Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050200
CDS Infomation

pacid=37467220 polypeptide=PGSC0003DMP400033882 locus=PGSC0003DMG400019492 ID=PGSC0003DMT400050200.v4.03 annot-version=v4.03
Sequence

ATGGATTCCAAAGGCATCAATCTTTCAGCTCTTGCACTTTTTGTTTGCCTCATTTTATCA
TTTTCATCCTCCATTCTTGCCTATCGAACCCCATATTGGCCATCGATTAAAGTAGGTTAC
TATAGATATACTTGCCCCTATGCCGAACACATTGTTCAAAATGTTGTAAACAGAGCTGTC
TCTCTTAATCCAGGCATTGCTGCTGGCCTTATCAGATTACATTTCCACGATTGCTTTGTC
AGGGGGTGTGATGCATCTGTGTTATTGGATGGACCGAACTCCGAGAAGGAAGGTATTCCC
AACAAGAACAGTTTAAGAGGCTTTGAGGTAATTGATGCTGCAAAAGCTGCACTTGAAGCT
GCATGCCCTGGAGTCGTTTCGTGCGCAGATATAGTTGCATTTGCTGCTCGGGACAGTTCT
TACAAAGTTGGGAGAATATACTATGATGTCCAAGCTGGACGTCGTGATGGTCGTGTTTCT
ATTGACTCTGAAACATTGACTAATCTTCCTTCTCCTTTCGTCAATGCCACGGAACTCATC
AAGAATTTTGCAAGGAAAGGTATGTCGGTTGATGAAATGGTGACTCTCTCTGGCGCGCAT
TCCATTGGTATTGCACATTGCGGTGTTTTTGCTAGCCGTTTGTACCCTCAAAACAATCAA
CAAAATCTTCCAATTGATCCTGAATACGCGGACTTCTTGAAGTCCATTTGTCCACCAGAA
GCACTTACAAATGGGACGGGAGCTGCTAATCCCGCGAACCTTGATGCCCTGACACCAAAC
AGATTGGATAACAGATATTACTTGGCTTTAAAGAGTCAAAAGGGACTTATGATTTCTGAT
CAGGCATTGTTGGCAAACCCGACAACAGCTAAATTGGTGAACTATAATGCTAGATTTGGT
TCAATTTGGTCAAGGAAGTTTGAATCTGCAATGATTCACATGGGAACTTTGGATGTCCTC
ACAGGTCGAAACGGGGAGATCAGAAGGAACTGTCATTTCGTGAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400033882
PEP Infomation

pacid=37467220 transcript=PGSC0003DMT400050200 locus=PGSC0003DMG400019492 ID=PGSC0003DMT400050200.v4.03 annot-version=v4.03
Sequence

MDSKGINLSALALFVCLILSFSSSILAYRTPYWPSIKVGYYRYTCPYAEHIVQNVVNRAV
SLNPGIAAGLIRLHFHDCFVRGCDASVLLDGPNSEKEGIPNKNSLRGFEVIDAAKAALEA
ACPGVVSCADIVAFAARDSSYKVGRIYYDVQAGRRDGRVSIDSETLTNLPSPFVNATELI
KNFARKGMSVDEMVTLSGAHSIGIAHCGVFASRLYPQNNQQNLPIDPEYADFLKSICPPE
ALTNGTGAANPANLDALTPNRLDNRYYLALKSQKGLMISDQALLANPTTAKLVNYNARFG
SIWSRKFESAMIHMGTLDVLTGRNGEIRRNCHFVN*

Transcript Sequence

Transcript ID

PGSC0003DMT400050200
Transcript Infomation

pacid=37467220 locus=PGSC0003DMG400019492 ID=PGSC0003DMT400050200.v4.03 annot-version=v4.03
Sequence

ATGGATTCCAAAGGCATCAATCTTTCAGCTCTTGCACTTTTTGTTTGCCTCATTTTATCA
TTTTCATCCTCCATTCTTGCCTATCGAACCCCATATTGGCCATCGATTAAAGTAGGTTAC
TATAGATATACTTGCCCCTATGCCGAACACATTGTTCAAAATGTTGTAAACAGAGCTGTC
TCTCTTAATCCAGGCATTGCTGCTGGCCTTATCAGATTACATTTCCACGATTGCTTTGTC
AGGGGGTGTGATGCATCTGTGTTATTGGATGGACCGAACTCCGAGAAGGAAGGTATTCCC
AACAAGAACAGTTTAAGAGGCTTTGAGGTAATTGATGCTGCAAAAGCTGCACTTGAAGCT
GCATGCCCTGGAGTCGTTTCGTGCGCAGATATAGTTGCATTTGCTGCTCGGGACAGTTCT
TACAAAGTTGGGAGAATATACTATGATGTCCAAGCTGGACGTCGTGATGGTCGTGTTTCT
ATTGACTCTGAAACATTGACTAATCTTCCTTCTCCTTTCGTCAATGCCACGGAACTCATC
AAGAATTTTGCAAGGAAAGGTATGTCGGTTGATGAAATGGTGACTCTCTCTGGCGCGCAT
TCCATTGGTATTGCACATTGCGGTGTTTTTGCTAGCCGTTTGTACCCTCAAAACAATCAA
CAAAATCTTCCAATTGATCCTGAATACGCGGACTTCTTGAAGTCCATTTGTCCACCAGAA
GCACTTACAAATGGGACGGGAGCTGCTAATCCCGCGAACCTTGATGCCCTGACACCAAAC
AGATTGGATAACAGATATTACTTGGCTTTAAAGAGTCAAAAGGGACTTATGATTTCTGAT
CAGGCATTGTTGGCAAACCCGACAACAGCTAAATTGGTGAACTATAATGCTAGATTTGGT
TCAATTTGGTCAAGGAAGTTTGAATCTGCAATGATTCACATGGGAACTTTGGATGTCCTC
ACAGGTCGAAACGGGGAGATCAGAAGGAACTGTCATTTCGTGAACTAA