Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050474
CDS Infomation

pacid=37454076 polypeptide=PGSC0003DMP400034073 locus=PGSC0003DMG400019611 ID=PGSC0003DMT400050474.v4.03 annot-version=v4.03
Sequence

ATGGACTACGCCAGGCTTGGAAAACCCAAGCCTAAAGATCTCTCACGCCGAGAAATACTG
CCAAAATTTGAAGAGAATGCGCCCAATCAAAGGTCCAAACTCAAAATTGTACTCATTTTC
TCTAGCATTCTTATAATTGCTTCTGCAATTTCTGCAGCAGTTGTGGTAACTGTGCGGAGT
ACTACTAAAACGGGTGCCACAGTGCGTCATATAAAGCCCAGTCAGGCAATTTCACGAACA
TGTAGTCGAACTCGCTTCCCAACACTCTGTTTAAACTCTTTACATGAATTCCCCGGCGCA
CTCACCGCTTCCGACGCCGAACTCGTCCACATTTCCGTCAATGCGACGCTTCAGCGTTTT
GGCAGGGCGTTTTACATGGCGTCCGATATTAACAGCCTTGTCATGGATAAGCGTACAAGG
TCCGCTTACGAGAGTTGCCTTGAGCTGTTAGAAGATTCTGTTTACCTTCTATCCCGATCC
TTAACCTCCGTTGCTCCCGGCGCCGGAAAATCACCGCCGGGAAACAATAACGACGTGCAG
ACGTGGCTGAGCGCTGCGCTCACCAACCAGGACACGTGTACGGAAGGTTTCGCTGATGTT
AGCGGGAACGTGAAGGATCAGATGGCGACAAATTTGAAGGATTTGTCTCAATTGGTGAGC
AATTGCTTAGCCATTTTCGCTGCCGTGAACGGAAACGATGATTTCGCCGGAGTTCCGATT
CACAACCGTCGGCGGAGATTAATGAGTACTGTTGCGTCGGCGAAAAATGAGAATTTCCCG
AAATGGCTGTCACGGAAGGATCGAAAGTTACTGGATGCGCCAGTTTCGACAATTCAAGCA
GATATGATCGTTTCAAAAGACGGTAACGGAACGTTCAAGACAATTGCAGAGGCAATTAAG
AAGCTCCCTGATTACAGTTCTCGTAGAATAATAATTTACGTCAAGGCAGGAAGGTATGAA
GAAGATATCCTGAAAGTAGGGAGGAAAAAGACGAACGTAATGTTCATAGGTGACGGTAAA
GGCCAGACGATGATATCAGGTGGCAAAAGTGTATCACAGAATCTGACGACATTCCATACC
GCGTCTTTCGCGGCAACTGGAGCTGGATTCATTGCAAGAGACATTACATTTCAGAACTGG
GCTGGGCCAGGCAAGCATCAAGCGGTAGCTCTTCGTATTGGTGCTGATCATGCTGTGATT
TATCGATGCAACATCATCGGATACCAAGACACTCTGTACGTGCACTCCCAGCGCCAATTC
TATCGCGAGTGTGATATCTATGGGACAGTTGATTTCATCTTCGGTAATGCAGCAGTGGTC
ATCCAAAACTGCAGCATTTATGCTCGAAAGCCAATGGACTTTCAAAAGAACACCATCACA
GCTCAAAACAGGAAAGATCCCAATCAAAACACTGGCATTTCAATCCATGCTTGCAAAATC
ATAGCCACATCTGACCTCCAGGCATCTAAAGGGAGTTTCCCCACGTATCTAGGGCGACCA
TGGAAGCTGTACTCACGAACTGTTGTCATGTTATCTTACTTGGGTGATCACATACACCCG
CATGGTTGGTTAGAGTGGAATGCTACTTTTGCTCTTGATACATTGTATTATGGTGAGTAT
ATGAATTATGGGCCGGGAGCAGCCGTGGGGCAACGGGTAAAATGGCCGGGATATCATGTG
ATCAATTCCACGGATGAGGCCAGCAAGTTCACTGTAGCTCAATTCATTTTCGGATCATCG
TGGTTGCCTTCAACTGGGGTGGCATTCTTGGCAGGTTTGAGTACCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400034073
PEP Infomation

pacid=37454076 transcript=PGSC0003DMT400050474 locus=PGSC0003DMG400019611 ID=PGSC0003DMT400050474.v4.03 annot-version=v4.03
Sequence

MDYARLGKPKPKDLSRREILPKFEENAPNQRSKLKIVLIFSSILIIASAISAAVVVTVRS
TTKTGATVRHIKPSQAISRTCSRTRFPTLCLNSLHEFPGALTASDAELVHISVNATLQRF
GRAFYMASDINSLVMDKRTRSAYESCLELLEDSVYLLSRSLTSVAPGAGKSPPGNNNDVQ
TWLSAALTNQDTCTEGFADVSGNVKDQMATNLKDLSQLVSNCLAIFAAVNGNDDFAGVPI
HNRRRRLMSTVASAKNENFPKWLSRKDRKLLDAPVSTIQADMIVSKDGNGTFKTIAEAIK
KLPDYSSRRIIIYVKAGRYEEDILKVGRKKTNVMFIGDGKGQTMISGGKSVSQNLTTFHT
ASFAATGAGFIARDITFQNWAGPGKHQAVALRIGADHAVIYRCNIIGYQDTLYVHSQRQF
YRECDIYGTVDFIFGNAAVVIQNCSIYARKPMDFQKNTITAQNRKDPNQNTGISIHACKI
IATSDLQASKGSFPTYLGRPWKLYSRTVVMLSYLGDHIHPHGWLEWNATFALDTLYYGEY
MNYGPGAAVGQRVKWPGYHVINSTDEASKFTVAQFIFGSSWLPSTGVAFLAGLST*

Transcript Sequence

Transcript ID

PGSC0003DMT400050474
Transcript Infomation

pacid=37454076 locus=PGSC0003DMG400019611 ID=PGSC0003DMT400050474.v4.03 annot-version=v4.03
Sequence

ATGGACTACGCCAGGCTTGGAAAACCCAAGCCTAAAGATCTCTCACGCCGAGAAATACTG
CCAAAATTTGAAGAGAATGCGCCCAATCAAAGGTCCAAACTCAAAATTGTACTCATTTTC
TCTAGCATTCTTATAATTGCTTCTGCAATTTCTGCAGCAGTTGTGGTAACTGTGCGGAGT
ACTACTAAAACGGGTGCCACAGTGCGTCATATAAAGCCCAGTCAGGCAATTTCACGAACA
TGTAGTCGAACTCGCTTCCCAACACTCTGTTTAAACTCTTTACATGAATTCCCCGGCGCA
CTCACCGCTTCCGACGCCGAACTCGTCCACATTTCCGTCAATGCGACGCTTCAGCGTTTT
GGCAGGGCGTTTTACATGGCGTCCGATATTAACAGCCTTGTCATGGATAAGCGTACAAGG
TCCGCTTACGAGAGTTGCCTTGAGCTGTTAGAAGATTCTGTTTACCTTCTATCCCGATCC
TTAACCTCCGTTGCTCCCGGCGCCGGAAAATCACCGCCGGGAAACAATAACGACGTGCAG
ACGTGGCTGAGCGCTGCGCTCACCAACCAGGACACGTGTACGGAAGGTTTCGCTGATGTT
AGCGGGAACGTGAAGGATCAGATGGCGACAAATTTGAAGGATTTGTCTCAATTGGTGAGC
AATTGCTTAGCCATTTTCGCTGCCGTGAACGGAAACGATGATTTCGCCGGAGTTCCGATT
CACAACCGTCGGCGGAGATTAATGAGTACTGTTGCGTCGGCGAAAAATGAGAATTTCCCG
AAATGGCTGTCACGGAAGGATCGAAAGTTACTGGATGCGCCAGTTTCGACAATTCAAGCA
GATATGATCGTTTCAAAAGACGGTAACGGAACGTTCAAGACAATTGCAGAGGCAATTAAG
AAGCTCCCTGATTACAGTTCTCGTAGAATAATAATTTACGTCAAGGCAGGAAGGTATGAA
GAAGATATCCTGAAAGTAGGGAGGAAAAAGACGAACGTAATGTTCATAGGTGACGGTAAA
GGCCAGACGATGATATCAGGTGGCAAAAGTGTATCACAGAATCTGACGACATTCCATACC
GCGTCTTTCGCGGCAACTGGAGCTGGATTCATTGCAAGAGACATTACATTTCAGAACTGG
GCTGGGCCAGGCAAGCATCAAGCGGTAGCTCTTCGTATTGGTGCTGATCATGCTGTGATT
TATCGATGCAACATCATCGGATACCAAGACACTCTGTACGTGCACTCCCAGCGCCAATTC
TATCGCGAGTGTGATATCTATGGGACAGTTGATTTCATCTTCGGTAATGCAGCAGTGGTC
ATCCAAAACTGCAGCATTTATGCTCGAAAGCCAATGGACTTTCAAAAGAACACCATCACA
GCTCAAAACAGGAAAGATCCCAATCAAAACACTGGCATTTCAATCCATGCTTGCAAAATC
ATAGCCACATCTGACCTCCAGGCATCTAAAGGGAGTTTCCCCACGTATCTAGGGCGACCA
TGGAAGCTGTACTCACGAACTGTTGTCATGTTATCTTACTTGGGTGATCACATACACCCG
CATGGTTGGTTAGAGTGGAATGCTACTTTTGCTCTTGATACATTGTATTATGGTGAGTAT
ATGAATTATGGGCCGGGAGCAGCCGTGGGGCAACGGGTAAAATGGCCGGGATATCATGTG
ATCAATTCCACGGATGAGGCCAGCAAGTTCACTGTAGCTCAATTCATTTTCGGATCATCG
TGGTTGCCTTCAACTGGGGTGGCATTCTTGGCAGGTTTGAGTACCTGA