Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050183
CDS Infomation

pacid=37466850 polypeptide=PGSC0003DMP400033871 locus=PGSC0003DMG400019483 ID=PGSC0003DMT400050183.v4.03 annot-version=v4.03
Sequence

ATGGAGGCCAAGAAAAACACCATTAGTATACTTATGTTACCATGGCTAGCCCATGGTCAC
ATAAGTCCATTTTTAGAACTAGCCAAAAAACTCACAAATAGAAATTTCCATATTTACTTA
TGTTCCACTCCAATAAACCTAAGTTCCATCAAGAAAAATGTCACAAAAAAATATTGTGAA
TCAATAGAATTAGTTGAGCTTCATCTTCCATCTTTACCAAATCTTCCTCCTCATTACCAC
ACCACCAATGGCCTCCCTCCCCATCTCATGAACACCCTAAAAAAAGCATTCGAAAACGCC
TCTCCAAATTTTTCCAAAATATTACAAACTCTTAATCCAGACTTAGTCATTTATGACTTC
AATCAACCATGGGCTGCTGAGTTCGCGTCCTCTATGAACATTCCTGCCATACAATTCCTC
ACTTTTAGCGCGGCTATTGTTGCTTTATTAGCACTCCACATCATGTTTGATAAGTCGGGA
GAAAAATTTCCATTTCCTGAAATTTACCTGCGTGAACATGAGATGCTTCAAATCAAGAAA
TCATTAGAAGAATCCAAAGATGAGAATTATAAGGACCCATTCAATGATGCTCTTAGACTA
TCTCGTGATATTGTTTTGGTGAAAACCTCTAGAGATTTCGAAGGTAAATATATAGATTAT
CTCTCAAAATTAGTTTCCAAGAAAATTGTTCCTGTTGGATCGCTAGTTCAAGATTCCATT
GATCAAGATCATGATCATGAGGAGATCATCATGCAGTGGCTTGACAAGAAAGAAAAATGT
TCAAGTGTGTTTGTGTCATTTGGGAGTGAGTATTTTCTATCAAAGGAAGAAATGCATGAA
GTAGCACAAGGGCTAGAGTTTAGCAAAGTAAACTTCATTTGGGTAATTAGGTTTCCACAA
GGTGAAAAAAATAGTATTCAAGATGTATTACCACAAGGATTTTTAGAAAGGGTAGGGGAA
AGAGGAATGGTTTTGGAAAAATGGGCTCCACAAGCCGCAATTCTACAACACAGGAGTACT
GGTGGATTCGTGAGTCATTGTGGATGGAGTTCTGTTATGGAAAGTATGAAGTTTGGTGTG
CCTATAATTGCAATGCCAATGCACATTGACCAACCAATGAATGCTAGGATTGTGGAATAT
ATTGGTATGGGAGTTGAAGCATTGAGGGATGAGAATGGGAAGTTACAAAGCGAAGAAATT
GCAAAAGTGATGAGGGAAGTGGTAATTGAAGAAAGTGGTGAAGGTGTGAGGAAGAAAACT
AAAGAATTGAGTGAGAAAATGAATATGAAAGGGGATGAAGAGATAGATGGAGTAGTGGAG
GAGTTGGTTGCACTTTGTAACAACAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400033871
PEP Infomation

pacid=37466850 transcript=PGSC0003DMT400050183 locus=PGSC0003DMG400019483 ID=PGSC0003DMT400050183.v4.03 annot-version=v4.03
Sequence

MEAKKNTISILMLPWLAHGHISPFLELAKKLTNRNFHIYLCSTPINLSSIKKNVTKKYCE
SIELVELHLPSLPNLPPHYHTTNGLPPHLMNTLKKAFENASPNFSKILQTLNPDLVIYDF
NQPWAAEFASSMNIPAIQFLTFSAAIVALLALHIMFDKSGEKFPFPEIYLREHEMLQIKK
SLEESKDENYKDPFNDALRLSRDIVLVKTSRDFEGKYIDYLSKLVSKKIVPVGSLVQDSI
DQDHDHEEIIMQWLDKKEKCSSVFVSFGSEYFLSKEEMHEVAQGLEFSKVNFIWVIRFPQ
GEKNSIQDVLPQGFLERVGERGMVLEKWAPQAAILQHRSTGGFVSHCGWSSVMESMKFGV
PIIAMPMHIDQPMNARIVEYIGMGVEALRDENGKLQSEEIAKVMREVVIEESGEGVRKKT
KELSEKMNMKGDEEIDGVVEELVALCNNK*

Transcript Sequence

Transcript ID

PGSC0003DMT400050183
Transcript Infomation

pacid=37466850 locus=PGSC0003DMG400019483 ID=PGSC0003DMT400050183.v4.03 annot-version=v4.03
Sequence

ATGGAGGCCAAGAAAAACACCATTAGTATACTTATGTTACCATGGCTAGCCCATGGTCAC
ATAAGTCCATTTTTAGAACTAGCCAAAAAACTCACAAATAGAAATTTCCATATTTACTTA
TGTTCCACTCCAATAAACCTAAGTTCCATCAAGAAAAATGTCACAAAAAAATATTGTGAA
TCAATAGAATTAGTTGAGCTTCATCTTCCATCTTTACCAAATCTTCCTCCTCATTACCAC
ACCACCAATGGCCTCCCTCCCCATCTCATGAACACCCTAAAAAAAGCATTCGAAAACGCC
TCTCCAAATTTTTCCAAAATATTACAAACTCTTAATCCAGACTTAGTCATTTATGACTTC
AATCAACCATGGGCTGCTGAGTTCGCGTCCTCTATGAACATTCCTGCCATACAATTCCTC
ACTTTTAGCGCGGCTATTGTTGCTTTATTAGCACTCCACATCATGTTTGATAAGTCGGGA
GAAAAATTTCCATTTCCTGAAATTTACCTGCGTGAACATGAGATGCTTCAAATCAAGAAA
TCATTAGAAGAATCCAAAGATGAGAATTATAAGGACCCATTCAATGATGCTCTTAGACTA
TCTCGTGATATTGTTTTGGTGAAAACCTCTAGAGATTTCGAAGGTAAATATATAGATTAT
CTCTCAAAATTAGTTTCCAAGAAAATTGTTCCTGTTGGATCGCTAGTTCAAGATTCCATT
GATCAAGATCATGATCATGAGGAGATCATCATGCAGTGGCTTGACAAGAAAGAAAAATGT
TCAAGTGTGTTTGTGTCATTTGGGAGTGAGTATTTTCTATCAAAGGAAGAAATGCATGAA
GTAGCACAAGGGCTAGAGTTTAGCAAAGTAAACTTCATTTGGGTAATTAGGTTTCCACAA
GGTGAAAAAAATAGTATTCAAGATGTATTACCACAAGGATTTTTAGAAAGGGTAGGGGAA
AGAGGAATGGTTTTGGAAAAATGGGCTCCACAAGCCGCAATTCTACAACACAGGAGTACT
GGTGGATTCGTGAGTCATTGTGGATGGAGTTCTGTTATGGAAAGTATGAAGTTTGGTGTG
CCTATAATTGCAATGCCAATGCACATTGACCAACCAATGAATGCTAGGATTGTGGAATAT
ATTGGTATGGGAGTTGAAGCATTGAGGGATGAGAATGGGAAGTTACAAAGCGAAGAAATT
GCAAAAGTGATGAGGGAAGTGGTAATTGAAGAAAGTGGTGAAGGTGTGAGGAAGAAAACT
AAAGAATTGAGTGAGAAAATGAATATGAAAGGGGATGAAGAGATAGATGGAGTAGTGGAG
GAGTTGGTTGCACTTTGTAACAACAAATGA