Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049814
CDS Infomation

pacid=37454755 polypeptide=PGSC0003DMP400033626 locus=PGSC0003DMG400019350 ID=PGSC0003DMT400049814.v4.03 annot-version=v4.03
Sequence

ATGGAAAATTATGAGATTTTGGAGCAGATTGGGAAAGGTTCCTTTGGCTCTGCACTACTT
GTAAGGCATAAACAAGAAAAGAAGAAATATGTTATGAAAAAAATTCGCTTGGCTCGCCAG
ACAGAGAGAACACGCAGATCTGCCCATCAGGAGATGGAACTGATCGCAAGAGTACGAAGT
CCATTTGTGGTGGAATACAAAGATTCCTGGGTGGAGAAGGGATGCTATGTGTGCATTATT
ATTGGGTATTGTGAAGCTGGTGATATGGCAGATGCTATTAAGAGAACGAATGGTGTTCTT
TTCCCCGAGGAGAAGCTTTGTAAGTGGCTAGTTCAACTGTTGATGGCACTTGATCACTTG
CATTCGAACCATATAATTCACCGTGATGTCAAGTGTTCAAATATTTTTCTGACTAAAGAG
CACGATATACGTCTAGGTGATTTTGGTCTTGCTAAAATACTGTCTTCCAATGATCTTGCT
TCCTCTGTGGTGGGCACTCCAACTTATATGTGTCCTGAGCTTCTCGCTGATATACCCTAT
GGTTGCAAATCAGATATATGGTCTTTGGGTTGCTGCTTATACGAAATGACTTCTCACAAG
CCGGCATTCAAAGCATTTGATATGCAAGGTCTCATTAATAAAATTAACAAATGTATAGTT
GCTCCACTTCCCACCGTGTATTCTGGTGCACTCCGTGGCCTTATTAAGAGTATGCTAAGG
AAAAATCCAGAACTCAGGCCAAGTGCTGCAGACCTACTCCAACATCCCCATCTTCAGCCC
TATGTTTTAAAAATCCTTCTGAATTCTGACAGCCCGAGGCAGCACAAGTTCCCAGTCCAA
TCTTCTAATTCAACATATGCAAAGAAAAAAAGATTGTCTGAGCCCAGAAATGCTCCTGTC
TTTAATGAAAGAGAGCTGAGGCGATTGTCCAGTGATAGAGCTTTGAATCCTAGTATTTCT
GGAATGGACTCTCCATGTTTATCCCGGAGAACAAAAGATCTAATGAGTTCTGTGAAGAAA
AATTATTCAGAACCATCTGTTGAAAGTGCTCCTTATGACCTTGGTGTAAAAAGTTCTGCT
ATCTCAAAGTTGTCGGCTGCTGTCAAAACTGTGCGATTCAATTCAAATAGAAATTCCACA
CCTCAGAGGAGACAGAGCACACCATTAAAGATGTCCAATGCTGGCTCTACCCGTGAACTG
CTTCCAGTGACAAATACACTAGTTAGCCAACCTTCCAAGTCAACACGTAGAGCATCTCTT
CCTTTATCAAGAGGAGCTGCGAAGTTGGAATCACCTTACAAACACAATGTTGGTCTTATT
CACCATGTGGTGTCTCCGGATGTTTCCATGAATGCTCCAAGAATTGACAAGATGGTTGAT
CCCTTGGCTTCTTCAGAAGACCCCTTTTTACCCATCCAGAGAGCTTCACCAAAATCGACA
CAGTTGTCTTCCCCATCACCACGCTATAGTGACTGGTCATTCACAAAAGACAAGTGTACA
GTACAGGTTGTTGACAGAACCTTTCCCAAGCCACCTTTAATTGACCCTGTTCATGGAGTT
GCACATATTGGAAGTGAATGTTCAGAACATTATCCAACTGGTGCCTCAAGCCGGTCATCA
TCAGAATCTCGTTCACGGAAGTTTGACACATCTTCTTACCAGCAACGTGCGGAAGCCTTA
GAAGGATTACTTGAGTTCAGTGCGCAACTATTGCAGCAAGAGCGTCTAGACGAGCTTATG
GTGTTATTGAAACCATTTGGTCCAGAAAAGGTTTCTCCAAGGGAAACTGCTATATGGCTG
ACAAAGAGTTTCAAGGAGAATGGAGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400033626
PEP Infomation

pacid=37454755 transcript=PGSC0003DMT400049814 locus=PGSC0003DMG400019350 ID=PGSC0003DMT400049814.v4.03 annot-version=v4.03
Sequence

MENYEILEQIGKGSFGSALLVRHKQEKKKYVMKKIRLARQTERTRRSAHQEMELIARVRS
PFVVEYKDSWVEKGCYVCIIIGYCEAGDMADAIKRTNGVLFPEEKLCKWLVQLLMALDHL
HSNHIIHRDVKCSNIFLTKEHDIRLGDFGLAKILSSNDLASSVVGTPTYMCPELLADIPY
GCKSDIWSLGCCLYEMTSHKPAFKAFDMQGLINKINKCIVAPLPTVYSGALRGLIKSMLR
KNPELRPSAADLLQHPHLQPYVLKILLNSDSPRQHKFPVQSSNSTYAKKKRLSEPRNAPV
FNERELRRLSSDRALNPSISGMDSPCLSRRTKDLMSSVKKNYSEPSVESAPYDLGVKSSA
ISKLSAAVKTVRFNSNRNSTPQRRQSTPLKMSNAGSTRELLPVTNTLVSQPSKSTRRASL
PLSRGAAKLESPYKHNVGLIHHVVSPDVSMNAPRIDKMVDPLASSEDPFLPIQRASPKST
QLSSPSPRYSDWSFTKDKCTVQVVDRTFPKPPLIDPVHGVAHIGSECSEHYPTGASSRSS
SESRSRKFDTSSYQQRAEALEGLLEFSAQLLQQERLDELMVLLKPFGPEKVSPRETAIWL
TKSFKENGV*

Transcript Sequence

Transcript ID

PGSC0003DMT400049814
Transcript Infomation

pacid=37454755 locus=PGSC0003DMG400019350 ID=PGSC0003DMT400049814.v4.03 annot-version=v4.03
Sequence

ATGGAAAATTATGAGATTTTGGAGCAGATTGGGAAAGGTTCCTTTGGCTCTGCACTACTT
GTAAGGCATAAACAAGAAAAGAAGAAATATGTTATGAAAAAAATTCGCTTGGCTCGCCAG
ACAGAGAGAACACGCAGATCTGCCCATCAGGAGATGGAACTGATCGCAAGAGTACGAAGT
CCATTTGTGGTGGAATACAAAGATTCCTGGGTGGAGAAGGGATGCTATGTGTGCATTATT
ATTGGGTATTGTGAAGCTGGTGATATGGCAGATGCTATTAAGAGAACGAATGGTGTTCTT
TTCCCCGAGGAGAAGCTTTGTAAGTGGCTAGTTCAACTGTTGATGGCACTTGATCACTTG
CATTCGAACCATATAATTCACCGTGATGTCAAGTGTTCAAATATTTTTCTGACTAAAGAG
CACGATATACGTCTAGGTGATTTTGGTCTTGCTAAAATACTGTCTTCCAATGATCTTGCT
TCCTCTGTGGTGGGCACTCCAACTTATATGTGTCCTGAGCTTCTCGCTGATATACCCTAT
GGTTGCAAATCAGATATATGGTCTTTGGGTTGCTGCTTATACGAAATGACTTCTCACAAG
CCGGCATTCAAAGCATTTGATATGCAAGGTCTCATTAATAAAATTAACAAATGTATAGTT
GCTCCACTTCCCACCGTGTATTCTGGTGCACTCCGTGGCCTTATTAAGAGTATGCTAAGG
AAAAATCCAGAACTCAGGCCAAGTGCTGCAGACCTACTCCAACATCCCCATCTTCAGCCC
TATGTTTTAAAAATCCTTCTGAATTCTGACAGCCCGAGGCAGCACAAGTTCCCAGTCCAA
TCTTCTAATTCAACATATGCAAAGAAAAAAAGATTGTCTGAGCCCAGAAATGCTCCTGTC
TTTAATGAAAGAGAGCTGAGGCGATTGTCCAGTGATAGAGCTTTGAATCCTAGTATTTCT
GGAATGGACTCTCCATGTTTATCCCGGAGAACAAAAGATCTAATGAGTTCTGTGAAGAAA
AATTATTCAGAACCATCTGTTGAAAGTGCTCCTTATGACCTTGGTGTAAAAAGTTCTGCT
ATCTCAAAGTTGTCGGCTGCTGTCAAAACTGTGCGATTCAATTCAAATAGAAATTCCACA
CCTCAGAGGAGACAGAGCACACCATTAAAGATGTCCAATGCTGGCTCTACCCGTGAACTG
CTTCCAGTGACAAATACACTAGTTAGCCAACCTTCCAAGTCAACACGTAGAGCATCTCTT
CCTTTATCAAGAGGAGCTGCGAAGTTGGAATCACCTTACAAACACAATGTTGGTCTTATT
CACCATGTGGTGTCTCCGGATGTTTCCATGAATGCTCCAAGAATTGACAAGATGGTTGAT
CCCTTGGCTTCTTCAGAAGACCCCTTTTTACCCATCCAGAGAGCTTCACCAAAATCGACA
CAGTTGTCTTCCCCATCACCACGCTATAGTGACTGGTCATTCACAAAAGACAAGTGTACA
GTACAGGTTGTTGACAGAACCTTTCCCAAGCCACCTTTAATTGACCCTGTTCATGGAGTT
GCACATATTGGAAGTGAATGTTCAGAACATTATCCAACTGGTGCCTCAAGCCGGTCATCA
TCAGAATCTCGTTCACGGAAGTTTGACACATCTTCTTACCAGCAACGTGCGGAAGCCTTA
GAAGGATTACTTGAGTTCAGTGCGCAACTATTGCAGCAAGAGCGTCTAGACGAGCTTATG
GTGTTATTGAAACCATTTGGTCCAGAAAAGGTTTCTCCAAGGGAAACTGCTATATGGCTG
ACAAAGAGTTTCAAGGAGAATGGAGTGTAA