Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050287
CDS Infomation

pacid=37462792 polypeptide=PGSC0003DMP400033945 locus=PGSC0003DMG400019535 ID=PGSC0003DMT400050287.v4.03 annot-version=v4.03
Sequence

ATGGGAAGACCACCTTGCTGTGATAAAATTGGGGTGAAAAAAGGACCATGGACACCAGAA
GAAGATATCATCTTGGTTTCATACATTCAACAACATGGTCCTGGTAACTGGAGAGCTGTT
CCCAGTAATACTGGTTTGCTTAGATGCAGCAAAAGCTGTAGGCTCAGATGGACTAATTAT
CTCCGGCCCGGAATTAAACGTGGAAACTTCACTGAACATGAAGAAAAAATGATTATCCAT
CTCCAAGCTCTTCTAGGCAACAGATGGGCTGCGATTGCTTCGTATCTCCCACAAAGGACG
GATAACGATATAAAAAACTACTGGAATACTCATCTGAGGAAAAAGCTGAAGAAACTTCAA
GGGAATGATGAGAATAGTACTCAAGAAGGAACAACCTCATCATCATCTCAATCAAATTTC
TCAAAGGGACAGTGGGAGAGGAGGCTTCAAACAGATATTCACATGGCTAGAAAAGCCCTT
TGCGAGGCTTTATCACTTGACAAATCTGATTCATCTGCTAATCCAATTAGCCCAATTCCT
GCTCAACAACCCGTTACAGGATCCAGCTCTTATGCATCCAGTGCGGAAAACATTTCCAGG
TTACTTCAAAATTGGATGAAGGATTCCCCCAAATCATCTGAATTAAGTCGATCAACTTCT
GAGACAACTCAAAGCTCGTTGAATAACCCGTCAATTGGGTCGGGGTCAGGGTCAGGGTCG
AGTCCTAGTGAAGGTACCATAAGTGCTGCAACACCTGAGGGATTTGACTCCTTTTTTAGC
GAAGGTAATGCTTTCACACCTGAGATTTTTCAGGTGGAAAGCAAGCCAAATTTTCCGAAT
GTGAATTCGGAAAATGGTTTTTTGTTTCAAGCGGAGAGCAAGCCAAGTTTGGAAGAGTCA
CAAGTCCCGTTAACTTTGCTAGAGAAGTGGCTATTTGATGATGCTATTAATGCACCAGCA
CAAGAAGAAGAGTTTATGGGAATGGGTTTGGGTGAATCTGCTGACTTTTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400033945
PEP Infomation

pacid=37462792 transcript=PGSC0003DMT400050287 locus=PGSC0003DMG400019535 ID=PGSC0003DMT400050287.v4.03 annot-version=v4.03
Sequence

MGRPPCCDKIGVKKGPWTPEEDIILVSYIQQHGPGNWRAVPSNTGLLRCSKSCRLRWTNY
LRPGIKRGNFTEHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLRKKLKKLQ
GNDENSTQEGTTSSSSQSNFSKGQWERRLQTDIHMARKALCEALSLDKSDSSANPISPIP
AQQPVTGSSSYASSAENISRLLQNWMKDSPKSSELSRSTSETTQSSLNNPSIGSGSGSGS
SPSEGTISAATPEGFDSFFSEGNAFTPEIFQVESKPNFPNVNSENGFLFQAESKPSLEES
QVPLTLLEKWLFDDAINAPAQEEEFMGMGLGESADFF*

Transcript Sequence

Transcript ID

PGSC0003DMT400050287
Transcript Infomation

pacid=37462792 locus=PGSC0003DMG400019535 ID=PGSC0003DMT400050287.v4.03 annot-version=v4.03
Sequence

ATGGGAAGACCACCTTGCTGTGATAAAATTGGGGTGAAAAAAGGACCATGGACACCAGAA
GAAGATATCATCTTGGTTTCATACATTCAACAACATGGTCCTGGTAACTGGAGAGCTGTT
CCCAGTAATACTGGTTTGCTTAGATGCAGCAAAAGCTGTAGGCTCAGATGGACTAATTAT
CTCCGGCCCGGAATTAAACGTGGAAACTTCACTGAACATGAAGAAAAAATGATTATCCAT
CTCCAAGCTCTTCTAGGCAACAGATGGGCTGCGATTGCTTCGTATCTCCCACAAAGGACG
GATAACGATATAAAAAACTACTGGAATACTCATCTGAGGAAAAAGCTGAAGAAACTTCAA
GGGAATGATGAGAATAGTACTCAAGAAGGAACAACCTCATCATCATCTCAATCAAATTTC
TCAAAGGGACAGTGGGAGAGGAGGCTTCAAACAGATATTCACATGGCTAGAAAAGCCCTT
TGCGAGGCTTTATCACTTGACAAATCTGATTCATCTGCTAATCCAATTAGCCCAATTCCT
GCTCAACAACCCGTTACAGGATCCAGCTCTTATGCATCCAGTGCGGAAAACATTTCCAGG
TTACTTCAAAATTGGATGAAGGATTCCCCCAAATCATCTGAATTAAGTCGATCAACTTCT
GAGACAACTCAAAGCTCGTTGAATAACCCGTCAATTGGGTCGGGGTCAGGGTCAGGGTCG
AGTCCTAGTGAAGGTACCATAAGTGCTGCAACACCTGAGGGATTTGACTCCTTTTTTAGC
GAAGGTAATGCTTTCACACCTGAGATTTTTCAGGTGGAAAGCAAGCCAAATTTTCCGAAT
GTGAATTCGGAAAATGGTTTTTTGTTTCAAGCGGAGAGCAAGCCAAGTTTGGAAGAGTCA
CAAGTCCCGTTAACTTTGCTAGAGAAGTGGCTATTTGATGATGCTATTAATGCACCAGCA
CAAGAAGAAGAGTTTATGGGAATGGGTTTGGGTGAATCTGCTGACTTTTTTTGA