Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050345
CDS Infomation

pacid=37433215 polypeptide=PGSC0003DMP400033981 locus=PGSC0003DMG400019567 ID=PGSC0003DMT400050345.v4.03 annot-version=v4.03
Sequence

ATGACAAATCTAGTAGTATTCCTTTCTCTGTTACTACTGTTTCCCTTGCTTATATTAAGC
TATTTTCTTGTCAAAATTTCCTACTCCATCTTCATAAAACCAAAATTGCTGGAAAAGCGC
TTGAAGCGGCAAGGATTCAAAGGAACTCAATACAAGTTGTTGCTTGGAGACCTCAAAGAT
GTTGGCAATCAAATGGATGAGGCATGGTCCAAACCAATTAGCTTAACCCACGATATTGTG
TCGCGTGTTGATCCCTTCACTCACTATATGGTCCAAAAATATGGGAAGATATCTCTGAGT
TGGCTTGGGACGTCACCAAGATTGATCATCATGGATCCAACACTGATAAAAGAAGTGCTC
TTAAACAAGCAAGGCCAATTTCATTTACCACCATTGAACCCTCTTGTGTTGATTCTTACT
AAAGGATTGACAACTCTACAAGGTGAAAAATGGGCTATGCACAGAAAGATAATGAATCCT
GCTTTCCACTTGGACAAATTGAAGGGAACGATCCCAACAATTGCAGAAAGTTGCACGTTT
ACGATAGAGAAGTGGATGAAAACAATTAGCCCTGAGGGGACTTCAGAAATAGATATATGG
CCTGAATTTCAACAACTTGCCGGTGATATCATTTCAAGAACAGCATTTGGAAGTAGCTTC
GAAGATGGAAAGAAGATCCTAGAACTACAAAAAGAACTACAACAACTTGTGATTGAGGCT
ATGGGAATGTTATATATTCCTGGCTTTAGATTTGTTCCAACGAAAAAGAATCGAAGAAGA
AAGGACTTGGATAGAAGGATCACTTCAATGCTTAAAACAATTGTGGACACAAAAGAGAAC
ATGATCAGAACAGGGGAAACAAGGGGAGATGACTTGCTTGGCCTGCTGTTGCAATTTAAC
AATGAGAATAATTCAGTAAATAATAGTCAGATGACAAAGGAGGACATAATAGAAGAATGC
AAACAGTTTTACCTTGCCGGTCATGAAACAACATCGAGCTTGTTGACATGGACTCTCATT
GTGTTGGCTATTCATCAGGATTGGCAAGAAAAGGCAAGGGAAGAAGTTCTACAAGTTGTC
AGGGAGAAGAATCCTGATGCTGAAGAAATAAGTCACCTCAAAATTGTAACTATGATACTT
AATGAAGTGCTTCGGCTATATCCACCGGTGATTTCCTTGTACAAACGCGCTTACAAAGAA
TGTAGAATAGGAGATCTCTCTATTCCAGCAGGAGTGGATCTGACACTACCTATAATGCTA
ATTAATCGCGACATTGAGCTATGGGGTGACGATGCAGATGAATTTAAACCAGAGAGGTTC
GCGGAAGGAATTTCACATGCTTGCAAAGATCCAACACAGATGGCATTCATGCCATTTGGA
TGGGGACCAAGGACTTGTATTGGCCAAAATTTCTCCATGATAGAAGCAAAGATTGCACTG
TCTATGATACTAAAGCAGTTCTCCTTTAAGCTCTCACCAACTTATGCTCATGCTCCTTAC
ACTGTTATGACTCTTCAACCCCAACATGGAGCTCACATCATGTTTCACTCACTTAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400033981
PEP Infomation

pacid=37433215 transcript=PGSC0003DMT400050345 locus=PGSC0003DMG400019567 ID=PGSC0003DMT400050345.v4.03 annot-version=v4.03
Sequence

MTNLVVFLSLLLLFPLLILSYFLVKISYSIFIKPKLLEKRLKRQGFKGTQYKLLLGDLKD
VGNQMDEAWSKPISLTHDIVSRVDPFTHYMVQKYGKISLSWLGTSPRLIIMDPTLIKEVL
LNKQGQFHLPPLNPLVLILTKGLTTLQGEKWAMHRKIMNPAFHLDKLKGTIPTIAESCTF
TIEKWMKTISPEGTSEIDIWPEFQQLAGDIISRTAFGSSFEDGKKILELQKELQQLVIEA
MGMLYIPGFRFVPTKKNRRRKDLDRRITSMLKTIVDTKENMIRTGETRGDDLLGLLLQFN
NENNSVNNSQMTKEDIIEECKQFYLAGHETTSSLLTWTLIVLAIHQDWQEKAREEVLQVV
REKNPDAEEISHLKIVTMILNEVLRLYPPVISLYKRAYKECRIGDLSIPAGVDLTLPIML
INRDIELWGDDADEFKPERFAEGISHACKDPTQMAFMPFGWGPRTCIGQNFSMIEAKIAL
SMILKQFSFKLSPTYAHAPYTVMTLQPQHGAHIMFHSLN*

Transcript Sequence

Transcript ID

PGSC0003DMT400050345
Transcript Infomation

pacid=37433215 locus=PGSC0003DMG400019567 ID=PGSC0003DMT400050345.v4.03 annot-version=v4.03
Sequence

ATGACAAATCTAGTAGTATTCCTTTCTCTGTTACTACTGTTTCCCTTGCTTATATTAAGC
TATTTTCTTGTCAAAATTTCCTACTCCATCTTCATAAAACCAAAATTGCTGGAAAAGCGC
TTGAAGCGGCAAGGATTCAAAGGAACTCAATACAAGTTGTTGCTTGGAGACCTCAAAGAT
GTTGGCAATCAAATGGATGAGGCATGGTCCAAACCAATTAGCTTAACCCACGATATTGTG
TCGCGTGTTGATCCCTTCACTCACTATATGGTCCAAAAATATGGGAAGATATCTCTGAGT
TGGCTTGGGACGTCACCAAGATTGATCATCATGGATCCAACACTGATAAAAGAAGTGCTC
TTAAACAAGCAAGGCCAATTTCATTTACCACCATTGAACCCTCTTGTGTTGATTCTTACT
AAAGGATTGACAACTCTACAAGGTGAAAAATGGGCTATGCACAGAAAGATAATGAATCCT
GCTTTCCACTTGGACAAATTGAAGGGAACGATCCCAACAATTGCAGAAAGTTGCACGTTT
ACGATAGAGAAGTGGATGAAAACAATTAGCCCTGAGGGGACTTCAGAAATAGATATATGG
CCTGAATTTCAACAACTTGCCGGTGATATCATTTCAAGAACAGCATTTGGAAGTAGCTTC
GAAGATGGAAAGAAGATCCTAGAACTACAAAAAGAACTACAACAACTTGTGATTGAGGCT
ATGGGAATGTTATATATTCCTGGCTTTAGATTTGTTCCAACGAAAAAGAATCGAAGAAGA
AAGGACTTGGATAGAAGGATCACTTCAATGCTTAAAACAATTGTGGACACAAAAGAGAAC
ATGATCAGAACAGGGGAAACAAGGGGAGATGACTTGCTTGGCCTGCTGTTGCAATTTAAC
AATGAGAATAATTCAGTAAATAATAGTCAGATGACAAAGGAGGACATAATAGAAGAATGC
AAACAGTTTTACCTTGCCGGTCATGAAACAACATCGAGCTTGTTGACATGGACTCTCATT
GTGTTGGCTATTCATCAGGATTGGCAAGAAAAGGCAAGGGAAGAAGTTCTACAAGTTGTC
AGGGAGAAGAATCCTGATGCTGAAGAAATAAGTCACCTCAAAATTGTAACTATGATACTT
AATGAAGTGCTTCGGCTATATCCACCGGTGATTTCCTTGTACAAACGCGCTTACAAAGAA
TGTAGAATAGGAGATCTCTCTATTCCAGCAGGAGTGGATCTGACACTACCTATAATGCTA
ATTAATCGCGACATTGAGCTATGGGGTGACGATGCAGATGAATTTAAACCAGAGAGGTTC
GCGGAAGGAATTTCACATGCTTGCAAAGATCCAACACAGATGGCATTCATGCCATTTGGA
TGGGGACCAAGGACTTGTATTGGCCAAAATTTCTCCATGATAGAAGCAAAGATTGCACTG
TCTATGATACTAAAGCAGTTCTCCTTTAAGCTCTCACCAACTTATGCTCATGCTCCTTAC
ACTGTTATGACTCTTCAACCCCAACATGGAGCTCACATCATGTTTCACTCACTTAACTAG