Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050288
CDS Infomation

pacid=37460851 polypeptide=PGSC0003DMP400033946 locus=PGSC0003DMG400019536 ID=PGSC0003DMT400050288.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCTCTGCAATTTTCAACTTTCTACCATCATCTTCATTGAGTTCTCTTTCCTTC
AGAAACAGCAGAACTCAAACCCCATTTTTTTACAAACCCCTTATAGTCAAAGCTTCTACT
TCTGTCGATTATTCTTCCTCCTCCCTCGCCGGTACATCTACAAAGAATAATAACTGGGTA
TGGAAATACAAGGACAATTCTGTGAATATTTACTACGAGGAACACGACAAGGGAAGCGAT
GAGCCTTGTAAGAACATTTTGATGATTCCCACTATTTCAGATGTTAGTACTGTTGAGGAA
TGGAGATCAGTGGCTAAAGACATTGCTGGACGAAATGGTAAAGTTAATTACAAAACTACC
ATTGTGGATTGGCCTGGTTTAGGTTACTCTGATAGACCTAAGCTTGATTACAATGCTGAT
GTTATGGAAAAGTTTTTGGTAGACTTCATTAATTCTCCTGATAGTCCGGTGAACAATTCG
GATAAGGACTTGGTGGTGTTTGGAGGAGGACATGCTGCTACCTTAGCAGTTCGTGCTGCA
AAGAAGGGCTTGGTTAAGCCAACAGCAATTGCTTCTATTGCTCCCACCTGGGCTGGTCCA
CTTCCTATTGTTTTTGGAAGAGATTCCAGCATGGAAACAAGGTATGGTTTCCTTAGAGGG
ACCTTAAGGGCCCCTGCTGTTGGTTGGATGATGTATAATGTACTTGTCAGCAATGAGAAA
TCAATAACATCACAATATAAGTCCCATGTTTATGCAGACCCTGAAAAGGTAACTCCATAT
ATCATCGAGAGCCGATTCGCACTCACTAAACGGCAAGGTGCTCGCTATGTGCCTGCTGCT
TTCTTGACTGGTTTACTTGACCCAGTAAAGTCCAGGGAGGAATTTGTCCAACTCTTTGCA
GAGTTGGAGGGTAAGATACCGTGTCTAGTTCTGGCAACAGCGGGATCTCCCAAGAGGTCA
AAAGCAGAGATGGAAGCACTTAAGGAGGCCAAAGGGGTCGGCAAGTATGTTGAAGTGCCA
GGTGCTCTCCTTCCCCAGGAAGAGTGTCCTGAAATAGTTGCAGAACAGCTTTACAGATTT
CTGCAAGAGATATATGAGCTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400033946
PEP Infomation

pacid=37460851 transcript=PGSC0003DMT400050288 locus=PGSC0003DMG400019536 ID=PGSC0003DMT400050288.v4.03 annot-version=v4.03
Sequence

MASSAIFNFLPSSSLSSLSFRNSRTQTPFFYKPLIVKASTSVDYSSSSLAGTSTKNNNWV
WKYKDNSVNIYYEEHDKGSDEPCKNILMIPTISDVSTVEEWRSVAKDIAGRNGKVNYKTT
IVDWPGLGYSDRPKLDYNADVMEKFLVDFINSPDSPVNNSDKDLVVFGGGHAATLAVRAA
KKGLVKPTAIASIAPTWAGPLPIVFGRDSSMETRYGFLRGTLRAPAVGWMMYNVLVSNEK
SITSQYKSHVYADPEKVTPYIIESRFALTKRQGARYVPAAFLTGLLDPVKSREEFVQLFA
ELEGKIPCLVLATAGSPKRSKAEMEALKEAKGVGKYVEVPGALLPQEECPEIVAEQLYRF
LQEIYEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400050288
Transcript Infomation

pacid=37460851 locus=PGSC0003DMG400019536 ID=PGSC0003DMT400050288.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCTCTGCAATTTTCAACTTTCTACCATCATCTTCATTGAGTTCTCTTTCCTTC
AGAAACAGCAGAACTCAAACCCCATTTTTTTACAAACCCCTTATAGTCAAAGCTTCTACT
TCTGTCGATTATTCTTCCTCCTCCCTCGCCGGTACATCTACAAAGAATAATAACTGGGTA
TGGAAATACAAGGACAATTCTGTGAATATTTACTACGAGGAACACGACAAGGGAAGCGAT
GAGCCTTGTAAGAACATTTTGATGATTCCCACTATTTCAGATGTTAGTACTGTTGAGGAA
TGGAGATCAGTGGCTAAAGACATTGCTGGACGAAATGGTAAAGTTAATTACAAAACTACC
ATTGTGGATTGGCCTGGTTTAGGTTACTCTGATAGACCTAAGCTTGATTACAATGCTGAT
GTTATGGAAAAGTTTTTGGTAGACTTCATTAATTCTCCTGATAGTCCGGTGAACAATTCG
GATAAGGACTTGGTGGTGTTTGGAGGAGGACATGCTGCTACCTTAGCAGTTCGTGCTGCA
AAGAAGGGCTTGGTTAAGCCAACAGCAATTGCTTCTATTGCTCCCACCTGGGCTGGTCCA
CTTCCTATTGTTTTTGGAAGAGATTCCAGCATGGAAACAAGGTATGGTTTCCTTAGAGGG
ACCTTAAGGGCCCCTGCTGTTGGTTGGATGATGTATAATGTACTTGTCAGCAATGAGAAA
TCAATAACATCACAATATAAGTCCCATGTTTATGCAGACCCTGAAAAGGTAACTCCATAT
ATCATCGAGAGCCGATTCGCACTCACTAAACGGCAAGGTGCTCGCTATGTGCCTGCTGCT
TTCTTGACTGGTTTACTTGACCCAGTAAAGTCCAGGGAGGAATTTGTCCAACTCTTTGCA
GAGTTGGAGGGTAAGATACCGTGTCTAGTTCTGGCAACAGCGGGATCTCCCAAGAGGTCA
AAAGCAGAGATGGAAGCACTTAAGGAGGCCAAAGGGGTCGGCAAGTATGTTGAAGTGCCA
GGTGCTCTCCTTCCCCAGGAAGAGTGTCCTGAAATAGTTGCAGAACAGCTTTACAGATTT
CTGCAAGAGATATATGAGCTGTAG