Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049926
CDS Infomation

pacid=37477171 polypeptide=PGSC0003DMP400033707 locus=PGSC0003DMG400019403 ID=PGSC0003DMT400049926.v4.03 annot-version=v4.03
Sequence

ATGAAGTATCAGAATTTGGACCTATTCGACCCGAGAACGGCGGTCATGGACCCGGAATAC
TCCCCTACCCATACCGGGGAACCCGATTTCGCCTTCGCCTTCGACGACGTCAACTTCTCT
GATCGTATTCTACGGATCGAGATCCTTGGAGACTCAATCGCCGGTGGTTCTAATTCCAGC
GGCGGCTGCAGTAGCTTAGCCGATTGGGCTCGTAATCGCAAGCGCCGACGTGAGGATTTC
AGGAAGGAAAACGACATGTACCACTCGTTTGCAGCTTTGGATATCACAGCATGCCCTGAA
GATCAGGTAATTTGCTGTAATCAAATTGATAGTGAAGATGCTGATAACGAAAATCAAGAT
GAAGCAGTTGTTGCAATGATTGAAGAGCCAAACTCAGGAGATGAAGGTGCTAATAGTGAT
GATTCAACTTGGAATTGTGATTCTCCAAGGGTTATGAGAGTTAAAACACTAAACATTAGC
TCCCCCATTTTAGCAGCAAAGAGTCCATTCTTCTACAAGCTCTTCTCAAATGGGATGAGA
GAGTCTGAGCAAAGACAAGTAACTCTACGGATCAATGCTTCAGAGGAAGCTGCATTGATG
GAGCTCCTGAAATTTATGTATAGAAATATGTTAACTACAAATACAGCGCCTGGATTGCTG
GACGTGCTCATGGCTGCTGACAAGTTTGAGGTTGCATCTTGCATGAAGTATTGCAGCAGG
CTACTGTGTAATTTGCCTATGACTCCGGAGTCAGCTTTGCTGTATCTGGAGCTTCCTTCT
AGTGTCCTGATGGCTGATGCAGTTCGGCCATTGACTGATGCAGCAAAACAATTCCTAGCT
GCAAGATACAAAGATATAACCAAGTTCCAAGAAGAGGTCATGAAGTTGCCTCTTGCTGGT
ATTGAGGCAATTTTGTCCAGTGATGACCTTCAGGTAGCATCAGAAGATGCAGTATATGAC
TTTGTCTTGAAGTGGACAAGGGCTCATTATCCTTTGATAGAGGAACGCCGAGAAATTCTT
AGTTCAAGACTTGGTCGTTGCATCCGCTTTCCTTTCATGAGCTGCCGAAAGCTTCGGAAG
GTTCTTGCATGTAATGACTTTGAACATGAGTTTGCATCCAAACTAGTGCTTGAGGCCCTC
TTTTTTAAAGCTGAGGCCCCACACCGCCAACGAACTCAAGCTGCAGAAGAATCAGCTTCG
ACCAGTCGTCGTTTTGTAGAGCGTGCATACAAGTATCGACCTGTTAAGGTTGTTGAGTTT
GAACTTCCACGCCAACAATGTATAGTCTACTTAGATCTTAAGCGGGACGAATGTGCTAAT
CTTTTTCCATCTGGGAGAGTATATTCTCAAGCTTTTCATTTGGGTGGACAAGGGTTTTTC
CTGTCCGCACATTGCAACATGGATCAGCAAAGCTCTTTCCATTGTTTTGGTCTCTTTTTG
GGAATGCAGGAAAAGGGTTCAGTTTCATTTACAGTCGACTATGAATTTGCTGCGAGGACA
ACACTAGCAGAGGAGTATGTGAGCAAATACAAGGGAAACTATACATTTACTGGGGGTAAG
GCAGTTGGCTATCGCAATTTATTCGCCATACCCTGGACTTCTTTCATGGCTGAGGACAGT
CTCTATTTTATTAAAGGCGTACTCCATCTCAGGGCTGAACTTACTATCAGGCACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400033707
PEP Infomation

pacid=37477171 transcript=PGSC0003DMT400049926 locus=PGSC0003DMG400019403 ID=PGSC0003DMT400049926.v4.03 annot-version=v4.03
Sequence

MKYQNLDLFDPRTAVMDPEYSPTHTGEPDFAFAFDDVNFSDRILRIEILGDSIAGGSNSS
GGCSSLADWARNRKRRREDFRKENDMYHSFAALDITACPEDQVICCNQIDSEDADNENQD
EAVVAMIEEPNSGDEGANSDDSTWNCDSPRVMRVKTLNISSPILAAKSPFFYKLFSNGMR
ESEQRQVTLRINASEEAALMELLKFMYRNMLTTNTAPGLLDVLMAADKFEVASCMKYCSR
LLCNLPMTPESALLYLELPSSVLMADAVRPLTDAAKQFLAARYKDITKFQEEVMKLPLAG
IEAILSSDDLQVASEDAVYDFVLKWTRAHYPLIEERREILSSRLGRCIRFPFMSCRKLRK
VLACNDFEHEFASKLVLEALFFKAEAPHRQRTQAAEESASTSRRFVERAYKYRPVKVVEF
ELPRQQCIVYLDLKRDECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFL
GMQEKGSVSFTVDYEFAARTTLAEEYVSKYKGNYTFTGGKAVGYRNLFAIPWTSFMAEDS
LYFIKGVLHLRAELTIRH*

Transcript Sequence

Transcript ID

PGSC0003DMT400049926
Transcript Infomation

pacid=37477171 locus=PGSC0003DMG400019403 ID=PGSC0003DMT400049926.v4.03 annot-version=v4.03
Sequence

ATGAAGTATCAGAATTTGGACCTATTCGACCCGAGAACGGCGGTCATGGACCCGGAATAC
TCCCCTACCCATACCGGGGAACCCGATTTCGCCTTCGCCTTCGACGACGTCAACTTCTCT
GATCGTATTCTACGGATCGAGATCCTTGGAGACTCAATCGCCGGTGGTTCTAATTCCAGC
GGCGGCTGCAGTAGCTTAGCCGATTGGGCTCGTAATCGCAAGCGCCGACGTGAGGATTTC
AGGAAGGAAAACGACATGTACCACTCGTTTGCAGCTTTGGATATCACAGCATGCCCTGAA
GATCAGGTAATTTGCTGTAATCAAATTGATAGTGAAGATGCTGATAACGAAAATCAAGAT
GAAGCAGTTGTTGCAATGATTGAAGAGCCAAACTCAGGAGATGAAGGTGCTAATAGTGAT
GATTCAACTTGGAATTGTGATTCTCCAAGGGTTATGAGAGTTAAAACACTAAACATTAGC
TCCCCCATTTTAGCAGCAAAGAGTCCATTCTTCTACAAGCTCTTCTCAAATGGGATGAGA
GAGTCTGAGCAAAGACAAGTAACTCTACGGATCAATGCTTCAGAGGAAGCTGCATTGATG
GAGCTCCTGAAATTTATGTATAGAAATATGTTAACTACAAATACAGCGCCTGGATTGCTG
GACGTGCTCATGGCTGCTGACAAGTTTGAGGTTGCATCTTGCATGAAGTATTGCAGCAGG
CTACTGTGTAATTTGCCTATGACTCCGGAGTCAGCTTTGCTGTATCTGGAGCTTCCTTCT
AGTGTCCTGATGGCTGATGCAGTTCGGCCATTGACTGATGCAGCAAAACAATTCCTAGCT
GCAAGATACAAAGATATAACCAAGTTCCAAGAAGAGGTCATGAAGTTGCCTCTTGCTGGT
ATTGAGGCAATTTTGTCCAGTGATGACCTTCAGGTAGCATCAGAAGATGCAGTATATGAC
TTTGTCTTGAAGTGGACAAGGGCTCATTATCCTTTGATAGAGGAACGCCGAGAAATTCTT
AGTTCAAGACTTGGTCGTTGCATCCGCTTTCCTTTCATGAGCTGCCGAAAGCTTCGGAAG
GTTCTTGCATGTAATGACTTTGAACATGAGTTTGCATCCAAACTAGTGCTTGAGGCCCTC
TTTTTTAAAGCTGAGGCCCCACACCGCCAACGAACTCAAGCTGCAGAAGAATCAGCTTCG
ACCAGTCGTCGTTTTGTAGAGCGTGCATACAAGTATCGACCTGTTAAGGTTGTTGAGTTT
GAACTTCCACGCCAACAATGTATAGTCTACTTAGATCTTAAGCGGGACGAATGTGCTAAT
CTTTTTCCATCTGGGAGAGTATATTCTCAAGCTTTTCATTTGGGTGGACAAGGGTTTTTC
CTGTCCGCACATTGCAACATGGATCAGCAAAGCTCTTTCCATTGTTTTGGTCTCTTTTTG
GGAATGCAGGAAAAGGGTTCAGTTTCATTTACAGTCGACTATGAATTTGCTGCGAGGACA
ACACTAGCAGAGGAGTATGTGAGCAAATACAAGGGAAACTATACATTTACTGGGGGTAAG
GCAGTTGGCTATCGCAATTTATTCGCCATACCCTGGACTTCTTTCATGGCTGAGGACAGT
CTCTATTTTATTAAAGGCGTACTCCATCTCAGGGCTGAACTTACTATCAGGCACTGA