Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050364
CDS Infomation

pacid=37432791 polypeptide=PGSC0003DMP400033993 locus=PGSC0003DMG400019575 ID=PGSC0003DMT400050364.v4.03 annot-version=v4.03
Sequence

ATGCTTACGTGCATAGCTCGTTCGAAGCAATCGAGCGATGATTCCCTTGATCAACCTGAA
AAATTCAATCCAAATGCTGTTCCGCCTAATAAACAATCTGTCAAAACACTTACTTCTCAG
ATCAAGGACATGGCATTGAAAGCATCAGGAGCATACAAACAGTGTGGTCCATGTGCGACT
CAGCCGTCGACTCTCAGAAAAAACGACTCCGACTCGTTGGATAAATTCCGGTGGTCTTAT
AAGAGAACAGGGAGTTCGAGTTCCAGCTCTACGGCTGGGAGGAAGGAGCTGGAAGCGAGG
CTTAAGGGAATATCAAGCGGGGAAGTTACGCCGGTATCGGCGTCAGCTAGTGGCCGGAGA
GCTGAACCGGTGGTGTTTGTTGAAGAAAGCGAGCCGAAAGAGTGGGTGGCTCAAGTCGAA
CCGGGTGTTCTAATCACTTTCGTTTCATTACCACGTGGCGGCAATGATCTTAAGCGGATT
CGATTCAGTCGAGAAATGTTTAATAAATACCAAGCTCAAAGGTGGTGGTCAGAGAATTGT
GAGAAGGTAATGGAGCTTTATAATGTGCAAAGGTTGAATCGTCAAGCTTTTCCCCTTCCA
ACACCTCCAAGATCCGAAGACGGGAGTTCAAAAATCGAATCGATTGAAGACAGTCCTGTG
ACACCCCCGCTGACTAAAGAACGACTACCACATACTTTGTTCCGTCCAATGTATTCATCT
TCAGATTCTCTTGAACTACAATCAACCCATTCTCGCTATAATTATGACTCTTGTGGTGTC
TCCTCAACTCCAAAACTCTCAAGCATCAGTGGAACAAAGACAGAGATATCATCAATGGAT
CATGCCTCTATGAGGACTAGCACATCAAGAGATGCAGATCGCTCTGGAGAGCTATCTATC
AGCAATGCCAGTGATCTTGAAACTGAATGGGTTGAGCAAGATGAGCCTGGGGTTTACATC
ACTATACAAGCACTACCAGATGGCAGACGAGAACTCAAACGTGTCAGATTCAGCCGAGAA
AAATTTGGAGAAGTGCATGCCAGGTTATGGTGGGAAGAGAATCGTGCTAGGATACACAAA
CAATACCTGGGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400033993
PEP Infomation

pacid=37432791 transcript=PGSC0003DMT400050364 locus=PGSC0003DMG400019575 ID=PGSC0003DMT400050364.v4.03 annot-version=v4.03
Sequence

MLTCIARSKQSSDDSLDQPEKFNPNAVPPNKQSVKTLTSQIKDMALKASGAYKQCGPCAT
QPSTLRKNDSDSLDKFRWSYKRTGSSSSSSTAGRKELEARLKGISSGEVTPVSASASGRR
AEPVVFVEESEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKYQAQRWWSENC
EKVMELYNVQRLNRQAFPLPTPPRSEDGSSKIESIEDSPVTPPLTKERLPHTLFRPMYSS
SDSLELQSTHSRYNYDSCGVSSTPKLSSISGTKTEISSMDHASMRTSTSRDADRSGELSI
SNASDLETEWVEQDEPGVYITIQALPDGRRELKRVRFSREKFGEVHARLWWEENRARIHK
QYLG*

Transcript Sequence

Transcript ID

PGSC0003DMT400050364
Transcript Infomation

pacid=37432791 locus=PGSC0003DMG400019575 ID=PGSC0003DMT400050364.v4.03 annot-version=v4.03
Sequence

ATGCTTACGTGCATAGCTCGTTCGAAGCAATCGAGCGATGATTCCCTTGATCAACCTGAA
AAATTCAATCCAAATGCTGTTCCGCCTAATAAACAATCTGTCAAAACACTTACTTCTCAG
ATCAAGGACATGGCATTGAAAGCATCAGGAGCATACAAACAGTGTGGTCCATGTGCGACT
CAGCCGTCGACTCTCAGAAAAAACGACTCCGACTCGTTGGATAAATTCCGGTGGTCTTAT
AAGAGAACAGGGAGTTCGAGTTCCAGCTCTACGGCTGGGAGGAAGGAGCTGGAAGCGAGG
CTTAAGGGAATATCAAGCGGGGAAGTTACGCCGGTATCGGCGTCAGCTAGTGGCCGGAGA
GCTGAACCGGTGGTGTTTGTTGAAGAAAGCGAGCCGAAAGAGTGGGTGGCTCAAGTCGAA
CCGGGTGTTCTAATCACTTTCGTTTCATTACCACGTGGCGGCAATGATCTTAAGCGGATT
CGATTCAGTCGAGAAATGTTTAATAAATACCAAGCTCAAAGGTGGTGGTCAGAGAATTGT
GAGAAGGTAATGGAGCTTTATAATGTGCAAAGGTTGAATCGTCAAGCTTTTCCCCTTCCA
ACACCTCCAAGATCCGAAGACGGGAGTTCAAAAATCGAATCGATTGAAGACAGTCCTGTG
ACACCCCCGCTGACTAAAGAACGACTACCACATACTTTGTTCCGTCCAATGTATTCATCT
TCAGATTCTCTTGAACTACAATCAACCCATTCTCGCTATAATTATGACTCTTGTGGTGTC
TCCTCAACTCCAAAACTCTCAAGCATCAGTGGAACAAAGACAGAGATATCATCAATGGAT
CATGCCTCTATGAGGACTAGCACATCAAGAGATGCAGATCGCTCTGGAGAGCTATCTATC
AGCAATGCCAGTGATCTTGAAACTGAATGGGTTGAGCAAGATGAGCCTGGGGTTTACATC
ACTATACAAGCACTACCAGATGGCAGACGAGAACTCAAACGTGTCAGATTCAGCCGAGAA
AAATTTGGAGAAGTGCATGCCAGGTTATGGTGGGAAGAGAATCGTGCTAGGATACACAAA
CAATACCTGGGATGA