCTAAAAGCTGGTGATTTTTGTGGAGAGGAGCTTCTTACTTGGGCTCTTGACCCTCAT
TCATCAACTAACTTACCTATCTCAACCCGAACTGCACAAGCACTCTCAGAAGTTGAAGCA
TTTGCTTTAGTGGCTGATGATTTGAAGTTTGTGGCCTCTCAATTTCGAAGACTTCACAGT
AAGCAGCTCCGCCATACTTTCAGGTTTTACTCAGGTCATTGGAGAACTTGGGCAGCTTGC
TTTTTACAAGCAGCATGGCGCAATTATTGCAGGAAGAAGGTAGAAGAATCTCTTCATGTA
GAAGAAAGCAGATTGCAAGATGCATTAGCAAAGGAAGGTTCCAGTTCACCAAGTTTTGGT
GCTACCATCTATGCATCAAGATTTGCTGCTAATGCACTTCGCGCTCTGCGACGCAATAAA
GCAAATAAAGCAAGAGTGCCAGACAGGATAACACCCCTTCTGCTTCAGAAACCAACAGAG
CCAGATTTTACTGCTGAAGATAAATAA