Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050225
CDS Infomation

pacid=37462343 polypeptide=PGSC0003DMP400033900 locus=PGSC0003DMG400019505 ID=PGSC0003DMT400050225.v4.03 annot-version=v4.03
Sequence

ATGAAGCGATCCAAGAAAACCTTCAATGATCAGCAAGTTTCTACTGATCGCGAATCAGGT
GCTGTTTTGAAGAATTCAGAGTTGAAATGGGGTCCGAATCCAATGACACTCGTGGGTTTT
ATAGTTGTTCTCTTGATGGTTCTTACGGTTGTTTTCTCAGTTGCATTCTTTTTCGGGGAC
TTACCTTCTGATTGCTTGTGGACTTTGGCTGAAGCTAGAATTTTTCATGTTAAACATTCA
AAAGCCACAGTATCTGAAAAGGATATTCTGCAGCCACTGACAGTGCCAAAAGATGATAAA
CTACTTGGTGGTCTTCTTCCTACTGGATTTGATGAAACATCTTGTTTGAGTAGGTATGAA
TCACACTTATATAGCAAACCTCTGCAGCATAAGCCTTCCTCTTATCTTATCTCGGGGTTA
AGAAGATACGAAGCTCTTCACAAGCAATGCGGACCTTACACAGAATTATACAACAAAACA
GTAGACCTTATAAAGTCCGGTGAATACAGCAGTGGTTCTTCAGTTTGTAATTACGTTGTT
TGGATATCGTATAGTGGTTTAGGGAACAGAATACTAACCTTAACTTCTGCTTTCCTTTAT
GCTCTACTCACAAATAGAGTCCTTCTGGTTGACCCCAGAGCTAATTTGCATAACCTGTTT
TGTGAACCTTTTCCTGAAGTTTCTTGGTTGCTTCCTCCAGATTTTCCTATTATTGATCAG
TTTAGTAGCTTTAATCAGAAATCTCCACATTCCTATGGTTATATGGTGAGAAATAATGTC
ACAGGCAAGTCAAGAATACCTTCATTCCTCTACCTTCATTTATCTCATGACTTTGATGTG
CAAGATAAATTATTCTTCTGTGACACTGACCAAACTTTTCTCCACAAAGTCCCTTGGCTA
TTTGTGAAGTCAAATAACTATTATGTTCCTGCTCTTTTCTTGATCCCATCGTTCGAGCAA
GAGTTAAACAATCTTTTTCCAGAGAAAGAAACTGTCTTCCACTTCTTGGGTAAGTACCTT
TTCCATCCAACAAATTCTGTATGGGGGCTTATTACTAGGTACTATCAAGCTTATTTAGCT
CAAGCAGATGAAAAAATAGGCATTCAAATTAGAGTTTTCAGTTTAGGTGTAAGCAATTTT
AAGTATGTGTTGAATCAAATATTAGCTTGTGCAACAAAGGAGAATCTGTTACCACAGGTT
AACCTGAATGAGCCTATAGTCAATTATTCTAGCAAGACGAAGACTATAAGCGTCTTGATG
ACATCTCTGAGTTCACAATACTTCGAGGAGATTAGGAACATGTATTGGCAGAATCCTACT
GTAACAGGAGAGATTGTTACTGTTTTTCAGCCAAGTCATGAAGAGCATCAACAAACTGAG
AAGCTGATGCATGACAGAAAGGCCTTGGCAGAAATGTATTTGCTGAGTTTAACTGATAAA
TTGGTTACAAGTGGATGGTCCACTTTTGGTTATGTGGCTTATAGTCTTGGAGGTTTGAAG
CCATGGATTTTATACAAGTTTAAAAAAGGGACAGTCCATGATCCGCCTTGTTTTCGAGCT
ACGTCTTTGGAGCCATGTTATCATTCTCCCCCTTACTACGATTGCAAGAAGAAAACAGCA
AGTAATAACACAGTTAACATTGTTCCTCATGTGAGACATTGTGAGGATAATAGCTGGGGT
TTGAAGTTATTCGATCAAAAAGGTGAATTGTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400033900
PEP Infomation

pacid=37462343 transcript=PGSC0003DMT400050225 locus=PGSC0003DMG400019505 ID=PGSC0003DMT400050225.v4.03 annot-version=v4.03
Sequence

MKRSKKTFNDQQVSTDRESGAVLKNSELKWGPNPMTLVGFIVVLLMVLTVVFSVAFFFGD
LPSDCLWTLAEARIFHVKHSKATVSEKDILQPLTVPKDDKLLGGLLPTGFDETSCLSRYE
SHLYSKPLQHKPSSYLISGLRRYEALHKQCGPYTELYNKTVDLIKSGEYSSGSSVCNYVV
WISYSGLGNRILTLTSAFLYALLTNRVLLVDPRANLHNLFCEPFPEVSWLLPPDFPIIDQ
FSSFNQKSPHSYGYMVRNNVTGKSRIPSFLYLHLSHDFDVQDKLFFCDTDQTFLHKVPWL
FVKSNNYYVPALFLIPSFEQELNNLFPEKETVFHFLGKYLFHPTNSVWGLITRYYQAYLA
QADEKIGIQIRVFSLGVSNFKYVLNQILACATKENLLPQVNLNEPIVNYSSKTKTISVLM
TSLSSQYFEEIRNMYWQNPTVTGEIVTVFQPSHEEHQQTEKLMHDRKALAEMYLLSLTDK
LVTSGWSTFGYVAYSLGGLKPWILYKFKKGTVHDPPCFRATSLEPCYHSPPYYDCKKKTA
SNNTVNIVPHVRHCEDNSWGLKLFDQKGELL*

Transcript Sequence

Transcript ID

PGSC0003DMT400050225
Transcript Infomation

pacid=37462343 locus=PGSC0003DMG400019505 ID=PGSC0003DMT400050225.v4.03 annot-version=v4.03
Sequence

ATGAAGCGATCCAAGAAAACCTTCAATGATCAGCAAGTTTCTACTGATCGCGAATCAGGT
GCTGTTTTGAAGAATTCAGAGTTGAAATGGGGTCCGAATCCAATGACACTCGTGGGTTTT
ATAGTTGTTCTCTTGATGGTTCTTACGGTTGTTTTCTCAGTTGCATTCTTTTTCGGGGAC
TTACCTTCTGATTGCTTGTGGACTTTGGCTGAAGCTAGAATTTTTCATGTTAAACATTCA
AAAGCCACAGTATCTGAAAAGGATATTCTGCAGCCACTGACAGTGCCAAAAGATGATAAA
CTACTTGGTGGTCTTCTTCCTACTGGATTTGATGAAACATCTTGTTTGAGTAGGTATGAA
TCACACTTATATAGCAAACCTCTGCAGCATAAGCCTTCCTCTTATCTTATCTCGGGGTTA
AGAAGATACGAAGCTCTTCACAAGCAATGCGGACCTTACACAGAATTATACAACAAAACA
GTAGACCTTATAAAGTCCGGTGAATACAGCAGTGGTTCTTCAGTTTGTAATTACGTTGTT
TGGATATCGTATAGTGGTTTAGGGAACAGAATACTAACCTTAACTTCTGCTTTCCTTTAT
GCTCTACTCACAAATAGAGTCCTTCTGGTTGACCCCAGAGCTAATTTGCATAACCTGTTT
TGTGAACCTTTTCCTGAAGTTTCTTGGTTGCTTCCTCCAGATTTTCCTATTATTGATCAG
TTTAGTAGCTTTAATCAGAAATCTCCACATTCCTATGGTTATATGGTGAGAAATAATGTC
ACAGGCAAGTCAAGAATACCTTCATTCCTCTACCTTCATTTATCTCATGACTTTGATGTG
CAAGATAAATTATTCTTCTGTGACACTGACCAAACTTTTCTCCACAAAGTCCCTTGGCTA
TTTGTGAAGTCAAATAACTATTATGTTCCTGCTCTTTTCTTGATCCCATCGTTCGAGCAA
GAGTTAAACAATCTTTTTCCAGAGAAAGAAACTGTCTTCCACTTCTTGGGTAAGTACCTT
TTCCATCCAACAAATTCTGTATGGGGGCTTATTACTAGGTACTATCAAGCTTATTTAGCT
CAAGCAGATGAAAAAATAGGCATTCAAATTAGAGTTTTCAGTTTAGGTGTAAGCAATTTT
AAGTATGTGTTGAATCAAATATTAGCTTGTGCAACAAAGGAGAATCTGTTACCACAGGTT
AACCTGAATGAGCCTATAGTCAATTATTCTAGCAAGACGAAGACTATAAGCGTCTTGATG
ACATCTCTGAGTTCACAATACTTCGAGGAGATTAGGAACATGTATTGGCAGAATCCTACT
GTAACAGGAGAGATTGTTACTGTTTTTCAGCCAAGTCATGAAGAGCATCAACAAACTGAG
AAGCTGATGCATGACAGAAAGGCCTTGGCAGAAATGTATTTGCTGAGTTTAACTGATAAA
TTGGTTACAAGTGGATGGTCCACTTTTGGTTATGTGGCTTATAGTCTTGGAGGTTTGAAG
CCATGGATTTTATACAAGTTTAAAAAAGGGACAGTCCATGATCCGCCTTGTTTTCGAGCT
ACGTCTTTGGAGCCATGTTATCATTCTCCCCCTTACTACGATTGCAAGAAGAAAACAGCA
AGTAATAACACAGTTAACATTGTTCCTCATGTGAGACATTGTGAGGATAATAGCTGGGGT
TTGAAGTTATTCGATCAAAAAGGTGAATTGTTGTAA