Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049782
CDS Infomation

pacid=37458186 polypeptide=PGSC0003DMP400033598 locus=PGSC0003DMG400019339 ID=PGSC0003DMT400049782.v4.03 annot-version=v4.03
Sequence

ATGAGTAAGAAGAAAAACCCTCTTGTATTCTTAGATGTATCAATTGATGGAGATACTGCA
GAAAAAATTGTTATTGAGCTCTTTGCAGATACTGTCCCAAGGACTGCAGAAAATTTCCGG
TCGCTCTGCACAGGTGAGAAGGGAGTTGGAGTATCTACTGGAAAACCTCTGCACTACAAA
GGATGCTTATTTCACCGTGTAATAAAAGGGTTTATGGCACAAGGTGGTGATTTCTCCAAA
GGGAATGGCACTGGTGGAGAGAGTATATATGGAGGGAAATTTCCAGATGAAAACTTCAAA
GTTGCCCACACTGAAGCTGGTCTTCTCTCGATGGCAAATAGTGGTCCTAATACAAATGGA
TCCCAGTTCTTCATTATATTTAAGAGAACTCCCCATCTCGACGGGAAGCATGTTGTTTTT
GGGAAAGTTGTAAAGGGAATGGATTTAGTGAAGAAAATTGAACAGCTGGGAACAGACAGT
GGGAAGCCATCTGGGCTTGTGAAAATTGTGGATTGTGGCGAAATGTCTGAGAAGAAAAGT
AATGATACATCCAAAGCAGAGAAAGGGAAAAATAAGAAGTCCGCGAGAGCTCTTTCCTCT
GATGATGATTCAGACAGTCAAGAAAAGGGGAAACGCAAATCATCCACCAATAGAAAGAAA
AAGAAAAAGAGGAGATACTCTTCATCTGATTCTTACAGTTCTGAGACAGATACTGATTCC
TCTTCAGACTCTGACTCAGATTCTAAGCTGGACTCCTATTCTTCTAGTTCTTCAGGTGAT
GAAAGGCGTAAGAAGAGGAAGAGGTCAACTAAGAAAGAAAGCAGTCGACATGGGAAGAAA
AAAGGCAGAAAGAGCACGAGTAGAAAAGTTCATCGAAATAAAAGATCGAGACGCAAGCGG
AGCTCTGAGAGTTCTAGTGACACAGACAGTCAGAGCATGAGCAGCAGCAGTGATAGCTCC
GATGATGAAAATGGCAGGCCCAATATTTCTGCACAAAAAGGTTTGGTGAAGAAATCATCA
AACCCTGTCAAAGAACAAGCTGTTTTGAAGCAGCAACAGAATCTTGAAGAGGGTGAAATA
TCTAAGAACGGTAAGCTTCCAAATAATGGTCATGGTGGAGATGTACAAACTGACAGGACT
CTCGCCACAAATCATCAATCTGACAATTCGGGCAGATCCAGGAGCGCAACACCAAGTCCT
AAGGGAAAGCCAAGACCCAGCCGCAGGAGCAGTCAAAGTATGAGCCCAGAAAAAGTACCT
GCTAGACTTGGTCAAAATGGTGGAAGTCTTCAAATTGAATCAAAGGAGAAAAGTCTTTCA
AAAAGTCCTTCACCAAAAGCTACTCAGCCATCTCGCTCTAGTCCTGGCAGGGATTTATCC
AGAAACCGTTCTCCAGATGGAACTTTAAAACGAGTCCGTAAAGGCCGTGGCTTCACTGAT
CGTTATTCATTTGCAAGACGCTATCGCACCCCATCTCCTGAGCGTTCATCCTATAGGCCT
TATAACCAGGGTGGGAGAAATTTTCAGGGGAATCGTGATAGGTACTCAAGCTATAGAAGC
TATTCTGGTCGCTCTCCACAGGGACGGTACAGACGGTCACCAAGAGGCAGAAGTCCCCCC
AGATACCAGCGCAGGAGTCGGAGTAGGAGTGTTTCTCACAGCCCTAGGCGTGAGAGTCGT
CGAAGTAGGAGCCCTTCACGCAGTCCTTCCCCCAGAGAAAAGCGGCAGACAATCAGTGAC
AGATTGAAGTCTCGTCTTGGGCCTCGTGTGGATGATCAGCATTCTATTCCGACTAGGAGG
TCAGCCTCAAGATCTAGAAGCCGCGACTCTACGACTCCTCGATCTCCTGCTGCTGCTCCA
AGGAAGCACAGTGGGAAAGTAGGATCTGCGTCACCTAATAGTTCGAGATCAACCTCCCCA
CCTCGACAGAGGGGTCTAGTCTCATATGAGGATATCAGTCCTACCGGGACAAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400033598
PEP Infomation

pacid=37458186 transcript=PGSC0003DMT400049782 locus=PGSC0003DMG400019339 ID=PGSC0003DMT400049782.v4.03 annot-version=v4.03
Sequence

MSKKKNPLVFLDVSIDGDTAEKIVIELFADTVPRTAENFRSLCTGEKGVGVSTGKPLHYK
GCLFHRVIKGFMAQGGDFSKGNGTGGESIYGGKFPDENFKVAHTEAGLLSMANSGPNTNG
SQFFIIFKRTPHLDGKHVVFGKVVKGMDLVKKIEQLGTDSGKPSGLVKIVDCGEMSEKKS
NDTSKAEKGKNKKSARALSSDDDSDSQEKGKRKSSTNRKKKKKRRYSSSDSYSSETDTDS
SSDSDSDSKLDSYSSSSSGDERRKKRKRSTKKESSRHGKKKGRKSTSRKVHRNKRSRRKR
SSESSSDTDSQSMSSSSDSSDDENGRPNISAQKGLVKKSSNPVKEQAVLKQQQNLEEGEI
SKNGKLPNNGHGGDVQTDRTLATNHQSDNSGRSRSATPSPKGKPRPSRRSSQSMSPEKVP
ARLGQNGGSLQIESKEKSLSKSPSPKATQPSRSSPGRDLSRNRSPDGTLKRVRKGRGFTD
RYSFARRYRTPSPERSSYRPYNQGGRNFQGNRDRYSSYRSYSGRSPQGRYRRSPRGRSPP
RYQRRSRSRSVSHSPRRESRRSRSPSRSPSPREKRQTISDRLKSRLGPRVDDQHSIPTRR
SASRSRSRDSTTPRSPAAAPRKHSGKVGSASPNSSRSTSPPRQRGLVSYEDISPTGTN*

Transcript Sequence

Transcript ID

PGSC0003DMT400049782
Transcript Infomation

pacid=37458186 locus=PGSC0003DMG400019339 ID=PGSC0003DMT400049782.v4.03 annot-version=v4.03
Sequence

ATGAGTAAGAAGAAAAACCCTCTTGTATTCTTAGATGTATCAATTGATGGAGATACTGCA
GAAAAAATTGTTATTGAGCTCTTTGCAGATACTGTCCCAAGGACTGCAGAAAATTTCCGG
TCGCTCTGCACAGGTGAGAAGGGAGTTGGAGTATCTACTGGAAAACCTCTGCACTACAAA
GGATGCTTATTTCACCGTGTAATAAAAGGGTTTATGGCACAAGGTGGTGATTTCTCCAAA
GGGAATGGCACTGGTGGAGAGAGTATATATGGAGGGAAATTTCCAGATGAAAACTTCAAA
GTTGCCCACACTGAAGCTGGTCTTCTCTCGATGGCAAATAGTGGTCCTAATACAAATGGA
TCCCAGTTCTTCATTATATTTAAGAGAACTCCCCATCTCGACGGGAAGCATGTTGTTTTT
GGGAAAGTTGTAAAGGGAATGGATTTAGTGAAGAAAATTGAACAGCTGGGAACAGACAGT
GGGAAGCCATCTGGGCTTGTGAAAATTGTGGATTGTGGCGAAATGTCTGAGAAGAAAAGT
AATGATACATCCAAAGCAGAGAAAGGGAAAAATAAGAAGTCCGCGAGAGCTCTTTCCTCT
GATGATGATTCAGACAGTCAAGAAAAGGGGAAACGCAAATCATCCACCAATAGAAAGAAA
AAGAAAAAGAGGAGATACTCTTCATCTGATTCTTACAGTTCTGAGACAGATACTGATTCC
TCTTCAGACTCTGACTCAGATTCTAAGCTGGACTCCTATTCTTCTAGTTCTTCAGGTGAT
GAAAGGCGTAAGAAGAGGAAGAGGTCAACTAAGAAAGAAAGCAGTCGACATGGGAAGAAA
AAAGGCAGAAAGAGCACGAGTAGAAAAGTTCATCGAAATAAAAGATCGAGACGCAAGCGG
AGCTCTGAGAGTTCTAGTGACACAGACAGTCAGAGCATGAGCAGCAGCAGTGATAGCTCC
GATGATGAAAATGGCAGGCCCAATATTTCTGCACAAAAAGGTTTGGTGAAGAAATCATCA
AACCCTGTCAAAGAACAAGCTGTTTTGAAGCAGCAACAGAATCTTGAAGAGGGTGAAATA
TCTAAGAACGGTAAGCTTCCAAATAATGGTCATGGTGGAGATGTACAAACTGACAGGACT
CTCGCCACAAATCATCAATCTGACAATTCGGGCAGATCCAGGAGCGCAACACCAAGTCCT
AAGGGAAAGCCAAGACCCAGCCGCAGGAGCAGTCAAAGTATGAGCCCAGAAAAAGTACCT
GCTAGACTTGGTCAAAATGGTGGAAGTCTTCAAATTGAATCAAAGGAGAAAAGTCTTTCA
AAAAGTCCTTCACCAAAAGCTACTCAGCCATCTCGCTCTAGTCCTGGCAGGGATTTATCC
AGAAACCGTTCTCCAGATGGAACTTTAAAACGAGTCCGTAAAGGCCGTGGCTTCACTGAT
CGTTATTCATTTGCAAGACGCTATCGCACCCCATCTCCTGAGCGTTCATCCTATAGGCCT
TATAACCAGGGTGGGAGAAATTTTCAGGGGAATCGTGATAGGTACTCAAGCTATAGAAGC
TATTCTGGTCGCTCTCCACAGGGACGGTACAGACGGTCACCAAGAGGCAGAAGTCCCCCC
AGATACCAGCGCAGGAGTCGGAGTAGGAGTGTTTCTCACAGCCCTAGGCGTGAGAGTCGT
CGAAGTAGGAGCCCTTCACGCAGTCCTTCCCCCAGAGAAAAGCGGCAGACAATCAGTGAC
AGATTGAAGTCTCGTCTTGGGCCTCGTGTGGATGATCAGCATTCTATTCCGACTAGGAGG
TCAGCCTCAAGATCTAGAAGCCGCGACTCTACGACTCCTCGATCTCCTGCTGCTGCTCCA
AGGAAGCACAGTGGGAAAGTAGGATCTGCGTCACCTAATAGTTCGAGATCAACCTCCCCA
CCTCGACAGAGGGGTCTAGTCTCATATGAGGATATCAGTCCTACCGGGACAAACTAA