Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049974
CDS Infomation

pacid=37479258 polypeptide=PGSC0003DMP400033737 locus=PGSC0003DMG402019416 ID=PGSC0003DMT400049974.v4.03 annot-version=v4.03
Sequence

ATGAAAAGTCCAAATACCCAATTTTCCGGTGGTGGCCGGAGATCTAGTTCCGGCGCTGTA
TCTATGTCTTCCAGCTCCGTGGGTTCCCGTACATCTGATCGTCTTCCTCATTCACCTAGT
TCATCCAACTACTCCTCAACTACTACTGCAATTTCTCAAAAGTCAAATTCCGGCAGGAAT
CCGGTCATATTCGCCGTCAAATCCATTGCAGAAGCTTTTGCATCCTGTTTCACTCCGCCG
GAGCCTAAATCTTCGAGTACTAATTTTGGTGATTCCGATTCATTTAAAGCTCCTTCAGTT
GCATCTGATGGCGGAAGGAAGAAGAGACACAGTAGCAGTAGCAGTAGAGGTCGAAGCATC
TATGGTAGTGAAAATAATTCAATTCATACAAAAGAGGCAGGGAGTATTAAATTCAACATG
GAAGATATTTATAAGGCCACAAAGAACTTCTCCCCAAGCCTTAAAATTGGTCAAGGAGGT
TTCGGGATAGTTTACAAGGGTTGCCTACCGGATGGAACAGTTGTTGCAATCAAACGCGCC
AAAAATAATATACATGATAAACACTCGGGAGCTGAATTTCGAAGTGAGGTTCGAACTTTA
GAAAAAATAGAACATCTAAATTTAGTGAAGTTTTATGGGTTCTTGGAGCATGGAGAAGAA
AAGATTTTGGTTGTTGAGTATGTCCCTAATGGAACTCTTAGGGAACACTTGGATAGTGTC
AGTGGAAATGTTCTTGATTTCGCGTCAAGACTAGACATCGGAATAGATGTAGGACATGCA
ATTACATATTTGCATATGTATACAGATCACCCTATTATCCATCGAGACATCAAGTCTTCC
AATATTCTCCTCACTGAAAACCTTCGAGCTAAGGTGGCCGATTTTGGTTTTGCTAGGCTA
GCAGCTGACACTGAGTCAGGAGCCACACATGTTTCTACCCAAGTTAAAGGGACAGCAGGA
TACTTAGACCCAGAATACCTGAGTACCTATCAACTTACTGAGAAGAGTGATGTCTATTCA
TTTGGTGTTTTACTTGTGGAACTTGTTACTGGAAGGCGCCCAATCGAGTCAAAAAAAGAA
ATCAAAGAGCGCATTACCGCAAGATGGGCAATGAAGAAGTTCACCAGTGGAGATGCAATC
TTAACTTTGGATCCAAGGCTAGAAAGATCTGCTGCAAATAGTTTGGCCATGGAAAAAATT
TATGAACTAGCTTTGCAATGTTTGGCTCCTCATCGACAGAACCGGCCTACCATGAGAAAG
TGTGCCGAGATTCTATGGAGCATCCGCAAGAATTACAGAGAACTAGCAGGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400033737
PEP Infomation

pacid=37479258 transcript=PGSC0003DMT400049974 locus=PGSC0003DMG402019416 ID=PGSC0003DMT400049974.v4.03 annot-version=v4.03
Sequence

MKSPNTQFSGGGRRSSSGAVSMSSSSVGSRTSDRLPHSPSSSNYSSTTTAISQKSNSGRN
PVIFAVKSIAEAFASCFTPPEPKSSSTNFGDSDSFKAPSVASDGGRKKRHSSSSSRGRSI
YGSENNSIHTKEAGSIKFNMEDIYKATKNFSPSLKIGQGGFGIVYKGCLPDGTVVAIKRA
KNNIHDKHSGAEFRSEVRTLEKIEHLNLVKFYGFLEHGEEKILVVEYVPNGTLREHLDSV
SGNVLDFASRLDIGIDVGHAITYLHMYTDHPIIHRDIKSSNILLTENLRAKVADFGFARL
AADTESGATHVSTQVKGTAGYLDPEYLSTYQLTEKSDVYSFGVLLVELVTGRRPIESKKE
IKERITARWAMKKFTSGDAILTLDPRLERSAANSLAMEKIYELALQCLAPHRQNRPTMRK
CAEILWSIRKNYRELAG*

Transcript Sequence

Transcript ID

PGSC0003DMT400049974
Transcript Infomation

pacid=37479258 locus=PGSC0003DMG402019416 ID=PGSC0003DMT400049974.v4.03 annot-version=v4.03
Sequence

ATGAAAAGTCCAAATACCCAATTTTCCGGTGGTGGCCGGAGATCTAGTTCCGGCGCTGTA
TCTATGTCTTCCAGCTCCGTGGGTTCCCGTACATCTGATCGTCTTCCTCATTCACCTAGT
TCATCCAACTACTCCTCAACTACTACTGCAATTTCTCAAAAGTCAAATTCCGGCAGGAAT
CCGGTCATATTCGCCGTCAAATCCATTGCAGAAGCTTTTGCATCCTGTTTCACTCCGCCG
GAGCCTAAATCTTCGAGTACTAATTTTGGTGATTCCGATTCATTTAAAGCTCCTTCAGTT
GCATCTGATGGCGGAAGGAAGAAGAGACACAGTAGCAGTAGCAGTAGAGGTCGAAGCATC
TATGGTAGTGAAAATAATTCAATTCATACAAAAGAGGCAGGGAGTATTAAATTCAACATG
GAAGATATTTATAAGGCCACAAAGAACTTCTCCCCAAGCCTTAAAATTGGTCAAGGAGGT
TTCGGGATAGTTTACAAGGGTTGCCTACCGGATGGAACAGTTGTTGCAATCAAACGCGCC
AAAAATAATATACATGATAAACACTCGGGAGCTGAATTTCGAAGTGAGGTTCGAACTTTA
GAAAAAATAGAACATCTAAATTTAGTGAAGTTTTATGGGTTCTTGGAGCATGGAGAAGAA
AAGATTTTGGTTGTTGAGTATGTCCCTAATGGAACTCTTAGGGAACACTTGGATAGTGTC
AGTGGAAATGTTCTTGATTTCGCGTCAAGACTAGACATCGGAATAGATGTAGGACATGCA
ATTACATATTTGCATATGTATACAGATCACCCTATTATCCATCGAGACATCAAGTCTTCC
AATATTCTCCTCACTGAAAACCTTCGAGCTAAGGTGGCCGATTTTGGTTTTGCTAGGCTA
GCAGCTGACACTGAGTCAGGAGCCACACATGTTTCTACCCAAGTTAAAGGGACAGCAGGA
TACTTAGACCCAGAATACCTGAGTACCTATCAACTTACTGAGAAGAGTGATGTCTATTCA
TTTGGTGTTTTACTTGTGGAACTTGTTACTGGAAGGCGCCCAATCGAGTCAAAAAAAGAA
ATCAAAGAGCGCATTACCGCAAGATGGGCAATGAAGAAGTTCACCAGTGGAGATGCAATC
TTAACTTTGGATCCAAGGCTAGAAAGATCTGCTGCAAATAGTTTGGCCATGGAAAAAATT
TATGAACTAGCTTTGCAATGTTTGGCTCCTCATCGACAGAACCGGCCTACCATGAGAAAG
TGTGCCGAGATTCTATGGAGCATCCGCAAGAATTACAGAGAACTAGCAGGCTGA