Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400050007
CDS Infomation

pacid=37439420 polypeptide=PGSC0003DMP400033759 locus=PGSC0003DMG400019430 ID=PGSC0003DMT400050007.v4.03 annot-version=v4.03
Sequence

ATGGCAAAGTTTAAGCGGACAGACACCAACAGAAGCTTAGAAACTTTGTTGGATTTGGAC
AAATCTGCACAGTTGAATAAGATTAATGGTGTTAATTTGGCGAAGCAGCCAACGCGCAAG
CTAATTCCAGGACATGGTCTTGAGTTCACTAATCTGTCATATAGTGTTACCAAGAAAGTG
AAAAAAGATGGTGTTTGGATCAACAGAGAAGCTTATCTTCTTAATGATATATCAGGACAA
GCTTTACGAGGCGAAATCATGGCCATCATGGGGCCTAGTGGTGCTGGAAAATCTACTTTT
CTTGATGCCATTGCTGGACGAATTGCTCGTGGTAGCCTTGAAGGAACTGTTAGAATTGAT
GGCAAATCAGTGACAACAAGTTATATGAAGATGATATCTTCCTATGTAATGCAAGATGAT
CAGCTCTTTCCTATGTTGACAGTTTACGAGACGTTCATGTTTGCAGCTGAAGTCAGGCTT
CCACCATCAATATCTAGAGCAGAGAAGAAGAAAAGAGTTCATGAACTTCTCGAGCAATTA
GGCTTAACGAGTGCAACACACACGTACATAGGAGATGAAGGAAGAAGAGGAGTGTCAGGG
GGAGAACGTCGGAGAGTGTCTATAGGGATTGACATAATCCATAAGCCATCTCTGCTGTTT
CTCGACGAGCCTACATCTGGTCTTGATTCTACAAGTGCTTATAGTGTTGTTGAAAAAGTG
AAAGACATAGCTAAAAGTGGTAGTATAGTACTCATGACAATCCACCAGCCTTCTTTCAGA
ATCCAAATGCTCCTTGATCGCATCACAGTCCTTGCTAGGGGAAGGCTTGTATATTTGGGA
AGTCCAACAGGAGTAGCAGCTTTTCTAGCTGGTTTTGCAAGACCAGTTCCAGATGGCGAA
AACAGCTTAGAGTACCTATTAGATGTGATCAAAGAGTATGATGAATCAACTGTTGGACTT
GATCCTCTTGTCTTGTATCAAAGGGATGGCATCAAACCTGATCAAACAGCTAAAACCCCT
CTCCGAAAACCACCAAAAACACCAAGAGCTCCTCGAACTCCTTATGCAAAGTCACCCTGG
ACCAAACATATTAGCCTCCGAAGCTCTCATTTTTCTGTTGGAAACATGAATTCTCAACGA
GATCCTAAGGATCAGTCTGAATCTAATGTTGATAGTTTCGGTTATGATGACGAGGACGAT
GAGGAGGATTTTGATAACTCATTGGAACGTAAGGTTCCTCAAACGCCTATGAGTATGCAG
AGTGGGATTCATCCACGTTTGGCTTCACATTTCTACAAAGATTTCTCCGTTTGGCTATAC
AATGGCGTTAAAGGTACTCCTCTTCGTCCACCAACATGGAACCATGGAGGAAGAACACAA
ATTTCTGGTGCAAAATCGAGCATGTCTTCAGGTCATCCATTCCCAATGTCTCAACAAACA
CCTTCACGTGTTAAAACTCCAGTAGTATCAGCAATTTTCACTCCAGGACGAGAAGGAATA
GAGTACTCATCGTATAATCCATCATACGAAGAAGTATTTGAAATCGAAGAAGTACTCGAT
GAACCAGTTCACAGGCACAAATTCGCAAATCCCTGGCTTAGAGAAGTTATAGTCCTCTGT
TGGCGTACCACATTGAATGTAATTCGTACTCCTGAACTCTTCCTATCTCGTGAAATCGTC
TTAACAGTCATGGGACTAGTCCTGTCTTCTTTCTTCCGAAGACTAGATCATTTCGACTTC
ACAACAATCAATCACCTCCTCAACTTCTACATCTTCACAATTTGCCTAGTCTTTTTCTCC
TCGAACGATGCTGTCCCAACGTTCATACAAGAGCGATTCATCTTCATTCGCGAGACATCT
CACAACGCTTATAGAGCATCTTCTTATGTCATTTCCTCCCTCATAGTATACCTCCCCTTT
TTTGCGATCCAAGCATTCACATTCGCTGCCATAACACAATACATTCTTAGAATCAACAGC
AGCATTTTAAGCTTCTGGATAATCCTCTATTCCTCACTCATAACTAGCAATGCTTATGTG
ATGTTAGTAAGTGCACTTGTTCCTAGTTACATCACGGGGTACGCGATCGTTATAGCTACA
ACAGCTCTCTTCTTCCTAACATGTGGATTTTTCTTGAAGAGGACTCAAATTCCTTTGGTT
TGGAGATGGTTACATTACATATCAGCAATCAAATATCCATTTGAAGCATTGTTAATTAAT
GAATTTAAAGGGACAAAAAATTGTTACAATGGTGACCTAGCTGATCTTTCACCTGGTCCT
TTAGGTGATGTGAAGATTAGTCAATTGCATAAGGATTCAATTGCTAGAGGTGATTTATCA
CAAAATTGCACATTGATTGGAGAAGATGTTTTGTTTTCTATGGACATTACAAAGGAGAAT
ATTTGGTTGGATATTGTCATCTTGTTGGCTTGGGGAGTTCTTTATCGTCTTTTCTTTTAT
TTAGTTCTTAGGTTTTACTCAAAGAATGAAAGAAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400033759
PEP Infomation

pacid=37439420 transcript=PGSC0003DMT400050007 locus=PGSC0003DMG400019430 ID=PGSC0003DMT400050007.v4.03 annot-version=v4.03
Sequence

MAKFKRTDTNRSLETLLDLDKSAQLNKINGVNLAKQPTRKLIPGHGLEFTNLSYSVTKKV
KKDGVWINREAYLLNDISGQALRGEIMAIMGPSGAGKSTFLDAIAGRIARGSLEGTVRID
GKSVTTSYMKMISSYVMQDDQLFPMLTVYETFMFAAEVRLPPSISRAEKKKRVHELLEQL
GLTSATHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAYSVVEKV
KDIAKSGSIVLMTIHQPSFRIQMLLDRITVLARGRLVYLGSPTGVAAFLAGFARPVPDGE
NSLEYLLDVIKEYDESTVGLDPLVLYQRDGIKPDQTAKTPLRKPPKTPRAPRTPYAKSPW
TKHISLRSSHFSVGNMNSQRDPKDQSESNVDSFGYDDEDDEEDFDNSLERKVPQTPMSMQ
SGIHPRLASHFYKDFSVWLYNGVKGTPLRPPTWNHGGRTQISGAKSSMSSGHPFPMSQQT
PSRVKTPVVSAIFTPGREGIEYSSYNPSYEEVFEIEEVLDEPVHRHKFANPWLREVIVLC
WRTTLNVIRTPELFLSREIVLTVMGLVLSSFFRRLDHFDFTTINHLLNFYIFTICLVFFS
SNDAVPTFIQERFIFIRETSHNAYRASSYVISSLIVYLPFFAIQAFTFAAITQYILRINS
SILSFWIILYSSLITSNAYVMLVSALVPSYITGYAIVIATTALFFLTCGFFLKRTQIPLV
WRWLHYISAIKYPFEALLINEFKGTKNCYNGDLADLSPGPLGDVKISQLHKDSIARGDLS
QNCTLIGEDVLFSMDITKENIWLDIVILLAWGVLYRLFFYLVLRFYSKNERK*

Transcript Sequence

Transcript ID

PGSC0003DMT400050007
Transcript Infomation

pacid=37439420 locus=PGSC0003DMG400019430 ID=PGSC0003DMT400050007.v4.03 annot-version=v4.03
Sequence

ATGGCAAAGTTTAAGCGGACAGACACCAACAGAAGCTTAGAAACTTTGTTGGATTTGGAC
AAATCTGCACAGTTGAATAAGATTAATGGTGTTAATTTGGCGAAGCAGCCAACGCGCAAG
CTAATTCCAGGACATGGTCTTGAGTTCACTAATCTGTCATATAGTGTTACCAAGAAAGTG
AAAAAAGATGGTGTTTGGATCAACAGAGAAGCTTATCTTCTTAATGATATATCAGGACAA
GCTTTACGAGGCGAAATCATGGCCATCATGGGGCCTAGTGGTGCTGGAAAATCTACTTTT
CTTGATGCCATTGCTGGACGAATTGCTCGTGGTAGCCTTGAAGGAACTGTTAGAATTGAT
GGCAAATCAGTGACAACAAGTTATATGAAGATGATATCTTCCTATGTAATGCAAGATGAT
CAGCTCTTTCCTATGTTGACAGTTTACGAGACGTTCATGTTTGCAGCTGAAGTCAGGCTT
CCACCATCAATATCTAGAGCAGAGAAGAAGAAAAGAGTTCATGAACTTCTCGAGCAATTA
GGCTTAACGAGTGCAACACACACGTACATAGGAGATGAAGGAAGAAGAGGAGTGTCAGGG
GGAGAACGTCGGAGAGTGTCTATAGGGATTGACATAATCCATAAGCCATCTCTGCTGTTT
CTCGACGAGCCTACATCTGGTCTTGATTCTACAAGTGCTTATAGTGTTGTTGAAAAAGTG
AAAGACATAGCTAAAAGTGGTAGTATAGTACTCATGACAATCCACCAGCCTTCTTTCAGA
ATCCAAATGCTCCTTGATCGCATCACAGTCCTTGCTAGGGGAAGGCTTGTATATTTGGGA
AGTCCAACAGGAGTAGCAGCTTTTCTAGCTGGTTTTGCAAGACCAGTTCCAGATGGCGAA
AACAGCTTAGAGTACCTATTAGATGTGATCAAAGAGTATGATGAATCAACTGTTGGACTT
GATCCTCTTGTCTTGTATCAAAGGGATGGCATCAAACCTGATCAAACAGCTAAAACCCCT
CTCCGAAAACCACCAAAAACACCAAGAGCTCCTCGAACTCCTTATGCAAAGTCACCCTGG
ACCAAACATATTAGCCTCCGAAGCTCTCATTTTTCTGTTGGAAACATGAATTCTCAACGA
GATCCTAAGGATCAGTCTGAATCTAATGTTGATAGTTTCGGTTATGATGACGAGGACGAT
GAGGAGGATTTTGATAACTCATTGGAACGTAAGGTTCCTCAAACGCCTATGAGTATGCAG
AGTGGGATTCATCCACGTTTGGCTTCACATTTCTACAAAGATTTCTCCGTTTGGCTATAC
AATGGCGTTAAAGGTACTCCTCTTCGTCCACCAACATGGAACCATGGAGGAAGAACACAA
ATTTCTGGTGCAAAATCGAGCATGTCTTCAGGTCATCCATTCCCAATGTCTCAACAAACA
CCTTCACGTGTTAAAACTCCAGTAGTATCAGCAATTTTCACTCCAGGACGAGAAGGAATA
GAGTACTCATCGTATAATCCATCATACGAAGAAGTATTTGAAATCGAAGAAGTACTCGAT
GAACCAGTTCACAGGCACAAATTCGCAAATCCCTGGCTTAGAGAAGTTATAGTCCTCTGT
TGGCGTACCACATTGAATGTAATTCGTACTCCTGAACTCTTCCTATCTCGTGAAATCGTC
TTAACAGTCATGGGACTAGTCCTGTCTTCTTTCTTCCGAAGACTAGATCATTTCGACTTC
ACAACAATCAATCACCTCCTCAACTTCTACATCTTCACAATTTGCCTAGTCTTTTTCTCC
TCGAACGATGCTGTCCCAACGTTCATACAAGAGCGATTCATCTTCATTCGCGAGACATCT
CACAACGCTTATAGAGCATCTTCTTATGTCATTTCCTCCCTCATAGTATACCTCCCCTTT
TTTGCGATCCAAGCATTCACATTCGCTGCCATAACACAATACATTCTTAGAATCAACAGC
AGCATTTTAAGCTTCTGGATAATCCTCTATTCCTCACTCATAACTAGCAATGCTTATGTG
ATGTTAGTAAGTGCACTTGTTCCTAGTTACATCACGGGGTACGCGATCGTTATAGCTACA
ACAGCTCTCTTCTTCCTAACATGTGGATTTTTCTTGAAGAGGACTCAAATTCCTTTGGTT
TGGAGATGGTTACATTACATATCAGCAATCAAATATCCATTTGAAGCATTGTTAATTAAT
GAATTTAAAGGGACAAAAAATTGTTACAATGGTGACCTAGCTGATCTTTCACCTGGTCCT
TTAGGTGATGTGAAGATTAGTCAATTGCATAAGGATTCAATTGCTAGAGGTGATTTATCA
CAAAATTGCACATTGATTGGAGAAGATGTTTTGTTTTCTATGGACATTACAAAGGAGAAT
ATTTGGTTGGATATTGTCATCTTGTTGGCTTGGGGAGTTCTTTATCGTCTTTTCTTTTAT
TTAGTTCTTAGGTTTTACTCAAAGAATGAAAGAAAATGA