Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050242
CDS Infomation

pacid=37462382 polypeptide=PGSC0003DMP400033913 locus=PGSC0003DMG400019514 ID=PGSC0003DMT400050242.v4.03 annot-version=v4.03
Sequence

ATGGCGATAAAAGGAAATCCAGGAGATAACAGAAGCAGAGGCCCTGCGTCAATATTTATT
GTAGCTGGTCTTTGTTGTTTTTTCTATCTTATAGGAGTCTGGCAAAGAGGTGGTTTCGTG
AAGGGGGACAGCAAAGCTCTTCAGATAACAAAAAGGGCAGAGGACTGCAGCATTCTCTCC
AATCTAGAGTATGAAACTCATCACGGCGATCAACACGGTCTGGTTGATGATCCCAAACTG
AAAATCAAGCAGTTTGAACCTTGTGGTGAGCAATATGTTGATTATACACCGTGTCATGAT
CAAATGCGAGCAATGACATTTCCTAGAGAAAATATGAACTATAGGGAGAGACATTGTCCT
CCAGAAGAAGAGAAGCTGCATTGTCTTATTCCAGCGCCAAAAGGCTATATAACTCCTTTT
CCATGGCCGAAGAGTCGTGACTATGTACCTTATGCAAATGCACCACATAAAAGTTTAACA
GTTGAGAAGGCAGTGCAAAACTGGGTACAGCATGAAGGTGATATACTTAGATTTCCAGGT
GGTGGAACTCAGTTCCCACATGGGGCAGATGTGTATATTGACCAGCTTGCTTCTGTGATA
CCAATTGGAAATGGCACAGTTCGAACAGCATTGGATACGGGATGTGGGGTTGCTAGTTGG
GGTGCATACCTTTTTAAGAAAAACGTTATAGCCATGTCATTCGCACCAAGAGACTCACAT
GAAGCTCAAGTCCAATTTGCTTTGGAAAGAGGCGTACCAGCAGTTATTGGTGTACTTGGA
ACCATAAAATTGCCATTTCCATCAAGGGCCTTTGATATGGCTCATTGTTCACGTTGTTTG
ATTCCATGGACTGCAAACCGTGGACTGTACATGATGGAAGTGGATCGAGTTCTCAGACCA
GGGGGGTATTGGATACTTTCAGGTCCTCCCATCAGCTGGCAGACTAATTATAAGGCTTGG
CAACTACCTAAAGAGGAGCTGGAGGAGGAACAAAGAATGATTGAAGAGATAGCTAAGCTT
CTCTGCTGGGAAAAGAAGTACGAGAAAGGTGAGATAGCTATATGGAGAAAACGTGTTAAC
TCCGAGTACTGCAGTGAACGAGATTCCCGTGTAACTCTATGTGACCTCTCGAATTCAGAA
AATGTCTGGTATAAGAAGATGGAGGCATGTGTAACTCCGTATCCTGAAACAATCAATTCG
GAGCAAGTTTCTGGTGGAGAGCTCAAGCCATTTCCGGAGAGACTTAATGCTATTCCTCCA
AGAATAGCAAGTGGATCTCTTACTGGAGTCTCTGTTGAATCATTCCAGGAGGACAACAAG
TCATGGAAGAAGCATGTGAAAGCTTATAAGAGAGTTAACAAGCTCCTTGACACTAGGAGG
TATCGCAGTGTACTGGATATGAATGCTGGCCTAGGAAGTTTTGCTGCAGCTCTAGAATCA
TCTAAGCTATGGGTCATGAATGTTGTGCCAACTATAGCTGAAAGGGACACTCTTGCTGTA
ATATATGATCGAGGCCTGATTGGCATATACCATGACTGGTGTGAAGCCTTCTCTACCTAC
CCTCGGACATATGACTTTATTCATGCAAATGGGATCTTCAGCTTATACAAGGACAAATGT
AATACCGAAGACATTCTACTAGAGATGGACAGGATTCTTAGACCAGAAGGCGCAGTTATT
TTCCGAGATGATGCAGATATTCTTGGCCGAGTAAAAAGAATTGTATCTGGTATGAGGTGG
AAAACAAAAATGGTAGATCATGAGGATGGTCCTCTTATCTCTAAAAAGGTATTGTTTGCT
GTCAAAAGATACTGGGTTGTTGGAGATAACAACTCAACCATCTTACGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400033913
PEP Infomation

pacid=37462382 transcript=PGSC0003DMT400050242 locus=PGSC0003DMG400019514 ID=PGSC0003DMT400050242.v4.03 annot-version=v4.03
Sequence

MAIKGNPGDNRSRGPASIFIVAGLCCFFYLIGVWQRGGFVKGDSKALQITKRAEDCSILS
NLEYETHHGDQHGLVDDPKLKIKQFEPCGEQYVDYTPCHDQMRAMTFPRENMNYRERHCP
PEEEKLHCLIPAPKGYITPFPWPKSRDYVPYANAPHKSLTVEKAVQNWVQHEGDILRFPG
GGTQFPHGADVYIDQLASVIPIGNGTVRTALDTGCGVASWGAYLFKKNVIAMSFAPRDSH
EAQVQFALERGVPAVIGVLGTIKLPFPSRAFDMAHCSRCLIPWTANRGLYMMEVDRVLRP
GGYWILSGPPISWQTNYKAWQLPKEELEEEQRMIEEIAKLLCWEKKYEKGEIAIWRKRVN
SEYCSERDSRVTLCDLSNSENVWYKKMEACVTPYPETINSEQVSGGELKPFPERLNAIPP
RIASGSLTGVSVESFQEDNKSWKKHVKAYKRVNKLLDTRRYRSVLDMNAGLGSFAAALES
SKLWVMNVVPTIAERDTLAVIYDRGLIGIYHDWCEAFSTYPRTYDFIHANGIFSLYKDKC
NTEDILLEMDRILRPEGAVIFRDDADILGRVKRIVSGMRWKTKMVDHEDGPLISKKVLFA
VKRYWVVGDNNSTILR*

Transcript Sequence

Transcript ID

PGSC0003DMT400050242
Transcript Infomation

pacid=37462382 locus=PGSC0003DMG400019514 ID=PGSC0003DMT400050242.v4.03 annot-version=v4.03
Sequence

ATGGCGATAAAAGGAAATCCAGGAGATAACAGAAGCAGAGGCCCTGCGTCAATATTTATT
GTAGCTGGTCTTTGTTGTTTTTTCTATCTTATAGGAGTCTGGCAAAGAGGTGGTTTCGTG
AAGGGGGACAGCAAAGCTCTTCAGATAACAAAAAGGGCAGAGGACTGCAGCATTCTCTCC
AATCTAGAGTATGAAACTCATCACGGCGATCAACACGGTCTGGTTGATGATCCCAAACTG
AAAATCAAGCAGTTTGAACCTTGTGGTGAGCAATATGTTGATTATACACCGTGTCATGAT
CAAATGCGAGCAATGACATTTCCTAGAGAAAATATGAACTATAGGGAGAGACATTGTCCT
CCAGAAGAAGAGAAGCTGCATTGTCTTATTCCAGCGCCAAAAGGCTATATAACTCCTTTT
CCATGGCCGAAGAGTCGTGACTATGTACCTTATGCAAATGCACCACATAAAAGTTTAACA
GTTGAGAAGGCAGTGCAAAACTGGGTACAGCATGAAGGTGATATACTTAGATTTCCAGGT
GGTGGAACTCAGTTCCCACATGGGGCAGATGTGTATATTGACCAGCTTGCTTCTGTGATA
CCAATTGGAAATGGCACAGTTCGAACAGCATTGGATACGGGATGTGGGGTTGCTAGTTGG
GGTGCATACCTTTTTAAGAAAAACGTTATAGCCATGTCATTCGCACCAAGAGACTCACAT
GAAGCTCAAGTCCAATTTGCTTTGGAAAGAGGCGTACCAGCAGTTATTGGTGTACTTGGA
ACCATAAAATTGCCATTTCCATCAAGGGCCTTTGATATGGCTCATTGTTCACGTTGTTTG
ATTCCATGGACTGCAAACCGTGGACTGTACATGATGGAAGTGGATCGAGTTCTCAGACCA
GGGGGGTATTGGATACTTTCAGGTCCTCCCATCAGCTGGCAGACTAATTATAAGGCTTGG
CAACTACCTAAAGAGGAGCTGGAGGAGGAACAAAGAATGATTGAAGAGATAGCTAAGCTT
CTCTGCTGGGAAAAGAAGTACGAGAAAGGTGAGATAGCTATATGGAGAAAACGTGTTAAC
TCCGAGTACTGCAGTGAACGAGATTCCCGTGTAACTCTATGTGACCTCTCGAATTCAGAA
AATGTCTGGTATAAGAAGATGGAGGCATGTGTAACTCCGTATCCTGAAACAATCAATTCG
GAGCAAGTTTCTGGTGGAGAGCTCAAGCCATTTCCGGAGAGACTTAATGCTATTCCTCCA
AGAATAGCAAGTGGATCTCTTACTGGAGTCTCTGTTGAATCATTCCAGGAGGACAACAAG
TCATGGAAGAAGCATGTGAAAGCTTATAAGAGAGTTAACAAGCTCCTTGACACTAGGAGG
TATCGCAGTGTACTGGATATGAATGCTGGCCTAGGAAGTTTTGCTGCAGCTCTAGAATCA
TCTAAGCTATGGGTCATGAATGTTGTGCCAACTATAGCTGAAAGGGACACTCTTGCTGTA
ATATATGATCGAGGCCTGATTGGCATATACCATGACTGGTGTGAAGCCTTCTCTACCTAC
CCTCGGACATATGACTTTATTCATGCAAATGGGATCTTCAGCTTATACAAGGACAAATGT
AATACCGAAGACATTCTACTAGAGATGGACAGGATTCTTAGACCAGAAGGCGCAGTTATT
TTCCGAGATGATGCAGATATTCTTGGCCGAGTAAAAAGAATTGTATCTGGTATGAGGTGG
AAAACAAAAATGGTAGATCATGAGGATGGTCCTCTTATCTCTAAAAAGGTATTGTTTGCT
GTCAAAAGATACTGGGTTGTTGGAGATAACAACTCAACCATCTTACGGTGA