Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049805
CDS Infomation

pacid=37457956 polypeptide=PGSC0003DMP400033618 locus=PGSC0003DMG400019346 ID=PGSC0003DMT400049805.v4.03 annot-version=v4.03
Sequence

ATGTCGCTGGAAGAAACTGTTTACAAGTCTCCTCTGGATAAACCGCTCTACCTACTTACC
GATGACGACATTTCTCAGCTCACTCGCGAAGATTGCCGACGTTATCTTAAAGCTAAAGGA
ATGAGAAAACCGTCATGGAATAAATCACAGGCGATTCAGCAGGTGATATCACTGAAGGCG
TTGTTAGAGACGACGCCGGACTCCGACACCGGTCAGCGGAAAAGGCGTCACATTCCTCGC
CCAGACACCAGTTTACAGCGAGTCCAGAAAGAAACGGGCATCGATGCAGAATTTGCTGAA
TCGGCTGAAGAAATGGTGCCGTACGGTAGAAAACTTCCCAATAAACCTGATCTTTCCGGC
AATAAGGCTGCAGGTTCTGTTGCCGTTGTCAATAACTTAACTCCTTCTAGAACCACAGAT
TCGGGAAATGCATCAGCAGGTCAATTGATAATCTTCTATTGTGGCAAGGTGAATGTGTAT
GATGATGTACCTGCTGAAAAGGCACAAGCAATCATTCATCTTGCTGCAAGCCCACTCTTT
GTGCCTTCAGAAACTCCATTGGATGCTACCAGAGCAGCTCAACATTCCGAATGCCATTTG
CAATCTGCAAATGTTAAAATGGGTCCAGATTCTCCTATGGTGCTCATGCCAACCATGCAA
ACAGGGAGAATAACTGAAGTGACTCGCCTGCATTTGGAGGGAAGCAACACTTTCTATGAG
GACAATTCTGAATCAGTGAACCACGTAAGCAGAAAAGCATTACTGGAAAGATATCGTGAG
AAGCGGAAAGACAGGTTCAAGAGAAAGATGGGAATGCCTTCATCTGCTAGCTTGGACATC
TATTTGAACCATCGAACCGGAAATCATACCCCAAGTGAGCTCTCAAGTAGGAGCAACACT
TGTTCCCCGCCTGCTATTAGATTATCTGTTGCACCTGCTCCAAGTGGTTCAATGGATAAC
ATTCTCCAAATGGATGCCAATGCTTCTGGTTTTCTCGACGACAAAGATGGTAAAGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400033618
PEP Infomation

pacid=37457956 transcript=PGSC0003DMT400049805 locus=PGSC0003DMG400019346 ID=PGSC0003DMT400049805.v4.03 annot-version=v4.03
Sequence

MSLEETVYKSPLDKPLYLLTDDDISQLTREDCRRYLKAKGMRKPSWNKSQAIQQVISLKA
LLETTPDSDTGQRKRRHIPRPDTSLQRVQKETGIDAEFAESAEEMVPYGRKLPNKPDLSG
NKAAGSVAVVNNLTPSRTTDSGNASAGQLIIFYCGKVNVYDDVPAEKAQAIIHLAASPLF
VPSETPLDATRAAQHSECHLQSANVKMGPDSPMVLMPTMQTGRITEVTRLHLEGSNTFYE
DNSESVNHVSRKALLERYREKRKDRFKRKMGMPSSASLDIYLNHRTGNHTPSELSSRSNT
CSPPAIRLSVAPAPSGSMDNILQMDANASGFLDDKDGKE*

Transcript Sequence

Transcript ID

PGSC0003DMT400049805
Transcript Infomation

pacid=37457956 locus=PGSC0003DMG400019346 ID=PGSC0003DMT400049805.v4.03 annot-version=v4.03
Sequence

ATGTCGCTGGAAGAAACTGTTTACAAGTCTCCTCTGGATAAACCGCTCTACCTACTTACC
GATGACGACATTTCTCAGCTCACTCGCGAAGATTGCCGACGTTATCTTAAAGCTAAAGGA
ATGAGAAAACCGTCATGGAATAAATCACAGGCGATTCAGCAGGTGATATCACTGAAGGCG
TTGTTAGAGACGACGCCGGACTCCGACACCGGTCAGCGGAAAAGGCGTCACATTCCTCGC
CCAGACACCAGTTTACAGCGAGTCCAGAAAGAAACGGGCATCGATGCAGAATTTGCTGAA
TCGGCTGAAGAAATGGTGCCGTACGGTAGAAAACTTCCCAATAAACCTGATCTTTCCGGC
AATAAGGCTGCAGGTTCTGTTGCCGTTGTCAATAACTTAACTCCTTCTAGAACCACAGAT
TCGGGAAATGCATCAGCAGGTCAATTGATAATCTTCTATTGTGGCAAGGTGAATGTGTAT
GATGATGTACCTGCTGAAAAGGCACAAGCAATCATTCATCTTGCTGCAAGCCCACTCTTT
GTGCCTTCAGAAACTCCATTGGATGCTACCAGAGCAGCTCAACATTCCGAATGCCATTTG
CAATCTGCAAATGTTAAAATGGGTCCAGATTCTCCTATGGTGCTCATGCCAACCATGCAA
ACAGGGAGAATAACTGAAGTGACTCGCCTGCATTTGGAGGGAAGCAACACTTTCTATGAG
GACAATTCTGAATCAGTGAACCACGTAAGCAGAAAAGCATTACTGGAAAGATATCGTGAG
AAGCGGAAAGACAGGTTCAAGAGAAAGATGGGAATGCCTTCATCTGCTAGCTTGGACATC
TATTTGAACCATCGAACCGGAAATCATACCCCAAGTGAGCTCTCAAGTAGGAGCAACACT
TGTTCCCCGCCTGCTATTAGATTATCTGTTGCACCTGCTCCAAGTGGTTCAATGGATAAC
ATTCTCCAAATGGATGCCAATGCTTCTGGTTTTCTCGACGACAAAGATGGTAAAGAGTGA