Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049985
CDS Infomation

pacid=37477758 polypeptide=PGSC0003DMP400033742 locus=PGSC0003DMG400019418 ID=PGSC0003DMT400049985.v4.03 annot-version=v4.03
Sequence

ATGGCTGACCCTGTAATTGGTGCTACAGTTCAAGTTTTGCTTGAAAAGCTGCTTTCTCTC
ACTATTGAGAAAGTCAGTAGCTCAAGGGATTGCAACAAACATCTTAGAATAATGACACAA
GATGTATCCATCATTCAAGCGTTCATTCATGATGCTCAAAGACGACAAGTTGACAACGAT
CAGGCTGTGGAAAAATGGCTCATGAGGCTTGAGAGAGTTGCTGAAGATGCTGAAAATGTG
CTTGATGAATTCACATATGAATCTCTCAAAGCACAAGTCCGAAACAGTCCAATAAGAAAG
GTCAGTGGATTCTTTTCTCATCCTGCTTTTATAAGCAAAATATCTCGAAAAATCAAAAAC
ATAAATGAAGAGTTGAGGGCTATCAATCAGTTAGCCAAAGACCTTGGTCTCCAATCACTC
ATAGTTCCTTCTCAGCAAATAGTACCGATGATTCGAGAAACAGATTCCTTAGTAGTTGCT
TCAGATGTTGTTGGTAGAGACAACGATATTGCTGAAATTAAGGAGAAGATGTTGAACATG
AGAGAGGAAGTTGTACTGTGCGCCATTCCCATAGTCGGCATGGGGGGTTTAGGGAAAACT
ACTATTGCTAAGAGAATTTTCAATGATGAAGAGATCGAAAAACACTTTGAAAAGAGAGTT
TGGTTGTGCCTACCTGAAATGTCAGACACTAAGAGCTTTCTTGAACAGATCCTCCAATCA
ATGACGGAGCGAAAACTTGAGGTCCAAACCAGGGATATAATAGTGAAGAAACTCCGAGAT
GAACTAGGAGGAAAAAGATATTTGCTTGTCTTAGATGATTTGTGGCGTGTTGACCTTCCA
GTGTGGGATGAGTTCATGGACAGCTTGAGAGGAATAAACACTTCCAGAGGAAACTGCATT
CTTGTGACGACTCGTATGAAACTTGTGGCATCCACAGTAGCAGCAGTAGGTCCTCATATG
TTGGAAAAATTAACAAAAGATCATTGTTGGTCGATTTTCAAACAAAGAGCATTTGTTGAT
GGGGCAGTTCCGGAGGAAATAGTGAGCGTGAAGAACAGGATTGTTGAAATGTGTCAAGGT
CTACCGTTGGCAGCAAGTGTGTTGGGAGGCCTCTTGCGCAACAAGGAGAAACATGAATGG
TGGTCTATTCTTGATGGAAACCCCCTTGTTGCTGGTGAAGATGATAATGGAGAAAATAGC
TTAAAGAAAATCTTAAAACTCAGCTATGTTTATCTACCATCACCGTATCTAAAAAAATGT
TTTGCTTACTTTGCAATGTTTCCAAAAGATTTCTTGTTTGAAAAGGACCAACTTATCCAA
CTCTGGATGGCAGAAGGGTTTCTCCATCCATATCAAGAGATCACCGTGATGGAAGACGTT
GGGCACAAGTTTTTCCAAATCTTGTTGCGTAATTCCTTGCTGCAAGAGCTAGATGAGCAC
AACAATATAACATACTGTAAGATGCACGATCTTGTGCATGATTTGGCTGGAGATATCTTA
AAATCTAAACTATTTGATCCGAAGGGCAATGATGGAGAAAAACTTTCTCAAGTTCGATAC
TTTGGATGGGTCTCACCAAGTGATCAAATGGATATGATAAATGAGCCAGGACGTTTGTGC
ACATTGTTCTGGAAAAGCAATATATCTGATGATATGTTATTGAGCTTTCAGTTCTTGAGA
GTCTTAAATTTGTCCCAATCAGGCATCATGGAGTTGTCAGCCAAAATCAGCAAGCTAATA
TACTTGAGATATCTTGATCTCTCCAACACTAAGATCAGAGCCTTGCCCAACTCCATTTGC
AAGCTCTACAATTTGCAAACACTTAGAGTCAAAAACATTTTTTCATTCTGGAAGCTTCCA
GAAGAAATGGCAAATATGATAAGTTTGAGACACATAGATTGCAACTGGCATGACCTATTA
GGTATTCACATGCCACTTAATATGGGGCAATTGACTAGTCTTCAGACGCTACCGTTTTTC
AATGTAGGTTTAAAGAAGGGTTGTCGAATAGAAGAATTAGGTCGTTTGAAAAACCTTAGA
GGTGAATTGACAATCAGATGTCTCCAATTAGTCAAAAATAAAGAAGAGGCTCGAACAACA
TATTTACAGGAGAAACCAAATATCTACAGGCTGGCATATTTATGGTCCCTTAATGAATCA
GAAGGCTGTGAGATCAATCATGAGCATGTGTTGGATGGTCTTCAACCACATTCTAACTTG
AAAACCTTAGAAGTGGTGAACTATTTCGGGACTATATTTCCTTCATGGTTCACTGAAGGA
GAATTGATACCAAATTTGGTCAAGTTGATATTAAGTGGTTGCGAAAGGTGTAAAGAAATT
CCATCTCTTGGTCAACTGAAGTTCCTTCGGCATCTTGAGCTGATAGGATTCCTTGAATTG
AAATGCATCGGACCTACATTTTATGGTGTTGAGATCAATGATAATGGATCAAGCAGCAAT
AATGGCAATATCCATGTGTTCCCGTCATTGAAAGAACTAGTATTAGAGAATATGCGTAGC
CTTATTGAGTGGAAGGGAGATGAAGTTGGAGTAAGAATGTTTCCTAGGCTTGAGAAGTTG
ACGATTACAGGCTGTCCATTGTTAAAAAGTACTCCAACTCAATTTGAAATCCTGCGTGAA
TTAAAAATCAAAAGAGTTGACAGTGAATTGCCATTGTTGAACTTGTGCAGCAACTTAACA
TCTCTTGTGGATCTTTTTGTTGATCACGTGAAAGAGCTCACTTGTATACCCGATGAGATG
CTACGCAACAACATTTCTCTTCAACTCCTATCAGTCTCAAAATGTGGAGAGTTTCGTGAA
TTGCCACAAAGCTTGTACAATCTTAAGAACTTGCAAATATCCGACTGCCCCAATTTAACT
TCTGTTCCTGTTCCCAGTGGAGAGAATTATTTCAGTTCTCTAGAGGTTTTGTGTGTCTAC
CGTTGTGAGAACTTGGTTTCCTTGCCTTTACATGTGGGGGAAATGCCTTCACTTTCCTAT
TTGGATATATCAGAATGTCCCAAATTGATTAGTTTACCCTCAGGGGGCCTTCACCATCTC
ACTGGGTTAACGAATCTGGGAATCGGTCCTTTCTCAGAGATGGTGGATTTTGAGGCATTC
CAATTGATTTTTAATGGCATTCAGCAGCTGTTGTCCCTTCGTACATTGAACTTGTGGGGA
CACTTGCACTGGGATTCTCTGCCCTATCAGCTTATGCAACTCTCTTCCTTAGCAGACATC
CGTATATATGATTTCGGAATCGAGGCTCTTCCTCATAGATTTGGCAACCTTACTTCTCTT
GAATCATTGGGACTTACGAGGTGCAAACGGCTACGACATGTGGACTTCTCAGATGCCATG
CCCAAATTACGGTATCTGTCCATGAATGATTGTCCATTGTTAGAAGCTCTGTCGGATGGG
CTTGGCAACCTTGCTTCTTTGGAACATGTAACTTTGCAGAACTGCGAAAAACTAGAGCGT
CTGCCATCCAGAGATTCCATGCGACGCCTCACCAATTTAAGGTACCTCGACATTTATGGC
TGCCCACGGTTAGAAGAAAGTTGCACCAATAGGAGTGGCCGAAACTCCCAGTGGTCCAAC
ATTTCCCATATTCCACAAATTGAACTAGGCAGTCAGATAATTCAGGATAGACGTTACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400033742
PEP Infomation

pacid=37477758 transcript=PGSC0003DMT400049985 locus=PGSC0003DMG400019418 ID=PGSC0003DMT400049985.v4.03 annot-version=v4.03
Sequence

MADPVIGATVQVLLEKLLSLTIEKVSSSRDCNKHLRIMTQDVSIIQAFIHDAQRRQVDND
QAVEKWLMRLERVAEDAENVLDEFTYESLKAQVRNSPIRKVSGFFSHPAFISKISRKIKN
INEELRAINQLAKDLGLQSLIVPSQQIVPMIRETDSLVVASDVVGRDNDIAEIKEKMLNM
REEVVLCAIPIVGMGGLGKTTIAKRIFNDEEIEKHFEKRVWLCLPEMSDTKSFLEQILQS
MTERKLEVQTRDIIVKKLRDELGGKRYLLVLDDLWRVDLPVWDEFMDSLRGINTSRGNCI
LVTTRMKLVASTVAAVGPHMLEKLTKDHCWSIFKQRAFVDGAVPEEIVSVKNRIVEMCQG
LPLAASVLGGLLRNKEKHEWWSILDGNPLVAGEDDNGENSLKKILKLSYVYLPSPYLKKC
FAYFAMFPKDFLFEKDQLIQLWMAEGFLHPYQEITVMEDVGHKFFQILLRNSLLQELDEH
NNITYCKMHDLVHDLAGDILKSKLFDPKGNDGEKLSQVRYFGWVSPSDQMDMINEPGRLC
TLFWKSNISDDMLLSFQFLRVLNLSQSGIMELSAKISKLIYLRYLDLSNTKIRALPNSIC
KLYNLQTLRVKNIFSFWKLPEEMANMISLRHIDCNWHDLLGIHMPLNMGQLTSLQTLPFF
NVGLKKGCRIEELGRLKNLRGELTIRCLQLVKNKEEARTTYLQEKPNIYRLAYLWSLNES
EGCEINHEHVLDGLQPHSNLKTLEVVNYFGTIFPSWFTEGELIPNLVKLILSGCERCKEI
PSLGQLKFLRHLELIGFLELKCIGPTFYGVEINDNGSSSNNGNIHVFPSLKELVLENMRS
LIEWKGDEVGVRMFPRLEKLTITGCPLLKSTPTQFEILRELKIKRVDSELPLLNLCSNLT
SLVDLFVDHVKELTCIPDEMLRNNISLQLLSVSKCGEFRELPQSLYNLKNLQISDCPNLT
SVPVPSGENYFSSLEVLCVYRCENLVSLPLHVGEMPSLSYLDISECPKLISLPSGGLHHL
TGLTNLGIGPFSEMVDFEAFQLIFNGIQQLLSLRTLNLWGHLHWDSLPYQLMQLSSLADI
RIYDFGIEALPHRFGNLTSLESLGLTRCKRLRHVDFSDAMPKLRYLSMNDCPLLEALSDG
LGNLASLEHVTLQNCEKLERLPSRDSMRRLTNLRYLDIYGCPRLEESCTNRSGRNSQWSN
ISHIPQIELGSQIIQDRRY*

Transcript Sequence

Transcript ID

PGSC0003DMT400049985
Transcript Infomation

pacid=37477758 locus=PGSC0003DMG400019418 ID=PGSC0003DMT400049985.v4.03 annot-version=v4.03
Sequence

ATGGCTGACCCTGTAATTGGTGCTACAGTTCAAGTTTTGCTTGAAAAGCTGCTTTCTCTC
ACTATTGAGAAAGTCAGTAGCTCAAGGGATTGCAACAAACATCTTAGAATAATGACACAA
GATGTATCCATCATTCAAGCGTTCATTCATGATGCTCAAAGACGACAAGTTGACAACGAT
CAGGCTGTGGAAAAATGGCTCATGAGGCTTGAGAGAGTTGCTGAAGATGCTGAAAATGTG
CTTGATGAATTCACATATGAATCTCTCAAAGCACAAGTCCGAAACAGTCCAATAAGAAAG
GTCAGTGGATTCTTTTCTCATCCTGCTTTTATAAGCAAAATATCTCGAAAAATCAAAAAC
ATAAATGAAGAGTTGAGGGCTATCAATCAGTTAGCCAAAGACCTTGGTCTCCAATCACTC
ATAGTTCCTTCTCAGCAAATAGTACCGATGATTCGAGAAACAGATTCCTTAGTAGTTGCT
TCAGATGTTGTTGGTAGAGACAACGATATTGCTGAAATTAAGGAGAAGATGTTGAACATG
AGAGAGGAAGTTGTACTGTGCGCCATTCCCATAGTCGGCATGGGGGGTTTAGGGAAAACT
ACTATTGCTAAGAGAATTTTCAATGATGAAGAGATCGAAAAACACTTTGAAAAGAGAGTT
TGGTTGTGCCTACCTGAAATGTCAGACACTAAGAGCTTTCTTGAACAGATCCTCCAATCA
ATGACGGAGCGAAAACTTGAGGTCCAAACCAGGGATATAATAGTGAAGAAACTCCGAGAT
GAACTAGGAGGAAAAAGATATTTGCTTGTCTTAGATGATTTGTGGCGTGTTGACCTTCCA
GTGTGGGATGAGTTCATGGACAGCTTGAGAGGAATAAACACTTCCAGAGGAAACTGCATT
CTTGTGACGACTCGTATGAAACTTGTGGCATCCACAGTAGCAGCAGTAGGTCCTCATATG
TTGGAAAAATTAACAAAAGATCATTGTTGGTCGATTTTCAAACAAAGAGCATTTGTTGAT
GGGGCAGTTCCGGAGGAAATAGTGAGCGTGAAGAACAGGATTGTTGAAATGTGTCAAGGT
CTACCGTTGGCAGCAAGTGTGTTGGGAGGCCTCTTGCGCAACAAGGAGAAACATGAATGG
TGGTCTATTCTTGATGGAAACCCCCTTGTTGCTGGTGAAGATGATAATGGAGAAAATAGC
TTAAAGAAAATCTTAAAACTCAGCTATGTTTATCTACCATCACCGTATCTAAAAAAATGT
TTTGCTTACTTTGCAATGTTTCCAAAAGATTTCTTGTTTGAAAAGGACCAACTTATCCAA
CTCTGGATGGCAGAAGGGTTTCTCCATCCATATCAAGAGATCACCGTGATGGAAGACGTT
GGGCACAAGTTTTTCCAAATCTTGTTGCGTAATTCCTTGCTGCAAGAGCTAGATGAGCAC
AACAATATAACATACTGTAAGATGCACGATCTTGTGCATGATTTGGCTGGAGATATCTTA
AAATCTAAACTATTTGATCCGAAGGGCAATGATGGAGAAAAACTTTCTCAAGTTCGATAC
TTTGGATGGGTCTCACCAAGTGATCAAATGGATATGATAAATGAGCCAGGACGTTTGTGC
ACATTGTTCTGGAAAAGCAATATATCTGATGATATGTTATTGAGCTTTCAGTTCTTGAGA
GTCTTAAATTTGTCCCAATCAGGCATCATGGAGTTGTCAGCCAAAATCAGCAAGCTAATA
TACTTGAGATATCTTGATCTCTCCAACACTAAGATCAGAGCCTTGCCCAACTCCATTTGC
AAGCTCTACAATTTGCAAACACTTAGAGTCAAAAACATTTTTTCATTCTGGAAGCTTCCA
GAAGAAATGGCAAATATGATAAGTTTGAGACACATAGATTGCAACTGGCATGACCTATTA
GGTATTCACATGCCACTTAATATGGGGCAATTGACTAGTCTTCAGACGCTACCGTTTTTC
AATGTAGGTTTAAAGAAGGGTTGTCGAATAGAAGAATTAGGTCGTTTGAAAAACCTTAGA
GGTGAATTGACAATCAGATGTCTCCAATTAGTCAAAAATAAAGAAGAGGCTCGAACAACA
TATTTACAGGAGAAACCAAATATCTACAGGCTGGCATATTTATGGTCCCTTAATGAATCA
GAAGGCTGTGAGATCAATCATGAGCATGTGTTGGATGGTCTTCAACCACATTCTAACTTG
AAAACCTTAGAAGTGGTGAACTATTTCGGGACTATATTTCCTTCATGGTTCACTGAAGGA
GAATTGATACCAAATTTGGTCAAGTTGATATTAAGTGGTTGCGAAAGGTGTAAAGAAATT
CCATCTCTTGGTCAACTGAAGTTCCTTCGGCATCTTGAGCTGATAGGATTCCTTGAATTG
AAATGCATCGGACCTACATTTTATGGTGTTGAGATCAATGATAATGGATCAAGCAGCAAT
AATGGCAATATCCATGTGTTCCCGTCATTGAAAGAACTAGTATTAGAGAATATGCGTAGC
CTTATTGAGTGGAAGGGAGATGAAGTTGGAGTAAGAATGTTTCCTAGGCTTGAGAAGTTG
ACGATTACAGGCTGTCCATTGTTAAAAAGTACTCCAACTCAATTTGAAATCCTGCGTGAA
TTAAAAATCAAAAGAGTTGACAGTGAATTGCCATTGTTGAACTTGTGCAGCAACTTAACA
TCTCTTGTGGATCTTTTTGTTGATCACGTGAAAGAGCTCACTTGTATACCCGATGAGATG
CTACGCAACAACATTTCTCTTCAACTCCTATCAGTCTCAAAATGTGGAGAGTTTCGTGAA
TTGCCACAAAGCTTGTACAATCTTAAGAACTTGCAAATATCCGACTGCCCCAATTTAACT
TCTGTTCCTGTTCCCAGTGGAGAGAATTATTTCAGTTCTCTAGAGGTTTTGTGTGTCTAC
CGTTGTGAGAACTTGGTTTCCTTGCCTTTACATGTGGGGGAAATGCCTTCACTTTCCTAT
TTGGATATATCAGAATGTCCCAAATTGATTAGTTTACCCTCAGGGGGCCTTCACCATCTC
ACTGGGTTAACGAATCTGGGAATCGGTCCTTTCTCAGAGATGGTGGATTTTGAGGCATTC
CAATTGATTTTTAATGGCATTCAGCAGCTGTTGTCCCTTCGTACATTGAACTTGTGGGGA
CACTTGCACTGGGATTCTCTGCCCTATCAGCTTATGCAACTCTCTTCCTTAGCAGACATC
CGTATATATGATTTCGGAATCGAGGCTCTTCCTCATAGATTTGGCAACCTTACTTCTCTT
GAATCATTGGGACTTACGAGGTGCAAACGGCTACGACATGTGGACTTCTCAGATGCCATG
CCCAAATTACGGTATCTGTCCATGAATGATTGTCCATTGTTAGAAGCTCTGTCGGATGGG
CTTGGCAACCTTGCTTCTTTGGAACATGTAACTTTGCAGAACTGCGAAAAACTAGAGCGT
CTGCCATCCAGAGATTCCATGCGACGCCTCACCAATTTAAGGTACCTCGACATTTATGGC
TGCCCACGGTTAGAAGAAAGTTGCACCAATAGGAGTGGCCGAAACTCCCAGTGGTCCAAC
ATTTCCCATATTCCACAAATTGAACTAGGCAGTCAGATAATTCAGGATAGACGTTACTAG