Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050061
CDS Infomation

pacid=37436553 polypeptide=PGSC0003DMP400033803 locus=PGSC0003DMG400019444 ID=PGSC0003DMT400050061.v4.03 annot-version=v4.03
Sequence

ATGGATCGTGGAAAAAGGCCAGACAGATCTCTTGCTGCGCTGAATAGTAAGATGTATATG
GATCTTAAGGACATCATCAGGGAACATTCCCTTTCATTTCTTCCTGCCAAATCACTTTTC
AAATTCAACGCTGTTTGTAGGGACTGGAAACTCCAGATTTCGAGTCCATTTTTTGCCCAT
AATCAGTCACTTTTTTGTCGCAGTACTTCAGGCTTCTTTATCCATTCACTTGATGGTTCT
CCTTCTCTCATACCCATCGACCCAAGCTTTTGTGGGGTGCCAGATCCATTACTTAAGTTT
TTGCCTGAGCCTGTTGACATTAGGTCCTCCTCAAATGGACTGCTTTGCTGCCAAGGTCGT
GCAGAGGACAAGGCCTACTACATATGTAATCCTGTTACTCAGCAGTGGAAGAAACTTCCA
AAATCAAATGTGAATCATGGACCAGATCCAGCAATTGTGCTCATATTCGAACCATCATTG
CTCAACTTTGTAGCTGAGTACAAAATTATATGCGCTTTTCGATCCACAGATTTTGGTGAT
GCAGTTGAGTTTGATATCTATTCCTCCAAAGGGAATTCTTGGGAAGTTGCTGGGGAGATC
CATTTTGGAGCTAGAGCAACACGTATGCCAAATCCAAAATCAGGGGTTCATGTGAATGGT
GTTGTTTACTGGATGACAATTTCAGGTAGTATTCTTGCTTTTGATCTAACAAAGGAGAGG
TCACAGCTCCTTCAAAACCATGATTCTCGTGGGATTTTGGGGGAGTTTAGTGGAAAGCTC
TGTAAGATGAACGTCTTTGGTAATTCAATCAGTTTAAGCATTTTGGATAATGTCCACTCA
AATACAATGCAAATGGGAAGCAAAACCAAAATGTGGGCAGGAAAACAGCAGGTTGTTCTT
GACAGTAATATTGTTGGGAATGTAGCAGGGGACTACTCAGTTTTACACGTCGACAGTAAT
ATGTTGGTGGTTCGGAGCCAGGGAAAAGCCTTTTGGTATGATTTCAAGTCTCGTGCAACA
AAATGCATTCCGGGTGAATTTCATAATTCGAGATGCTTTCCCTACGTCAACAGCTTAGTC
TCCCTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400033803
PEP Infomation

pacid=37436553 transcript=PGSC0003DMT400050061 locus=PGSC0003DMG400019444 ID=PGSC0003DMT400050061.v4.03 annot-version=v4.03
Sequence

MDRGKRPDRSLAALNSKMYMDLKDIIREHSLSFLPAKSLFKFNAVCRDWKLQISSPFFAH
NQSLFCRSTSGFFIHSLDGSPSLIPIDPSFCGVPDPLLKFLPEPVDIRSSSNGLLCCQGR
AEDKAYYICNPVTQQWKKLPKSNVNHGPDPAIVLIFEPSLLNFVAEYKIICAFRSTDFGD
AVEFDIYSSKGNSWEVAGEIHFGARATRMPNPKSGVHVNGVVYWMTISGSILAFDLTKER
SQLLQNHDSRGILGEFSGKLCKMNVFGNSISLSILDNVHSNTMQMGSKTKMWAGKQQVVL
DSNIVGNVAGDYSVLHVDSNMLVVRSQGKAFWYDFKSRATKCIPGEFHNSRCFPYVNSLV
SL*

Transcript Sequence

Transcript ID

PGSC0003DMT400050061
Transcript Infomation

pacid=37436553 locus=PGSC0003DMG400019444 ID=PGSC0003DMT400050061.v4.03 annot-version=v4.03
Sequence

ATGGATCGTGGAAAAAGGCCAGACAGATCTCTTGCTGCGCTGAATAGTAAGATGTATATG
GATCTTAAGGACATCATCAGGGAACATTCCCTTTCATTTCTTCCTGCCAAATCACTTTTC
AAATTCAACGCTGTTTGTAGGGACTGGAAACTCCAGATTTCGAGTCCATTTTTTGCCCAT
AATCAGTCACTTTTTTGTCGCAGTACTTCAGGCTTCTTTATCCATTCACTTGATGGTTCT
CCTTCTCTCATACCCATCGACCCAAGCTTTTGTGGGGTGCCAGATCCATTACTTAAGTTT
TTGCCTGAGCCTGTTGACATTAGGTCCTCCTCAAATGGACTGCTTTGCTGCCAAGGTCGT
GCAGAGGACAAGGCCTACTACATATGTAATCCTGTTACTCAGCAGTGGAAGAAACTTCCA
AAATCAAATGTGAATCATGGACCAGATCCAGCAATTGTGCTCATATTCGAACCATCATTG
CTCAACTTTGTAGCTGAGTACAAAATTATATGCGCTTTTCGATCCACAGATTTTGGTGAT
GCAGTTGAGTTTGATATCTATTCCTCCAAAGGGAATTCTTGGGAAGTTGCTGGGGAGATC
CATTTTGGAGCTAGAGCAACACGTATGCCAAATCCAAAATCAGGGGTTCATGTGAATGGT
GTTGTTTACTGGATGACAATTTCAGGTAGTATTCTTGCTTTTGATCTAACAAAGGAGAGG
TCACAGCTCCTTCAAAACCATGATTCTCGTGGGATTTTGGGGGAGTTTAGTGGAAAGCTC
TGTAAGATGAACGTCTTTGGTAATTCAATCAGTTTAAGCATTTTGGATAATGTCCACTCA
AATACAATGCAAATGGGAAGCAAAACCAAAATGTGGGCAGGAAAACAGCAGGTTGTTCTT
GACAGTAATATTGTTGGGAATGTAGCAGGGGACTACTCAGTTTTACACGTCGACAGTAAT
ATGTTGGTGGTTCGGAGCCAGGGAAAAGCCTTTTGGTATGATTTCAAGTCTCGTGCAACA
AAATGCATTCCGGGTGAATTTCATAATTCGAGATGCTTTCCCTACGTCAACAGCTTAGTC
TCCCTCTAG