Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050451
CDS Infomation

pacid=37453032 polypeptide=PGSC0003DMP400034059 locus=PGSC0003DMG400019605 ID=PGSC0003DMT400050451.v4.03 annot-version=v4.03
Sequence

ATGTTGGGTGGTGTAGCTTCTGTTGCCATATTCACCAATCAATCTGCACTGTCAAATAAT
GGCTTTCAAATTGCTTCATTCTTGCTTGTTAGATCTTCCAACCTGTCCAGGAAGTACTCA
ATTCCACAACCTTTTTTCAAAATTCCTGGCTTTAGGGAACATATTGTCCAATTTATAGCC
AGTAATAATGGAAACCTTGCCAGAAAGAACATTGTCTTTGCTATTCCAAATGAAAAGGAT
GATGCTGAAAAAGAAGGCTCAGATTACTATATTGATTATCCGGTCATCGTTGGTCAGAAA
GAAGATGGGAGTTCTTGTGCACCAGAGATGGGAACAACTTTTTCCTTGTTGCCATGTGGT
GAAGGTATTCTTAGAAGTTATGAGATCAATGGTAAAGAAGACGGCCTGCTTGCTAAGCTG
ATGGCAGTTCATTTGCATGTACTGGCAATGGAACAATGGAATGCTTCCAAACTTAAAATG
TCTCACAAAAATTACTTGGTCAGTGCGACAAACCTGATTCATTATTTGGCCTTGAAAAGC
CTCAACATAGAGCAGCTTAAAGAAGAACTTTCTTCCATTTGTTTACTGAATTTAGACACA
ATAAATCAACATGTTCTAGCAAGTCTTTCTGCAGGCATCCGGCTGTTAGATAATTTAAAA
TATGATTCTTCTAGTCATACTATCTCTTATAGTGAAGGAATCTCTTCAACAAAAGGTCTG
GACAAACAAATGAAGGGGGAATTTTCTATTAATACACTAAGGAGGAGGGCATCCCATACT
GCGGACCTGTTATTGGGCAGATTGCCAGAGAAGAGAAACACCCATATCATGGTAACAGTG
GGTGAAGAAGCTATAGAAAGTGAAACATTAATGAAAGATCTTCTAAATGCTGGAACTACC
ATTGTTCGTATCAATTGTGCTCATGGAAGCCCTGAAATTTGGAGTGAGATAATCAGAAGG
GTGAAAAGAAGCTCTCAAATTCTTGAAAAGCCTTGTCGAATTCTCATGGACTTAGCTGGG
CCCAAGCTTCGAACTGGAAAACTGCAGGCTGGTCCATGTGTGTTGAAAATATCTCCCAAG
AAGAATGCTTATGGGAAAGTGATATATCCTGCCCTAGTTTGGCTCTCAAGCCCAGGAGCT
GCTTCTCCACCAGCCCATGTATCCCCTGATGCTATTCTACATGTGGACGGTGAAGAACTT
CTTAGTAAGCTCGAGGTTGATGATGTTGTGACATTATTTGATGCTCGTGGAAAACAAAGG
ACACTTAAGATCATAAGCAGGTATCCTATTTTCTCAGGCGTCGGATATATGGCTGAGTGC
AGTAAGGCTGCTTATGTCAAGTCAGGTGCAAAATTGTTTATCAAGGACAAGAGAAGGAAA
TTATCAGCTGGACATGTAGTAAATATTCCTCCTCTCAAGCAATTTATCAAATTAAGGGTT
GATGACTTGCTGAGTATATCACGAGATGGTCAAAATGAAGAAAACAATTTGACTTCTTCC
ACTGGTGCGCACAGGATAGCCTGCTCATCTGAATATGTTTTTGATTCAGTGAAGCCTGGG
GAACCTATTGCTTTTGATGATGGGAAGATATGGGGTATTATTAAAGCAACTAGCACTTTG
GAAATTCTTGTGTCAATCACCCATGCAGGTCCCAGGGGTAGTAAACTTGGATCAGAGAAG
TCCATAAATATTCCGCGGAGCAATATTCGGTATGAAGGTCTCACTTCAAAGGACCTTATA
GATCTTGACTTTGTGGCCAACCATGCAGACATGGTGGGTGTTTCATTTGTCCGAGATGTC
CGTGACATTCTACTGTTGCGCCAAGAACTTGAGAAGCGGAAAAGAAGGGACTTGGGGATT
TCTTTAAAGATCGAGACAAAAGAAGGATTTGAGAAATTGCCGCTCCTACTACTGGAGGCA
ATGAAAATGCCAAATCCTTTGGGCATTATGATTGCCAGAGGAGATCTTGCTGTAGAGTGT
GGATGGGAAAACATGGCATATATACAGAAGGAGATAATCTCTGTCTGCACAGCTGCTCAT
GTTCCTGTCATTTGGGCAACACAGGTCCTGGAGTCGCTCGTCAGATCTGGAGTGCCTACT
AGAGCTGAGCTTACTGATGTGGCAGAAGGAATGAGGACAAGTTGTATCATGTTGAACAAG
GGTAAATGCATTGTGGAAGCTGTCTCTTTCTTACACAGAATATTGAGCAATCACTCCACG
AAGTTAGATGCAGAATTTAAGCCTCTTGCTTTATCCAGCCACGACTTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400034059
PEP Infomation

pacid=37453032 transcript=PGSC0003DMT400050451 locus=PGSC0003DMG400019605 ID=PGSC0003DMT400050451.v4.03 annot-version=v4.03
Sequence

MLGGVASVAIFTNQSALSNNGFQIASFLLVRSSNLSRKYSIPQPFFKIPGFREHIVQFIA
SNNGNLARKNIVFAIPNEKDDAEKEGSDYYIDYPVIVGQKEDGSSCAPEMGTTFSLLPCG
EGILRSYEINGKEDGLLAKLMAVHLHVLAMEQWNASKLKMSHKNYLVSATNLIHYLALKS
LNIEQLKEELSSICLLNLDTINQHVLASLSAGIRLLDNLKYDSSSHTISYSEGISSTKGL
DKQMKGEFSINTLRRRASHTADLLLGRLPEKRNTHIMVTVGEEAIESETLMKDLLNAGTT
IVRINCAHGSPEIWSEIIRRVKRSSQILEKPCRILMDLAGPKLRTGKLQAGPCVLKISPK
KNAYGKVIYPALVWLSSPGAASPPAHVSPDAILHVDGEELLSKLEVDDVVTLFDARGKQR
TLKIISRYPIFSGVGYMAECSKAAYVKSGAKLFIKDKRRKLSAGHVVNIPPLKQFIKLRV
DDLLSISRDGQNEENNLTSSTGAHRIACSSEYVFDSVKPGEPIAFDDGKIWGIIKATSTL
EILVSITHAGPRGSKLGSEKSINIPRSNIRYEGLTSKDLIDLDFVANHADMVGVSFVRDV
RDILLLRQELEKRKRRDLGISLKIETKEGFEKLPLLLLEAMKMPNPLGIMIARGDLAVEC
GWENMAYIQKEIISVCTAAHVPVIWATQVLESLVRSGVPTRAELTDVAEGMRTSCIMLNK
GKCIVEAVSFLHRILSNHSTKLDAEFKPLALSSHDF*

Transcript Sequence

Transcript ID

PGSC0003DMT400050451
Transcript Infomation

pacid=37453032 locus=PGSC0003DMG400019605 ID=PGSC0003DMT400050451.v4.03 annot-version=v4.03
Sequence

ATGTTGGGTGGTGTAGCTTCTGTTGCCATATTCACCAATCAATCTGCACTGTCAAATAAT
GGCTTTCAAATTGCTTCATTCTTGCTTGTTAGATCTTCCAACCTGTCCAGGAAGTACTCA
ATTCCACAACCTTTTTTCAAAATTCCTGGCTTTAGGGAACATATTGTCCAATTTATAGCC
AGTAATAATGGAAACCTTGCCAGAAAGAACATTGTCTTTGCTATTCCAAATGAAAAGGAT
GATGCTGAAAAAGAAGGCTCAGATTACTATATTGATTATCCGGTCATCGTTGGTCAGAAA
GAAGATGGGAGTTCTTGTGCACCAGAGATGGGAACAACTTTTTCCTTGTTGCCATGTGGT
GAAGGTATTCTTAGAAGTTATGAGATCAATGGTAAAGAAGACGGCCTGCTTGCTAAGCTG
ATGGCAGTTCATTTGCATGTACTGGCAATGGAACAATGGAATGCTTCCAAACTTAAAATG
TCTCACAAAAATTACTTGGTCAGTGCGACAAACCTGATTCATTATTTGGCCTTGAAAAGC
CTCAACATAGAGCAGCTTAAAGAAGAACTTTCTTCCATTTGTTTACTGAATTTAGACACA
ATAAATCAACATGTTCTAGCAAGTCTTTCTGCAGGCATCCGGCTGTTAGATAATTTAAAA
TATGATTCTTCTAGTCATACTATCTCTTATAGTGAAGGAATCTCTTCAACAAAAGGTCTG
GACAAACAAATGAAGGGGGAATTTTCTATTAATACACTAAGGAGGAGGGCATCCCATACT
GCGGACCTGTTATTGGGCAGATTGCCAGAGAAGAGAAACACCCATATCATGGTAACAGTG
GGTGAAGAAGCTATAGAAAGTGAAACATTAATGAAAGATCTTCTAAATGCTGGAACTACC
ATTGTTCGTATCAATTGTGCTCATGGAAGCCCTGAAATTTGGAGTGAGATAATCAGAAGG
GTGAAAAGAAGCTCTCAAATTCTTGAAAAGCCTTGTCGAATTCTCATGGACTTAGCTGGG
CCCAAGCTTCGAACTGGAAAACTGCAGGCTGGTCCATGTGTGTTGAAAATATCTCCCAAG
AAGAATGCTTATGGGAAAGTGATATATCCTGCCCTAGTTTGGCTCTCAAGCCCAGGAGCT
GCTTCTCCACCAGCCCATGTATCCCCTGATGCTATTCTACATGTGGACGGTGAAGAACTT
CTTAGTAAGCTCGAGGTTGATGATGTTGTGACATTATTTGATGCTCGTGGAAAACAAAGG
ACACTTAAGATCATAAGCAGGTATCCTATTTTCTCAGGCGTCGGATATATGGCTGAGTGC
AGTAAGGCTGCTTATGTCAAGTCAGGTGCAAAATTGTTTATCAAGGACAAGAGAAGGAAA
TTATCAGCTGGACATGTAGTAAATATTCCTCCTCTCAAGCAATTTATCAAATTAAGGGTT
GATGACTTGCTGAGTATATCACGAGATGGTCAAAATGAAGAAAACAATTTGACTTCTTCC
ACTGGTGCGCACAGGATAGCCTGCTCATCTGAATATGTTTTTGATTCAGTGAAGCCTGGG
GAACCTATTGCTTTTGATGATGGGAAGATATGGGGTATTATTAAAGCAACTAGCACTTTG
GAAATTCTTGTGTCAATCACCCATGCAGGTCCCAGGGGTAGTAAACTTGGATCAGAGAAG
TCCATAAATATTCCGCGGAGCAATATTCGGTATGAAGGTCTCACTTCAAAGGACCTTATA
GATCTTGACTTTGTGGCCAACCATGCAGACATGGTGGGTGTTTCATTTGTCCGAGATGTC
CGTGACATTCTACTGTTGCGCCAAGAACTTGAGAAGCGGAAAAGAAGGGACTTGGGGATT
TCTTTAAAGATCGAGACAAAAGAAGGATTTGAGAAATTGCCGCTCCTACTACTGGAGGCA
ATGAAAATGCCAAATCCTTTGGGCATTATGATTGCCAGAGGAGATCTTGCTGTAGAGTGT
GGATGGGAAAACATGGCATATATACAGAAGGAGATAATCTCTGTCTGCACAGCTGCTCAT
GTTCCTGTCATTTGGGCAACACAGGTCCTGGAGTCGCTCGTCAGATCTGGAGTGCCTACT
AGAGCTGAGCTTACTGATGTGGCAGAAGGAATGAGGACAAGTTGTATCATGTTGAACAAG
GGTAAATGCATTGTGGAAGCTGTCTCTTTCTTACACAGAATATTGAGCAATCACTCCACG
AAGTTAGATGCAGAATTTAAGCCTCTTGCTTTATCCAGCCACGACTTTTAG