Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400049657
CDS Infomation

pacid=37433317 polypeptide=PGSC0003DMP400033516 locus=PGSC0003DMG400019289 ID=PGSC0003DMT400049657.v4.03 annot-version=v4.03
Sequence

ATGGCGGTCTTATGCTGCGCCACCTCTGCTTATCCTACGCTTTCTCTGAGAGTAACTTCT
GCTAAAGTTCCAGTGTGTTCGAGCTCTCGAGTTTCAGTTCCTCAGCTGCATCATTCCGAT
TCCCCGTTTGTTCCCGAGGTTAACAAGGCTGTTGATTCTTTGTCAAAAGAGTTCAGAGAA
GTTGACAATTTAGTGGCACGCAATACTGCACGAGTTTTGAGAGCTTTCCAAAGGGTCAAG
GTTGGGTCTCATCACTTTGGTGGTAGCACTGGCTATGGTCATGAAGAAGCTGGTGGGCGT
GAAGCCTTGGACCAGGCTTTTGCAGAAATTGTTGGGGCTGAGTCTGCAATTGTTCGATCA
CAGTTCTTCTCAGGTACTCATGCAATCACTTGTGCCTTATTTGCTTTCTTAAGACCAGGG
GATGAGCTGTTAGCGATAGCTGGTGCACCTTATGATACGCTGGAGGAAGTAATTGGAAAA
AGGGACTCTGGTGGATTGGGTTCCTTGAAAGACTTTGGAGTAGAATACCGGGAAGTCCCA
CTTGCAGAGGATGGCGGGCTTGATTGGGATGCACTTAAAACCTCTATAAGACCTCACACT
AAGTGTGCACTCATACAGAGATCATGTGGTTATTCCTGGCGTCGCAGTTTGAGTGTAACT
GAGATAGGTCGGGCAATCAATATAATCAAGACGCAGAACCCAGGCTGCATGGTCATGGTA
GATAACTGCTATGGTGAATTTGTTGACGACATCGAACCTCCTATGGTGGGTGCTGACCTA
ATTGCGGGAAGTTTAATAAAAAATCCGGGTGGAACGATTGCACCATGTGGTGGATATGTT
GCGGGAAGGAAAAGATGGGTAGAAGCAGCAGCTTCCCGTCTCTCTGCCCCAGGACTTGGA
GTTGATTGCGGTTCTACCCCTGGTGATATAATGAGAACTTTATTTCAGGGTTTATTCCTC
TCACCTCAAATGGTTGGTGAAGCAATAAAGGGAAGCTTCCTGATAGCTGAAGTCATGGCA
GCTAAAGGATATAAAGTGCAGCCACTTTGCCGGATCAAGCGTCATGATACAGTGCAGGCT
GTACAACTTGGAAACCGTGAGCGTCTACTTTCCTTTTGCGAGGCTGTTCAGAGAAGTTCT
CCTGTTAGCTCTTTTATCAGGCCTGTTGCAGGTGCAACTGCTGGCTATGCATCCGAGGTC
ATTTTTGCTGATGGAACCTTCATTGATGGAAGTACTAGCGAGCTCTCATGTGATGGACCA
CTAAGAGAGCCTTTCTCTGTTTTCTGTCAGGGTGGCACTCATTGGACGCAGTGGGGACTA
GTTCTGGGGGAGGTTTTGAAATCTCTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400033516
PEP Infomation

pacid=37433317 transcript=PGSC0003DMT400049657 locus=PGSC0003DMG400019289 ID=PGSC0003DMT400049657.v4.03 annot-version=v4.03
Sequence

MAVLCCATSAYPTLSLRVTSAKVPVCSSSRVSVPQLHHSDSPFVPEVNKAVDSLSKEFRE
VDNLVARNTARVLRAFQRVKVGSHHFGGSTGYGHEEAGGREALDQAFAEIVGAESAIVRS
QFFSGTHAITCALFAFLRPGDELLAIAGAPYDTLEEVIGKRDSGGLGSLKDFGVEYREVP
LAEDGGLDWDALKTSIRPHTKCALIQRSCGYSWRRSLSVTEIGRAINIIKTQNPGCMVMV
DNCYGEFVDDIEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGRKRWVEAAASRLSAPGLG
VDCGSTPGDIMRTLFQGLFLSPQMVGEAIKGSFLIAEVMAAKGYKVQPLCRIKRHDTVQA
VQLGNRERLLSFCEAVQRSSPVSSFIRPVAGATAGYASEVIFADGTFIDGSTSELSCDGP
LREPFSVFCQGGTHWTQWGLVLGEVLKSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400049657
Transcript Infomation

pacid=37433317 locus=PGSC0003DMG400019289 ID=PGSC0003DMT400049657.v4.03 annot-version=v4.03
Sequence

ATGGCGGTCTTATGCTGCGCCACCTCTGCTTATCCTACGCTTTCTCTGAGAGTAACTTCT
GCTAAAGTTCCAGTGTGTTCGAGCTCTCGAGTTTCAGTTCCTCAGCTGCATCATTCCGAT
TCCCCGTTTGTTCCCGAGGTTAACAAGGCTGTTGATTCTTTGTCAAAAGAGTTCAGAGAA
GTTGACAATTTAGTGGCACGCAATACTGCACGAGTTTTGAGAGCTTTCCAAAGGGTCAAG
GTTGGGTCTCATCACTTTGGTGGTAGCACTGGCTATGGTCATGAAGAAGCTGGTGGGCGT
GAAGCCTTGGACCAGGCTTTTGCAGAAATTGTTGGGGCTGAGTCTGCAATTGTTCGATCA
CAGTTCTTCTCAGGTACTCATGCAATCACTTGTGCCTTATTTGCTTTCTTAAGACCAGGG
GATGAGCTGTTAGCGATAGCTGGTGCACCTTATGATACGCTGGAGGAAGTAATTGGAAAA
AGGGACTCTGGTGGATTGGGTTCCTTGAAAGACTTTGGAGTAGAATACCGGGAAGTCCCA
CTTGCAGAGGATGGCGGGCTTGATTGGGATGCACTTAAAACCTCTATAAGACCTCACACT
AAGTGTGCACTCATACAGAGATCATGTGGTTATTCCTGGCGTCGCAGTTTGAGTGTAACT
GAGATAGGTCGGGCAATCAATATAATCAAGACGCAGAACCCAGGCTGCATGGTCATGGTA
GATAACTGCTATGGTGAATTTGTTGACGACATCGAACCTCCTATGGTGGGTGCTGACCTA
ATTGCGGGAAGTTTAATAAAAAATCCGGGTGGAACGATTGCACCATGTGGTGGATATGTT
GCGGGAAGGAAAAGATGGGTAGAAGCAGCAGCTTCCCGTCTCTCTGCCCCAGGACTTGGA
GTTGATTGCGGTTCTACCCCTGGTGATATAATGAGAACTTTATTTCAGGGTTTATTCCTC
TCACCTCAAATGGTTGGTGAAGCAATAAAGGGAAGCTTCCTGATAGCTGAAGTCATGGCA
GCTAAAGGATATAAAGTGCAGCCACTTTGCCGGATCAAGCGTCATGATACAGTGCAGGCT
GTACAACTTGGAAACCGTGAGCGTCTACTTTCCTTTTGCGAGGCTGTTCAGAGAAGTTCT
CCTGTTAGCTCTTTTATCAGGCCTGTTGCAGGTGCAACTGCTGGCTATGCATCCGAGGTC
ATTTTTGCTGATGGAACCTTCATTGATGGAAGTACTAGCGAGCTCTCATGTGATGGACCA
CTAAGAGAGCCTTTCTCTGTTTTCTGTCAGGGTGGCACTCATTGGACGCAGTGGGGACTA
GTTCTGGGGGAGGTTTTGAAATCTCTATGA