Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049767
CDS Infomation

pacid=37457985 polypeptide=PGSC0003DMP400033589 locus=PGSC0003DMG400019333 ID=PGSC0003DMT400049767.v4.03 annot-version=v4.03
Sequence

ATGGCGTTGGAACAAACAATTGCATTCACTAACCCTTTCTTCTCTACAACTCCAAGAACC
CCTGCCAAATCTCACTCTTTTCGATTTTTCTCTCCATCCAAGCAAGTAGAAACCGCGAAA
TTAGCTTCGGGTTGTCGTATAAGATGTTCATTTGAGTATAATAATAGTTCTGGAATTGGA
AACGGTAGTGTGTATGAGTATGAAAGGTATGCTGGGGTTTCTCAGTACCCACGGCCTTCG
GAAGTACAGTGGAAGAAGGAGCTTTGTAATTCAGTGCAGCTTATTGGTAATGTTGCAGTG
CCGGTTCAAATTAAGCATCTTAATTCCGGAAAGGTTGTAGCTTGGACTCGTCTTGCTGTA
AGGAAGTCGCAAAACGACACTACTTGGATTAATTTGACATTTTGGGATGACTTGGCTAAT
GTTGCCAATCAACATGTAGAAAAAGGACAGCAGATATATGTGTCTGGCCGCCTAATATCA
GATACAGTTGAAGGTGATGATGGAAAAGAACAGACTTATTATAAGGTGGTCGTTCAGCAA
TTGAATTTTGTTGAGAAGAACTCTCCTCCAATGGCCTCGTATAATGGGGATTCTAATTCC
ATGGCACCACGTAAAAAGCAAAATAATTATGCTGCAAATACCACTGGATCCACAGAGGAG
CTATGGCAAGCTTTCTTTGCTAATCCACTAGAATGGTGGGATAATAGGAAGAACAAGAGG
AGTCCAAACTATCCAGACTTCAAGCACAAAGATACAGGTGAAGCATTGTGGGTAGAAGGC
AGGTATAATCCAACATGGGTGAAATCTCAACTTGCAGTACTGGATTCAAAGATGGAGTCT
TTTCATGATCAAAATGGCAGCAGAAATGCAGAGTTCATGTCCATGGATAATTTCCAATTT
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400033589
PEP Infomation

pacid=37457985 transcript=PGSC0003DMT400049767 locus=PGSC0003DMG400019333 ID=PGSC0003DMT400049767.v4.03 annot-version=v4.03
Sequence

MALEQTIAFTNPFFSTTPRTPAKSHSFRFFSPSKQVETAKLASGCRIRCSFEYNNSSGIG
NGSVYEYERYAGVSQYPRPSEVQWKKELCNSVQLIGNVAVPVQIKHLNSGKVVAWTRLAV
RKSQNDTTWINLTFWDDLANVANQHVEKGQQIYVSGRLISDTVEGDDGKEQTYYKVVVQQ
LNFVEKNSPPMASYNGDSNSMAPRKKQNNYAANTTGSTEELWQAFFANPLEWWDNRKNKR
SPNYPDFKHKDTGEALWVEGRYNPTWVKSQLAVLDSKMESFHDQNGSRNAEFMSMDNFQF
*

Transcript Sequence

Transcript ID

PGSC0003DMT400049767
Transcript Infomation

pacid=37457985 locus=PGSC0003DMG400019333 ID=PGSC0003DMT400049767.v4.03 annot-version=v4.03
Sequence

ATGGCGTTGGAACAAACAATTGCATTCACTAACCCTTTCTTCTCTACAACTCCAAGAACC
CCTGCCAAATCTCACTCTTTTCGATTTTTCTCTCCATCCAAGCAAGTAGAAACCGCGAAA
TTAGCTTCGGGTTGTCGTATAAGATGTTCATTTGAGTATAATAATAGTTCTGGAATTGGA
AACGGTAGTGTGTATGAGTATGAAAGGTATGCTGGGGTTTCTCAGTACCCACGGCCTTCG
GAAGTACAGTGGAAGAAGGAGCTTTGTAATTCAGTGCAGCTTATTGGTAATGTTGCAGTG
CCGGTTCAAATTAAGCATCTTAATTCCGGAAAGGTTGTAGCTTGGACTCGTCTTGCTGTA
AGGAAGTCGCAAAACGACACTACTTGGATTAATTTGACATTTTGGGATGACTTGGCTAAT
GTTGCCAATCAACATGTAGAAAAAGGACAGCAGATATATGTGTCTGGCCGCCTAATATCA
GATACAGTTGAAGGTGATGATGGAAAAGAACAGACTTATTATAAGGTGGTCGTTCAGCAA
TTGAATTTTGTTGAGAAGAACTCTCCTCCAATGGCCTCGTATAATGGGGATTCTAATTCC
ATGGCACCACGTAAAAAGCAAAATAATTATGCTGCAAATACCACTGGATCCACAGAGGAG
CTATGGCAAGCTTTCTTTGCTAATCCACTAGAATGGTGGGATAATAGGAAGAACAAGAGG
AGTCCAAACTATCCAGACTTCAAGCACAAAGATACAGGTGAAGCATTGTGGGTAGAAGGC
AGGTATAATCCAACATGGGTGAAATCTCAACTTGCAGTACTGGATTCAAAGATGGAGTCT
TTTCATGATCAAAATGGCAGCAGAAATGCAGAGTTCATGTCCATGGATAATTTCCAATTT
TAG